Wall clock time and date at job start Tue Mar 9 2021 12:56:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34235 * 116.99476 * 2 1 4 4 O 1.20816 * 120.00108 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99208 * 179.97438 * 3 2 1 6 6 H 1.09001 * 112.85033 * 48.80901 * 5 3 2 7 7 C 1.53786 * 113.60710 * 180.02562 * 5 3 2 8 8 C 1.53781 * 87.07885 * 139.98465 * 7 5 3 9 9 C 1.53004 * 113.61495 * 89.11427 * 8 7 5 10 10 N 1.46497 * 109.46931 * 59.98075 * 9 8 7 11 11 C 1.34779 * 119.99721 * 185.09024 * 10 9 8 12 12 O 1.21612 * 119.99926 * 359.97438 * 11 10 9 13 13 C 1.47380 * 119.99809 * 179.97438 * 11 10 9 14 14 C 1.36418 * 127.18665 * 179.97438 * 13 11 10 15 15 C 1.50703 * 125.80755 * 359.96402 * 14 13 11 16 16 O 1.33657 * 108.39444 * 179.97438 * 14 13 11 17 17 C 1.34213 * 110.90688 * 0.02562 * 16 14 13 18 18 C 1.50710 * 125.43889 * 180.02562 * 17 16 14 19 19 O 1.42906 * 109.46737 * 244.97308 * 18 17 16 20 20 Si 1.86298 * 109.46786 * 4.97120 * 18 17 16 21 21 C 1.34181 * 109.12550 * 359.74588 * 17 16 14 22 22 O 1.42902 * 113.61543 * 220.01872 * 8 7 5 23 23 C 1.42903 * 114.00409 * 174.60314 * 22 8 7 24 24 C 1.53775 * 113.61629 * 277.49257 * 5 3 2 25 25 H 1.08994 * 109.47458 * 60.00220 * 1 2 3 26 26 H 1.09000 * 109.46875 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.47419 * 299.99719 * 1 2 3 28 28 H 1.09003 * 113.61208 * 254.52566 * 7 5 3 29 29 H 1.08994 * 113.61531 * 25.35115 * 7 5 3 30 30 H 1.09005 * 109.46767 * 179.97438 * 9 8 7 31 31 H 1.08994 * 109.47325 * 299.97330 * 9 8 7 32 32 H 0.97002 * 120.00176 * 5.07990 * 10 9 8 33 33 H 1.08995 * 109.46679 * 89.99907 * 15 14 13 34 34 H 1.08997 * 109.47102 * 210.00323 * 15 14 13 35 35 H 1.09001 * 109.46635 * 330.00232 * 15 14 13 36 36 H 1.08992 * 109.46839 * 124.97250 * 18 17 16 37 37 H 0.96702 * 113.99880 * 60.00312 * 19 18 17 38 38 H 1.48501 * 109.99779 * 58.68376 * 20 18 17 39 39 H 1.48503 * 109.99618 * 179.97438 * 20 18 17 40 40 H 1.08006 * 127.02537 * 180.26654 * 21 17 16 41 41 H 1.08996 * 109.47063 * 305.98384 * 23 22 8 42 42 H 1.09005 * 109.46560 * 65.97803 * 23 22 8 43 43 H 1.08990 * 109.47144 * 185.97770 * 23 22 8 44 44 H 1.08997 * 113.61935 * 334.57865 * 24 5 3 45 45 H 1.09005 * 113.60972 * 105.47699 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0239 0.6363 -0.7550 7 6 4.1076 2.7143 0.0011 8 6 5.1806 2.2267 0.9889 9 6 6.4439 1.6954 0.3086 10 7 7.0454 2.7572 -0.5018 11 6 8.1150 2.4894 -1.2769 12 8 8.5809 1.3664 -1.3032 13 6 8.7198 3.5575 -2.0926 14 6 9.7969 3.4511 -2.9231 15 6 10.5960 2.1984 -3.1746 16 8 10.0232 4.6469 -3.4757 17 6 9.1320 5.5516 -3.0413 18 6 9.0854 7.0003 -3.4541 19 8 9.3616 7.8273 -2.3218 20 14 10.3612 7.3106 -4.7758 21 6 8.2854 4.9589 -2.1855 22 8 5.4622 3.1591 2.0346 23 6 6.3672 2.6665 3.0247 24 6 4.1905 1.1239 1.3978 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 4.5111 3.0294 -0.9612 29 1 3.4164 3.4406 0.4286 30 1 7.1556 1.3700 1.0674 31 1 6.1846 0.8523 -0.3316 32 1 6.6739 3.6530 -0.4807 33 1 10.1638 1.6544 -4.0144 34 1 11.6270 2.4655 -3.4064 35 1 10.5749 1.5693 -2.2846 36 1 8.0948 7.2355 -3.8430 37 1 10.2289 7.6718 -1.9234 38 1 10.1038 6.4335 -5.9461 39 1 10.3250 8.7357 -5.1919 40 1 7.4552 5.4180 -1.6691 41 1 5.9962 1.7197 3.4170 42 1 7.3488 2.5141 2.5758 43 1 6.4470 3.3898 3.8360 44 1 3.5226 1.4153 2.2083 45 1 4.6609 0.1546 1.5634 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:27 Heat of formation + Delta-G solvation = -144.677274 kcal Electronic energy + Delta-G solvation = -30169.357229 eV Core-core repulsion = 25736.162353 eV Total energy + Delta-G solvation = -4433.194876 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.149 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.74549 -42.24925 -40.90651 -39.92848 -38.08163 -37.68100 -36.87658 -35.46258 -34.10049 -33.12207 -30.15300 -29.43585 -28.52498 -28.17837 -26.98895 -25.95201 -25.36441 -23.94600 -22.19113 -21.98780 -20.89892 -20.01101 -19.23188 -18.90868 -18.11656 -17.97115 -17.66014 -17.50336 -17.18307 -16.81751 -16.71156 -16.28784 -16.17714 -16.03279 -15.88358 -15.56205 -15.36260 -14.61704 -14.52308 -14.29679 -14.25144 -14.15407 -13.96892 -13.89570 -13.74740 -13.56938 -13.31611 -13.15782 -12.92326 -12.83036 -12.76254 -12.65638 -12.16278 -12.15720 -11.80587 -11.62815 -11.43327 -11.10518 -10.88753 -10.72103 -10.62854 -10.18153 -9.57048 -5.08302 0.29076 0.83896 1.09683 1.12041 1.40210 1.61815 1.72426 1.88744 2.01037 2.33076 2.63708 3.06544 3.11044 3.15170 3.24482 3.34850 3.38384 3.73234 3.76235 3.85066 3.96428 4.11971 4.14607 4.16636 4.21857 4.22749 4.28563 4.32746 4.39882 4.45507 4.46704 4.48633 4.53386 4.58458 4.64320 4.70883 4.72908 4.76790 4.80322 4.96623 5.08802 5.20548 5.30752 5.35443 5.90765 6.00879 6.33785 6.43662 6.70214 7.17794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.109 4.109 6 H 0.131 0.869 7 C -0.100 4.100 8 C 0.076 3.924 9 C 0.113 3.887 10 N -0.719 5.719 11 C 0.594 3.406 12 O -0.539 6.539 13 C -0.254 4.254 14 C 0.096 3.904 15 C -0.087 4.087 16 O -0.168 6.168 17 C -0.056 4.056 18 C -0.028 4.028 19 O -0.530 6.530 20 Si 0.704 3.296 21 C -0.147 4.147 22 O -0.362 6.362 23 C 0.024 3.976 24 C -0.134 4.134 25 H 0.064 0.936 26 H 0.104 0.896 27 H 0.064 0.936 28 H 0.088 0.912 29 H 0.113 0.887 30 H 0.080 0.920 31 H 0.088 0.912 32 H 0.406 0.594 33 H 0.092 0.908 34 H 0.082 0.918 35 H 0.111 0.889 36 H 0.133 0.867 37 H 0.384 0.616 38 H -0.253 1.253 39 H -0.247 1.247 40 H 0.158 0.842 41 H 0.047 0.953 42 H 0.046 0.954 43 H 0.090 0.910 44 H 0.104 0.896 45 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.294 -1.445 1.063 2.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.128 4.128 6 H 0.149 0.851 7 C -0.137 4.137 8 C 0.035 3.965 9 C -0.011 4.011 10 N -0.371 5.371 11 C 0.383 3.617 12 O -0.418 6.418 13 C -0.258 4.258 14 C 0.043 3.957 15 C -0.143 4.143 16 O -0.065 6.065 17 C -0.104 4.104 18 C -0.138 4.138 19 O -0.336 6.336 20 Si 0.603 3.397 21 C -0.167 4.167 22 O -0.281 6.281 23 C -0.072 4.072 24 C -0.172 4.172 25 H 0.083 0.917 26 H 0.122 0.878 27 H 0.083 0.917 28 H 0.107 0.893 29 H 0.132 0.868 30 H 0.098 0.902 31 H 0.106 0.894 32 H 0.241 0.759 33 H 0.110 0.890 34 H 0.101 0.899 35 H 0.129 0.871 36 H 0.151 0.849 37 H 0.232 0.768 38 H -0.178 1.178 39 H -0.171 1.171 40 H 0.176 0.824 41 H 0.065 0.935 42 H 0.065 0.935 43 H 0.109 0.891 44 H 0.122 0.878 45 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 2.073 -1.208 -0.103 2.401 hybrid contribution -1.169 -0.011 0.432 1.246 sum 0.904 -1.219 0.329 1.553 Atomic orbital electron populations 1.23334 0.75821 1.04061 1.02766 1.86514 1.23803 1.33169 1.83812 1.23344 0.91390 0.81507 0.72257 1.90695 1.66872 1.36406 1.44793 1.22301 0.88148 1.00970 1.01427 0.85104 1.23069 0.96129 0.95210 0.99342 1.23052 0.92650 0.91232 0.89523 1.21623 0.93568 0.90852 0.95022 1.45614 1.31865 1.13941 1.45710 1.17149 0.79363 0.86765 0.78425 1.90783 1.62180 1.22412 1.66451 1.21062 1.02399 0.94905 1.07451 1.22917 0.95131 0.85748 0.91908 1.20703 0.98605 0.89416 1.05538 1.83674 1.48294 1.17457 1.57032 1.22619 0.93023 0.92872 1.01897 1.24432 1.09690 0.82014 0.97682 1.86569 1.41300 1.59611 1.46092 0.94197 0.86865 0.80883 0.77726 1.22602 1.01399 0.91819 1.00874 1.88023 1.65296 1.39651 1.35089 1.22830 0.92684 1.00326 0.91398 1.23491 0.97883 1.00349 0.95457 0.91696 0.87786 0.91707 0.89330 0.86829 0.90193 0.89401 0.75861 0.89004 0.89872 0.87083 0.84950 0.76798 1.17762 1.17072 0.82412 0.93477 0.93512 0.89128 0.87804 0.89014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.49 10.57 -39.27 -0.41 -0.90 16 3 C 0.47 0.86 7.48 36.01 0.27 1.13 16 4 O -0.50 -2.37 15.65 -18.74 -0.29 -2.66 16 5 C -0.11 0.11 3.91 -90.96 -0.36 -0.25 16 6 H 0.13 -0.33 7.66 -51.93 -0.40 -0.73 16 7 C -0.10 0.07 6.57 -25.92 -0.17 -0.10 16 8 C 0.08 -0.09 0.88 -89.83 -0.08 -0.17 16 9 C 0.11 -0.10 4.81 -4.04 -0.02 -0.12 16 10 N -0.72 0.07 5.11 -61.40 -0.31 -0.24 16 11 C 0.59 1.33 7.81 -12.54 -0.10 1.23 16 12 O -0.54 -2.53 14.84 5.27 0.08 -2.45 16 13 C -0.25 -0.42 6.31 -103.28 -0.65 -1.07 16 14 C 0.10 0.12 7.37 -34.96 -0.26 -0.14 16 15 C -0.09 0.05 9.89 36.01 0.36 0.41 16 16 O -0.17 -0.15 8.90 7.65 0.07 -0.08 16 17 C -0.06 -0.02 6.18 -35.73 -0.22 -0.24 16 18 C -0.03 0.03 2.97 36.01 0.11 0.14 16 19 O -0.53 0.48 12.88 -35.23 -0.45 0.03 16 20 Si 0.70 -0.92 32.09 -169.99 -5.46 -6.38 16 21 C -0.15 -0.06 10.48 -37.46 -0.39 -0.46 16 22 O -0.36 -0.10 10.65 -35.23 -0.38 -0.48 16 23 C 0.02 -0.03 10.32 101.05 1.04 1.01 16 24 C -0.13 0.23 6.60 -25.94 -0.17 0.06 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 28 H 0.09 -0.13 7.54 -51.93 -0.39 -0.52 16 29 H 0.11 0.11 7.43 -51.93 -0.39 -0.28 16 30 H 0.08 -0.05 6.38 -51.93 -0.33 -0.38 16 31 H 0.09 -0.09 7.34 -51.93 -0.38 -0.47 16 32 H 0.41 -0.48 7.27 -40.82 -0.30 -0.78 16 33 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 35 H 0.11 0.06 6.49 -51.93 -0.34 -0.28 16 36 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 37 H 0.38 -1.75 8.70 45.56 0.40 -1.36 16 38 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 39 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 40 H 0.16 -0.18 7.74 -52.48 -0.41 -0.59 16 41 H 0.05 -0.11 7.82 -51.93 -0.41 -0.52 16 42 H 0.05 -0.07 6.73 -51.93 -0.35 -0.42 16 43 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 44 H 0.10 -0.11 8.09 -51.93 -0.42 -0.53 16 45 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 LS Contribution 381.14 15.07 5.74 5.74 Total: 0.00 -9.14 381.14 -7.27 -16.41 By element: Atomic # 1 Polarization: -5.20 SS G_CDS: -6.27 Total: -11.47 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: 0.42 Total: 2.48 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.31 Total: -0.24 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -1.39 Total: -6.54 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.46 Total: -6.38 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -9.14 -7.27 -16.41 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.270 kcal (2) G-P(sol) polarization free energy of solvation -9.142 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.411 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.266 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.408 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.677 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds