Wall clock time and date at job start Tue Mar 9 2021 12:55:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34228 * 117.00083 * 2 1 4 4 O 1.20816 * 120.00198 * 359.97438 * 3 2 1 5 5 C 1.50705 * 119.99732 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.85032 * 48.80674 * 5 3 2 7 7 C 1.53782 * 113.61232 * 180.02562 * 5 3 2 8 8 C 1.53778 * 87.08301 * 139.97925 * 7 5 3 9 9 C 1.52997 * 113.61211 * 89.11533 * 8 7 5 10 10 N 1.46498 * 109.47536 * 60.31546 * 9 8 7 11 11 C 1.34771 * 120.00552 * 175.25675 * 10 9 8 12 12 O 1.21707 * 119.99987 * 359.97438 * 11 10 9 13 13 C 1.46425 * 120.00416 * 180.02562 * 11 10 9 14 14 C 1.34812 * 120.00363 * 179.97438 * 13 11 10 15 15 C 1.47209 * 120.00029 * 179.97438 * 14 13 11 16 16 C 1.39836 * 120.17094 * 0.31876 * 15 14 13 17 17 C 1.37888 * 119.82446 * 180.23129 * 16 15 14 18 18 C 1.38407 * 120.17207 * 359.47213 * 17 16 15 19 19 C 1.50697 * 119.82953 * 180.27800 * 18 17 16 20 20 O 1.42895 * 109.47103 * 300.00307 * 19 18 17 21 21 Si 1.86298 * 109.47274 * 179.97438 * 19 18 17 22 22 C 1.38397 * 120.34075 * 0.25740 * 18 17 16 23 23 C 1.37889 * 120.17590 * 359.97438 * 22 18 17 24 24 O 1.42896 * 113.61500 * 219.93105 * 8 7 5 25 25 C 1.42901 * 113.99761 * 163.27388 * 24 8 7 26 26 C 1.53782 * 113.61261 * 277.49439 * 5 3 2 27 27 H 1.09004 * 109.47528 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47286 * 300.00022 * 1 2 3 29 29 H 1.09001 * 109.47351 * 60.00149 * 1 2 3 30 30 H 1.09000 * 113.61629 * 25.42746 * 7 5 3 31 31 H 1.08999 * 113.68923 * 254.54345 * 7 5 3 32 32 H 1.09000 * 109.47315 * 300.31479 * 9 8 7 33 33 H 1.09002 * 109.47313 * 180.31426 * 9 8 7 34 34 H 0.96996 * 119.99859 * 355.25525 * 10 9 8 35 35 H 1.08004 * 120.00186 * 359.97438 * 13 11 10 36 36 H 1.08003 * 119.99567 * 0.02562 * 14 13 11 37 37 H 1.08001 * 120.08516 * 359.97438 * 16 15 14 38 38 H 1.08000 * 119.91329 * 179.74947 * 17 16 15 39 39 H 1.09007 * 109.46780 * 60.00127 * 19 18 17 40 40 H 0.96701 * 114.00226 * 179.97438 * 20 19 18 41 41 H 1.48497 * 109.99552 * 60.00083 * 21 19 18 42 42 H 1.48498 * 109.99719 * 181.31794 * 21 19 18 43 43 H 1.08003 * 119.91318 * 180.02562 * 22 18 17 44 44 H 1.08003 * 120.08603 * 180.02562 * 23 22 18 45 45 H 1.09003 * 109.46847 * 176.35891 * 25 24 8 46 46 H 1.09006 * 109.47187 * 296.36090 * 25 24 8 47 47 H 1.08997 * 109.47494 * 56.36206 * 25 24 8 48 48 H 1.08999 * 113.61281 * 105.47633 * 26 5 3 49 49 H 1.08998 * 113.61569 * 334.57168 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0233 0.6364 -0.7567 7 6 4.1078 2.7141 0.0001 8 6 5.1815 2.2261 0.9870 9 6 6.4442 1.6950 0.3055 10 7 7.0496 2.7594 -0.4987 11 6 8.2290 2.5495 -1.1163 12 8 8.7913 1.4758 -1.0056 13 6 8.8344 3.6135 -1.9196 14 6 10.0144 3.4038 -2.5370 15 6 10.6227 4.4733 -3.3450 16 6 9.9830 5.7106 -3.4692 17 6 10.5568 6.7058 -4.2318 18 6 11.7681 6.4864 -4.8645 19 6 12.3914 7.5816 -5.6909 20 8 11.5048 7.9405 -6.7525 21 14 14.0040 6.9803 -6.4040 22 6 12.4101 5.2665 -4.7417 23 6 11.8467 4.2597 -3.9866 24 8 5.4653 3.1590 2.0315 25 6 6.1579 2.5915 3.1452 26 6 4.1916 1.1231 1.3962 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 3.4175 3.4401 0.4297 31 1 4.5106 3.0309 -0.9619 32 1 6.1834 0.8560 -0.3395 33 1 7.1541 1.3637 1.0634 34 1 6.6017 3.6152 -0.5867 35 1 8.3357 4.5665 -2.0176 36 1 10.5129 2.4507 -2.4393 37 1 9.0399 5.8848 -2.9725 38 1 10.0620 7.6606 -4.3320 39 1 12.5752 8.4521 -5.0610 40 1 11.8419 8.6421 -7.3263 41 1 13.7675 5.7934 -7.2645 42 1 14.6441 8.0618 -7.1951 43 1 13.3553 5.1029 -5.2380 44 1 12.3491 3.3084 -3.8914 45 1 6.3928 3.3758 3.8649 46 1 5.5279 1.8393 3.6200 47 1 7.0815 2.1267 2.8002 48 1 4.6621 0.1538 1.5610 49 1 3.5243 1.4143 2.2073 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:19 Heat of formation + Delta-G solvation = -115.667539 kcal Electronic energy + Delta-G solvation = -31195.121110 eV Core-core repulsion = 26669.876483 eV Total energy + Delta-G solvation = -4525.244628 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.26461 -40.99942 -40.61663 -40.00667 -37.89603 -37.66587 -36.85824 -35.45140 -35.11150 -32.12576 -31.62608 -29.96193 -28.71152 -28.20946 -27.19138 -26.66315 -25.60717 -24.06483 -23.59904 -22.08357 -21.86247 -20.66470 -19.99558 -19.21196 -18.67170 -18.46113 -18.14159 -17.67196 -17.48500 -17.06012 -16.78855 -16.64924 -16.35760 -16.22035 -16.02804 -15.98104 -15.47017 -15.28466 -15.12179 -14.62399 -14.49868 -14.37371 -14.27742 -14.09097 -13.89418 -13.76484 -13.66094 -13.41013 -13.31193 -13.16374 -13.12185 -12.74607 -12.69798 -12.24529 -12.18764 -12.07043 -11.80879 -11.76024 -11.56208 -11.46070 -11.31291 -11.00945 -10.68605 -10.55300 -10.14885 -10.00077 -9.24039 -5.01309 -0.54148 0.37527 0.91124 1.11429 1.22655 1.55022 1.61509 1.91164 2.02840 2.29669 2.62516 2.76442 3.05714 3.11514 3.25809 3.27288 3.35039 3.57268 3.69748 3.78637 3.84450 3.90895 3.96667 4.10785 4.14319 4.14890 4.18812 4.22566 4.24203 4.28740 4.35310 4.36865 4.44394 4.46633 4.46722 4.51837 4.58435 4.69783 4.75130 4.76774 4.84659 4.91779 4.97625 5.06745 5.12048 5.31484 5.35122 5.38433 5.46006 5.60223 5.86072 6.01395 6.36306 6.47399 6.69687 7.22639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.501 6.501 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.100 4.100 8 C 0.076 3.924 9 C 0.114 3.886 10 N -0.720 5.720 11 C 0.549 3.451 12 O -0.544 6.544 13 C -0.216 4.216 14 C -0.013 4.013 15 C -0.075 4.075 16 C -0.099 4.099 17 C -0.094 4.094 18 C -0.061 4.061 19 C -0.079 4.079 20 O -0.536 6.536 21 Si 0.682 3.318 22 C -0.117 4.117 23 C -0.087 4.087 24 O -0.362 6.362 25 C 0.025 3.975 26 C -0.136 4.136 27 H 0.104 0.896 28 H 0.064 0.936 29 H 0.064 0.936 30 H 0.113 0.887 31 H 0.089 0.911 32 H 0.083 0.917 33 H 0.081 0.919 34 H 0.406 0.594 35 H 0.131 0.869 36 H 0.138 0.862 37 H 0.130 0.870 38 H 0.128 0.872 39 H 0.079 0.921 40 H 0.381 0.619 41 H -0.254 1.254 42 H -0.260 1.260 43 H 0.131 0.869 44 H 0.135 0.865 45 H 0.090 0.910 46 H 0.046 0.954 47 H 0.046 0.954 48 H 0.092 0.908 49 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.549 0.710 1.737 2.433 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.138 4.138 8 C 0.035 3.965 9 C -0.010 4.010 10 N -0.372 5.372 11 C 0.339 3.661 12 O -0.423 6.423 13 C -0.236 4.236 14 C -0.032 4.032 15 C -0.075 4.075 16 C -0.117 4.117 17 C -0.112 4.112 18 C -0.061 4.061 19 C -0.189 4.189 20 O -0.343 6.343 21 Si 0.583 3.417 22 C -0.135 4.135 23 C -0.105 4.105 24 O -0.281 6.281 25 C -0.072 4.072 26 C -0.174 4.174 27 H 0.122 0.878 28 H 0.083 0.917 29 H 0.083 0.917 30 H 0.132 0.868 31 H 0.107 0.893 32 H 0.101 0.899 33 H 0.100 0.900 34 H 0.241 0.759 35 H 0.148 0.852 36 H 0.156 0.844 37 H 0.148 0.852 38 H 0.146 0.854 39 H 0.097 0.903 40 H 0.229 0.771 41 H -0.179 1.179 42 H -0.186 1.186 43 H 0.148 0.852 44 H 0.153 0.847 45 H 0.109 0.891 46 H 0.064 0.936 47 H 0.065 0.935 48 H 0.111 0.889 49 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 1.737 -0.203 1.375 2.225 hybrid contribution -1.080 1.034 -0.686 1.645 sum 0.656 0.831 0.689 1.264 Atomic orbital electron populations 1.23336 0.75801 1.04076 1.02773 1.86511 1.23820 1.33181 1.83800 1.23349 0.91398 0.81510 0.72269 1.90695 1.66881 1.36390 1.44788 1.22313 0.88140 1.00983 1.01378 0.85043 1.23065 0.96124 0.95181 0.99397 1.23047 0.92519 0.91193 0.89712 1.21566 0.93679 0.90621 0.95110 1.45708 1.22713 1.17568 1.51240 1.18330 0.80467 0.87889 0.79423 1.90841 1.62279 1.26553 1.62665 1.22856 0.98582 0.99641 1.02535 1.22404 0.93333 0.97413 0.90080 1.19055 0.95571 0.93857 0.99014 1.21454 0.99740 0.92417 0.98072 1.20941 0.94612 0.99619 0.95990 1.19436 0.95729 0.93899 0.97021 1.24842 1.02678 0.99624 0.91710 1.86583 1.44677 1.59889 1.43161 0.95055 0.78834 0.80941 0.86889 1.20901 1.00002 0.92623 0.99925 1.21320 0.94328 0.99189 0.95633 1.87999 1.77219 1.34780 1.28094 1.22824 0.95878 0.99918 0.88532 1.23495 0.97919 1.00455 0.95538 0.87778 0.91704 0.91680 0.86827 0.89251 0.89874 0.90050 0.75885 0.85153 0.84398 0.85182 0.85358 0.90340 0.77108 1.17894 1.18564 0.85152 0.84735 0.89150 0.93563 0.93506 0.88943 0.87852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.44 10.56 -39.25 -0.41 -0.85 16 3 C 0.47 0.75 7.48 36.01 0.27 1.02 16 4 O -0.50 -2.23 15.65 -18.74 -0.29 -2.53 16 5 C -0.11 0.14 3.91 -90.96 -0.36 -0.22 16 6 H 0.13 -0.38 7.65 -51.93 -0.40 -0.77 16 7 C -0.10 0.12 6.53 -25.92 -0.17 -0.05 16 8 C 0.08 -0.10 0.89 -89.83 -0.08 -0.18 16 9 C 0.11 -0.10 5.01 -4.04 -0.02 -0.12 16 10 N -0.72 0.40 5.24 -61.70 -0.32 0.08 16 11 C 0.55 1.01 7.74 -12.97 -0.10 0.91 16 12 O -0.54 -3.02 16.23 5.18 0.08 -2.94 16 13 C -0.22 0.01 9.41 -37.50 -0.35 -0.35 16 14 C -0.01 -0.01 9.46 -37.15 -0.35 -0.36 16 15 C -0.07 -0.03 5.87 -105.06 -0.62 -0.65 16 16 C -0.10 -0.01 9.41 -39.11 -0.37 -0.37 16 17 C -0.09 -0.06 9.59 -39.65 -0.38 -0.44 16 18 C -0.06 -0.05 5.43 -104.50 -0.57 -0.61 16 19 C -0.08 0.04 2.81 36.00 0.10 0.14 16 20 O -0.54 -0.45 12.74 -35.23 -0.45 -0.90 16 21 Si 0.68 -0.80 29.77 -169.99 -5.06 -5.86 16 22 C -0.12 -0.01 8.65 -39.65 -0.34 -0.35 16 23 C -0.09 0.00 9.80 -39.11 -0.38 -0.38 16 24 O -0.36 -0.09 10.64 -35.23 -0.37 -0.46 16 25 C 0.02 -0.03 10.63 101.05 1.07 1.04 16 26 C -0.14 0.26 6.21 -25.94 -0.16 0.10 16 27 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 28 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.11 0.06 7.44 -51.93 -0.39 -0.33 16 31 H 0.09 -0.21 7.38 -51.93 -0.38 -0.59 16 32 H 0.08 -0.10 7.34 -51.93 -0.38 -0.48 16 33 H 0.08 0.00 6.50 -51.93 -0.34 -0.34 16 34 H 0.41 -0.95 7.76 -40.82 -0.32 -1.26 16 35 H 0.13 -0.32 6.07 -52.48 -0.32 -0.63 16 36 H 0.14 0.11 7.52 -52.48 -0.39 -0.29 16 37 H 0.13 -0.26 6.17 -52.49 -0.32 -0.58 16 38 H 0.13 -0.02 8.06 -52.49 -0.42 -0.45 16 39 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 40 H 0.38 -1.17 8.74 45.56 0.40 -0.77 16 41 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 42 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 43 H 0.13 -0.23 4.85 -52.48 -0.25 -0.48 16 44 H 0.13 -0.27 8.06 -52.48 -0.42 -0.69 16 45 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 46 H 0.05 -0.10 7.67 -51.93 -0.40 -0.50 16 47 H 0.05 -0.07 6.49 -51.93 -0.34 -0.41 16 48 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 49 H 0.10 -0.13 8.09 -51.93 -0.42 -0.55 16 LS Contribution 408.84 15.07 6.16 6.16 Total: 0.00 -10.54 408.84 -9.23 -19.76 By element: Atomic # 1 Polarization: -5.81 SS G_CDS: -6.82 Total: -12.63 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -1.74 Total: 0.16 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: -0.32 Total: 0.08 kcal Atomic # 8 Polarization: -6.23 SS G_CDS: -1.45 Total: -7.68 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.06 Total: -5.86 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -10.54 -9.23 -19.76 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.905 kcal (2) G-P(sol) polarization free energy of solvation -10.535 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.440 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.227 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.763 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.668 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds