Wall clock time and date at job start Tue Mar 9 2021 12:56:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34223 * 116.99477 * 2 1 4 4 O 1.20826 * 120.00619 * 359.97438 * 3 2 1 5 5 C 1.50710 * 119.99552 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.84651 * 311.18785 * 5 3 2 7 7 C 1.53778 * 113.69222 * 82.46139 * 5 3 2 8 8 C 1.53779 * 87.08016 * 139.99317 * 7 5 3 9 9 C 1.52995 * 113.61742 * 89.11655 * 8 7 5 10 10 N 1.46500 * 109.47274 * 77.41991 * 9 8 7 11 11 C 1.34770 * 120.00418 * 175.65790 * 10 9 8 12 12 O 1.21593 * 119.99937 * 359.97438 * 11 10 9 13 13 C 1.47599 * 120.00358 * 180.02562 * 11 10 9 14 14 C 1.39709 * 120.08639 * 359.72206 * 13 11 10 15 15 C 1.37734 * 119.90837 * 179.72068 * 14 13 11 16 16 C 1.50701 * 119.95185 * 180.29740 * 15 14 13 17 17 C 1.38971 * 120.08872 * 0.57937 * 15 14 13 18 18 O 1.35704 * 119.91228 * 179.69549 * 17 15 14 19 19 C 1.39019 * 120.17723 * 359.67477 * 17 15 14 20 20 C 1.50698 * 119.95595 * 180.02562 * 19 17 15 21 21 O 1.42895 * 109.47298 * 285.02069 * 20 19 17 22 22 Si 1.86302 * 109.47008 * 165.02288 * 20 19 17 23 23 C 1.37689 * 120.08556 * 0.04302 * 19 17 15 24 24 O 1.42898 * 113.61326 * 220.01924 * 8 7 5 25 25 C 1.42905 * 114.00291 * 161.10056 * 24 8 7 26 26 C 1.53781 * 87.08332 * 334.56656 * 8 7 5 27 27 H 1.08997 * 109.47273 * 60.00594 * 1 2 3 28 28 H 1.09008 * 109.46799 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.47135 * 299.99803 * 1 2 3 30 30 H 1.08997 * 113.61475 * 25.44406 * 7 5 3 31 31 H 1.09002 * 113.61436 * 254.54055 * 7 5 3 32 32 H 1.09002 * 109.47362 * 197.42205 * 9 8 7 33 33 H 1.08998 * 109.47038 * 317.42013 * 9 8 7 34 34 H 0.96999 * 119.99674 * 355.65678 * 10 9 8 35 35 H 1.08005 * 120.04553 * 359.97438 * 14 13 11 36 36 H 1.08991 * 109.47208 * 270.27916 * 16 15 14 37 37 H 1.09004 * 109.47154 * 30.28350 * 16 15 14 38 38 H 1.09004 * 109.46603 * 150.28018 * 16 15 14 39 39 H 0.96695 * 114.00689 * 269.97971 * 18 17 15 40 40 H 1.08997 * 109.46868 * 45.02482 * 20 19 17 41 41 H 0.96700 * 113.99877 * 60.00247 * 21 20 19 42 42 H 1.48500 * 110.00000 * 300.00112 * 22 20 19 43 43 H 1.48497 * 109.99903 * 61.31911 * 22 20 19 44 44 H 1.07997 * 120.04310 * 179.97438 * 23 19 17 45 45 H 1.09006 * 109.46775 * 304.58501 * 25 24 8 46 46 H 1.09002 * 109.46711 * 64.57899 * 25 24 8 47 47 H 1.09000 * 109.47332 * 184.58217 * 25 24 8 48 48 H 1.08997 * 113.61704 * 139.97793 * 26 8 7 49 49 H 1.08999 * 113.61545 * 270.80625 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 1 4.0239 0.6363 0.7550 7 6 4.1925 1.1230 -1.3969 8 6 5.1820 2.2265 -0.9869 9 6 6.4443 1.6953 -0.3048 10 7 7.3514 1.1461 -1.3157 11 6 8.5704 0.6984 -0.9554 12 8 8.9176 0.7507 0.2087 13 6 9.4844 0.1456 -1.9740 14 6 9.0855 0.0803 -3.3114 15 6 9.9436 -0.4310 -4.2598 16 6 9.5169 -0.4957 -5.7036 17 6 11.2000 -0.8925 -3.8860 18 8 12.0402 -1.4012 -4.8225 19 6 11.5987 -0.8341 -2.5555 20 6 12.9625 -1.3355 -2.1559 21 8 12.9652 -2.7644 -2.1615 22 14 13.3737 -0.7205 -0.4461 23 6 10.7489 -0.3191 -1.6023 24 8 5.4650 3.1588 -2.0321 25 6 6.0180 4.3946 -1.5748 26 6 4.1078 2.7143 -0.0005 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0278 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 3.5257 1.4141 -2.2084 31 1 4.6631 0.1537 -1.5613 32 1 6.9405 2.5083 0.2252 33 1 6.1727 0.9124 0.4033 34 1 7.0745 1.1047 -2.2444 35 1 8.1072 0.4339 -3.6018 36 1 9.0229 -1.4484 -5.8941 37 1 8.8261 0.3205 -5.9153 38 1 10.3931 -0.4059 -6.3458 39 1 11.9477 -2.3541 -4.9579 40 1 13.7062 -0.9679 -2.8629 41 1 12.7585 -3.1547 -3.0218 42 1 13.3741 0.7644 -0.4268 43 1 12.3851 -1.2408 0.5322 44 1 11.0592 -0.2745 -0.5689 45 1 5.3534 4.8377 -0.8331 46 1 6.9939 4.2115 -1.1250 47 1 6.1286 5.0772 -2.4175 48 1 4.5098 3.0294 0.9623 49 1 3.4186 3.4413 -0.4300 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:17 Heat of formation + Delta-G solvation = -180.180244 kcal Electronic energy + Delta-G solvation = -33710.993675 eV Core-core repulsion = 28992.495515 eV Total energy + Delta-G solvation = -4718.498160 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.33425 -41.75812 -40.87813 -40.08515 -37.78342 -37.71184 -37.67611 -36.90477 -35.62075 -34.10388 -32.17519 -29.93553 -28.57811 -28.29134 -28.17659 -26.94560 -26.76498 -25.82167 -24.34099 -22.32267 -22.12054 -21.49171 -20.28060 -19.65676 -19.30788 -18.84981 -18.27223 -18.01887 -17.79520 -17.50778 -17.03070 -16.80431 -16.75782 -16.39780 -16.25901 -16.11974 -15.97796 -15.54484 -15.39779 -14.93938 -14.80472 -14.58422 -14.50771 -14.30590 -14.05048 -13.93368 -13.77629 -13.63436 -13.47398 -13.35323 -13.08008 -13.04794 -12.88946 -12.83544 -12.71001 -12.34124 -12.23322 -12.08530 -11.83814 -11.63736 -11.48919 -11.30004 -11.13992 -11.04294 -10.77858 -10.31293 -10.05941 -9.78077 -4.80301 -0.50196 -0.01906 1.07298 1.36877 1.54414 1.59606 1.72886 1.82399 2.03088 2.47900 2.53837 2.89161 2.99037 3.10734 3.19927 3.23691 3.32767 3.46310 3.54860 3.75493 3.81242 3.87021 3.92296 4.05090 4.11777 4.15708 4.19718 4.20171 4.27073 4.31849 4.34750 4.40654 4.43448 4.45536 4.45696 4.52396 4.55012 4.56888 4.57531 4.69684 4.72859 4.88679 4.90451 4.98758 5.01099 5.15254 5.17195 5.31845 5.41165 5.93344 6.29252 6.31655 6.46165 6.66208 7.04864 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.110 4.110 6 H 0.132 0.868 7 C -0.101 4.101 8 C 0.075 3.925 9 C 0.115 3.885 10 N -0.717 5.717 11 C 0.561 3.439 12 O -0.533 6.533 13 C -0.134 4.134 14 C -0.067 4.067 15 C -0.111 4.111 16 C -0.115 4.115 17 C 0.145 3.855 18 O -0.488 6.488 19 C -0.141 4.141 20 C -0.079 4.079 21 O -0.530 6.530 22 Si 0.743 3.257 23 C -0.052 4.052 24 O -0.364 6.364 25 C 0.026 3.974 26 C -0.134 4.134 27 H 0.064 0.936 28 H 0.104 0.896 29 H 0.065 0.935 30 H 0.104 0.896 31 H 0.093 0.907 32 H 0.081 0.919 33 H 0.086 0.914 34 H 0.406 0.594 35 H 0.135 0.865 36 H 0.074 0.926 37 H 0.072 0.928 38 H 0.078 0.922 39 H 0.394 0.606 40 H 0.083 0.917 41 H 0.359 0.641 42 H -0.247 1.247 43 H -0.248 1.248 44 H 0.141 0.859 45 H 0.048 0.952 46 H 0.044 0.956 47 H 0.090 0.910 48 H 0.088 0.912 49 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.303 -2.431 -3.718 4.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.139 4.139 8 C 0.035 3.965 9 C -0.009 4.009 10 N -0.371 5.371 11 C 0.348 3.652 12 O -0.410 6.410 13 C -0.137 4.137 14 C -0.086 4.086 15 C -0.111 4.111 16 C -0.172 4.172 17 C 0.099 3.901 18 O -0.300 6.300 19 C -0.142 4.142 20 C -0.187 4.187 21 O -0.334 6.334 22 Si 0.641 3.359 23 C -0.070 4.070 24 O -0.283 6.283 25 C -0.070 4.070 26 C -0.172 4.172 27 H 0.083 0.917 28 H 0.122 0.878 29 H 0.083 0.917 30 H 0.122 0.878 31 H 0.112 0.888 32 H 0.099 0.901 33 H 0.104 0.896 34 H 0.242 0.758 35 H 0.153 0.847 36 H 0.093 0.907 37 H 0.091 0.909 38 H 0.097 0.903 39 H 0.252 0.748 40 H 0.101 0.899 41 H 0.205 0.795 42 H -0.171 1.171 43 H -0.172 1.172 44 H 0.158 0.842 45 H 0.067 0.933 46 H 0.063 0.937 47 H 0.109 0.891 48 H 0.107 0.893 49 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -0.279 -0.997 -1.815 2.089 hybrid contribution -1.581 -0.318 -1.570 2.250 sum -1.860 -1.315 -3.384 4.080 Atomic orbital electron populations 1.23342 0.75768 1.04092 1.02780 1.86513 1.23845 1.33131 1.83769 1.23329 0.91364 0.81521 0.72254 1.90696 1.66865 1.36423 1.44818 1.22334 0.88213 1.00914 1.01433 0.85012 1.23031 0.96675 0.98757 0.95409 1.23076 0.92300 0.91454 0.89688 1.21627 0.88831 0.99498 0.90934 1.45655 1.15434 1.63689 1.12278 1.18122 0.81279 0.77692 0.88057 1.90826 1.75474 1.55710 1.18997 1.19804 0.95582 1.04733 0.93623 1.21138 0.99291 0.96974 0.91157 1.20201 0.92903 1.00696 0.97342 1.20752 1.02597 1.02906 0.90895 1.18302 0.88392 0.96787 0.86596 1.84741 1.59402 1.28137 1.57671 1.20623 0.98032 1.02815 0.92728 1.25260 0.93449 0.84545 1.15473 1.86828 1.93438 1.17023 1.36119 0.93207 0.89506 0.78948 0.74236 1.21006 0.91990 0.94485 0.99533 1.87952 1.83247 1.25891 1.31170 1.22811 0.97496 0.85491 1.01205 1.23568 0.97309 0.95400 1.00936 0.91693 0.87765 0.91670 0.87778 0.88804 0.90052 0.89603 0.75752 0.84727 0.90697 0.90868 0.90324 0.74798 0.89898 0.79451 1.17147 1.17226 0.84225 0.93300 0.93729 0.89126 0.89330 0.86786 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.37 10.57 -39.24 -0.41 -0.78 16 3 C 0.47 0.67 7.49 36.01 0.27 0.94 16 4 O -0.50 -2.17 15.65 -18.75 -0.29 -2.46 16 5 C -0.11 0.16 3.91 -90.95 -0.36 -0.20 16 6 H 0.13 -0.41 7.61 -51.93 -0.40 -0.80 16 7 C -0.10 0.21 7.05 -25.92 -0.18 0.03 16 8 C 0.08 -0.12 0.84 -89.81 -0.08 -0.19 16 9 C 0.12 -0.09 4.67 -4.04 -0.02 -0.11 16 10 N -0.72 0.13 5.39 -61.33 -0.33 -0.21 16 11 C 0.56 1.69 7.76 -12.44 -0.10 1.59 16 12 O -0.53 -3.57 16.34 5.28 0.09 -3.48 16 13 C -0.13 -0.29 5.87 -104.96 -0.62 -0.91 16 14 C -0.07 0.02 9.18 -39.22 -0.36 -0.34 16 15 C -0.11 0.03 5.89 -104.53 -0.62 -0.58 16 16 C -0.12 0.27 9.78 36.01 0.35 0.62 16 17 C 0.14 0.05 6.62 -39.02 -0.26 -0.21 16 18 O -0.49 0.74 11.52 -18.82 -0.22 0.52 16 19 C -0.14 -0.25 5.27 -104.53 -0.55 -0.80 16 20 C -0.08 -0.06 2.33 36.00 0.08 0.02 16 21 O -0.53 -0.24 12.65 -35.23 -0.45 -0.68 16 22 Si 0.74 0.77 30.40 -169.99 -5.17 -4.40 16 23 C -0.05 -0.17 8.20 -39.22 -0.32 -0.49 16 24 O -0.36 0.11 10.33 -35.23 -0.36 -0.25 16 25 C 0.03 -0.03 10.61 101.05 1.07 1.04 16 26 C -0.13 0.18 5.77 -25.92 -0.15 0.03 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 28 H 0.10 -0.33 8.14 -51.92 -0.42 -0.75 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 30 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 31 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 32 H 0.08 0.00 7.43 -51.93 -0.39 -0.38 16 33 H 0.09 -0.10 7.31 -51.93 -0.38 -0.48 16 34 H 0.41 -0.81 6.34 -40.82 -0.26 -1.07 16 35 H 0.14 -0.39 6.39 -52.48 -0.34 -0.73 16 36 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 37 H 0.07 -0.22 8.09 -51.93 -0.42 -0.64 16 38 H 0.08 -0.14 7.52 -51.93 -0.39 -0.53 16 39 H 0.39 -2.41 8.56 45.56 0.39 -2.02 16 40 H 0.08 -0.01 7.82 -51.93 -0.41 -0.42 16 41 H 0.36 -1.16 8.19 45.56 0.37 -0.79 16 42 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 43 H -0.25 -1.00 6.81 56.52 0.38 -0.61 16 44 H 0.14 0.65 4.51 -52.49 -0.24 0.41 16 45 H 0.05 -0.09 7.35 -51.93 -0.38 -0.47 16 46 H 0.04 -0.05 7.27 -51.93 -0.38 -0.43 16 47 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 48 H 0.09 -0.20 8.10 -51.93 -0.42 -0.62 16 49 H 0.11 0.02 7.44 -51.93 -0.39 -0.36 16 LS Contribution 405.39 15.07 6.11 6.11 Total: 0.00 -10.74 405.39 -7.98 -18.71 By element: Atomic # 1 Polarization: -8.35 SS G_CDS: -6.18 Total: -14.53 kcal Atomic # 6 Polarization: 2.22 SS G_CDS: -0.76 Total: 1.46 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.33 Total: -0.21 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -1.65 Total: -7.15 kcal Atomic # 14 Polarization: 0.77 SS G_CDS: -5.17 Total: -4.40 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -10.74 -7.98 -18.71 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -161.469 kcal (2) G-P(sol) polarization free energy of solvation -10.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.975 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds