Wall clock time and date at job start Tue Mar 9 2021 12:56:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34233 * 117.00047 * 2 1 4 4 O 1.20822 * 120.00062 * 359.97438 * 3 2 1 5 5 C 1.50695 * 119.99714 * 179.97438 * 3 2 1 6 6 H 1.08997 * 112.85413 * 311.19323 * 5 3 2 7 7 C 1.53783 * 113.61690 * 82.50317 * 5 3 2 8 8 C 1.53780 * 87.08292 * 139.97562 * 7 5 3 9 9 C 1.53004 * 113.61329 * 89.11778 * 8 7 5 10 10 N 1.46500 * 109.47112 * 77.68532 * 9 8 7 11 11 C 1.34775 * 119.99910 * 175.05833 * 10 9 8 12 12 O 1.21599 * 120.00231 * 0.02562 * 11 10 9 13 13 C 1.47525 * 119.99871 * 179.97438 * 11 10 9 14 14 C 1.39777 * 120.06637 * 179.97438 * 13 11 10 15 15 C 1.37628 * 119.92977 * 179.74868 * 14 13 11 16 16 C 1.50693 * 119.97022 * 180.29112 * 15 14 13 17 17 O 1.42894 * 109.47408 * 105.25317 * 16 15 14 18 18 Si 1.86302 * 109.46873 * 345.24947 * 16 15 14 19 19 C 1.39209 * 120.06569 * 0.54439 * 15 14 13 20 20 N 1.39046 * 119.92942 * 179.72590 * 19 15 14 21 21 C 1.46898 * 110.99634 * 239.72735 * 20 19 15 22 22 C 1.46896 * 111.00084 * 115.77216 * 20 19 15 23 23 C 1.39232 * 120.13499 * 359.45180 * 19 15 14 24 24 C 1.37590 * 120.07446 * 0.27150 * 23 19 15 25 25 O 1.42901 * 113.69418 * 220.00724 * 8 7 5 26 26 C 1.42900 * 113.99876 * 164.93342 * 25 8 7 27 27 C 1.53777 * 87.08203 * 334.57029 * 8 7 5 28 28 H 1.09003 * 109.47100 * 300.00033 * 1 2 3 29 29 H 1.09000 * 109.46864 * 59.99857 * 1 2 3 30 30 H 1.08998 * 109.47015 * 179.97438 * 1 2 3 31 31 H 1.09006 * 113.61138 * 25.43148 * 7 5 3 32 32 H 1.08991 * 113.61197 * 254.52800 * 7 5 3 33 33 H 1.09004 * 109.46808 * 317.68241 * 9 8 7 34 34 H 1.09001 * 109.47435 * 197.68618 * 9 8 7 35 35 H 0.96993 * 120.00003 * 355.05385 * 10 9 8 36 36 H 1.08003 * 120.03812 * 0.02562 * 14 13 11 37 37 H 1.09006 * 109.47364 * 225.25669 * 16 15 14 38 38 H 0.96705 * 114.00277 * 300.00203 * 17 16 15 39 39 H 1.48508 * 109.99924 * 179.97438 * 18 16 15 40 40 H 1.48496 * 110.00497 * 301.32265 * 18 16 15 41 41 H 1.08994 * 109.47544 * 60.00320 * 21 20 19 42 42 H 1.09003 * 109.46903 * 299.99572 * 21 20 19 43 43 H 1.08997 * 109.46869 * 180.02562 * 21 20 19 44 44 H 1.09002 * 109.47268 * 183.95269 * 22 20 19 45 45 H 1.09002 * 109.47015 * 303.95711 * 22 20 19 46 46 H 1.08999 * 109.47273 * 63.94901 * 22 20 19 47 47 H 1.08005 * 119.96365 * 180.29789 * 23 19 15 48 48 H 1.08002 * 120.03997 * 180.02562 * 24 23 19 49 49 H 1.09006 * 109.46399 * 184.22018 * 26 25 8 50 50 H 1.08998 * 109.47530 * 304.21324 * 26 25 8 51 51 H 1.08996 * 109.47153 * 64.22165 * 26 25 8 52 52 H 1.09002 * 113.61550 * 139.98079 * 27 8 7 53 53 H 1.09007 * 113.61289 * 270.88152 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0234 0.6365 0.7567 7 6 4.1917 1.1231 -1.3961 8 6 5.1815 2.2266 -0.9866 9 6 6.4442 1.6952 -0.3054 10 7 7.3533 1.1519 -1.3176 11 6 8.5775 0.7164 -0.9596 12 8 8.9273 0.7740 0.2035 13 6 9.4928 0.1687 -1.9788 14 6 10.7629 -0.2828 -1.6092 15 6 11.6125 -0.7980 -2.5615 16 6 12.9796 -1.2912 -2.1630 17 8 12.9907 -2.7201 -2.1678 18 14 13.3890 -0.6726 -0.4541 19 6 11.2123 -0.8591 -3.8935 20 7 12.0752 -1.3749 -4.8541 21 6 12.3690 -0.3747 -5.8890 22 6 11.5285 -2.6021 -5.4482 23 6 9.9477 -0.4102 -4.2647 24 6 9.0916 0.1007 -3.3164 25 8 5.4653 3.1599 -2.0308 26 6 6.0981 4.3598 -1.5817 27 6 4.1078 2.7141 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 3.5244 1.4144 -2.2073 32 1 4.6621 0.1539 -1.5609 33 1 6.1734 0.9090 0.3994 34 1 6.9383 2.5071 0.2284 35 1 7.0742 1.1055 -2.2453 36 1 11.0756 -0.2317 -0.5767 37 1 13.7206 -0.9197 -2.8710 38 1 12.3544 -3.1204 -1.5595 39 1 14.7347 -1.1527 -0.0490 40 1 13.3496 0.8116 -0.4280 41 1 12.8372 0.4961 -5.4303 42 1 11.4420 -0.0739 -6.3773 43 1 13.0455 -0.8043 -6.6279 44 1 12.2536 -3.0228 -6.1449 45 1 11.3199 -3.3256 -4.6600 46 1 10.6064 -2.3687 -5.9804 47 1 9.6383 -0.4633 -5.2981 48 1 8.1107 0.4484 -3.6049 49 1 6.2118 5.0464 -2.4207 50 1 5.4856 4.8270 -0.8106 51 1 7.0794 4.1215 -1.1716 52 1 4.5105 3.0293 0.9631 53 1 3.4175 3.4403 -0.4289 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15102698_13422196.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:40 Heat of formation + Delta-G solvation = -114.992528 kcal Electronic energy + Delta-G solvation = -35726.831301 eV Core-core repulsion = 30953.340936 eV Total energy + Delta-G solvation = -4773.490365 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.25923 -41.63272 -40.82117 -40.01549 -37.80587 -37.70670 -37.18746 -36.85124 -35.56708 -32.83078 -31.46888 -29.85600 -28.53710 -28.49986 -28.13537 -26.88145 -26.78333 -26.08338 -25.18975 -23.19274 -22.75510 -22.09914 -21.17724 -20.23041 -19.33004 -18.91701 -18.14134 -17.88154 -17.62198 -17.52977 -17.29386 -16.76722 -16.57310 -16.40214 -16.23376 -16.18853 -15.98627 -15.85119 -15.52479 -15.46509 -15.09395 -14.75766 -14.71789 -14.50440 -14.30914 -14.20191 -13.99612 -13.94203 -13.54526 -13.42075 -13.23900 -13.07351 -12.97243 -12.92213 -12.75341 -12.65588 -12.60324 -12.51958 -12.22936 -12.05151 -12.02840 -11.85441 -11.56314 -11.42064 -11.16874 -10.65991 -10.37696 -10.26608 -10.08545 -9.75703 -9.49890 -5.01639 -0.36209 0.17704 1.04021 1.29063 1.58097 1.67287 1.69224 1.91476 1.93240 2.65980 2.69586 2.81020 3.15465 3.27573 3.35777 3.40926 3.53018 3.65120 3.70352 3.84210 3.90807 4.05981 4.12800 4.16868 4.26100 4.26426 4.28696 4.33190 4.36884 4.41734 4.46265 4.49108 4.51907 4.58082 4.60276 4.62838 4.65060 4.67478 4.69485 4.79548 4.80745 4.87076 4.90691 4.93767 5.01682 5.04666 5.05737 5.14403 5.26320 5.29677 5.32622 5.57655 5.85845 6.09102 6.30164 6.42847 6.63419 6.84321 7.10466 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.360 6.360 3 C 0.471 3.529 4 O -0.538 6.538 5 C -0.106 4.106 6 H 0.156 0.844 7 C -0.095 4.095 8 C 0.084 3.916 9 C 0.115 3.885 10 N -0.706 5.706 11 C 0.561 3.439 12 O -0.570 6.570 13 C -0.146 4.146 14 C -0.056 4.056 15 C -0.117 4.117 16 C -0.038 4.038 17 O -0.542 6.542 18 Si 0.739 3.261 19 C 0.137 3.863 20 N -0.524 5.524 21 C 0.024 3.976 22 C 0.035 3.965 23 C -0.157 4.157 24 C -0.056 4.056 25 O -0.375 6.375 26 C 0.024 3.976 27 C -0.136 4.136 28 H 0.060 0.940 29 H 0.060 0.940 30 H 0.129 0.871 31 H 0.095 0.905 32 H 0.113 0.887 33 H 0.096 0.904 34 H 0.074 0.926 35 H 0.415 0.585 36 H 0.142 0.858 37 H 0.106 0.894 38 H 0.389 0.611 39 H -0.291 1.291 40 H -0.295 1.295 41 H 0.063 0.937 42 H 0.043 0.957 43 H 0.082 0.918 44 H 0.078 0.922 45 H 0.068 0.932 46 H 0.041 0.959 47 H 0.146 0.854 48 H 0.156 0.844 49 H 0.095 0.905 50 H 0.050 0.950 51 H 0.044 0.956 52 H 0.098 0.902 53 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.849 -2.548 -3.135 5.580 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.276 6.276 3 C 0.316 3.684 4 O -0.428 6.428 5 C -0.125 4.125 6 H 0.173 0.827 7 C -0.132 4.132 8 C 0.044 3.956 9 C -0.009 4.009 10 N -0.359 5.359 11 C 0.350 3.650 12 O -0.451 6.451 13 C -0.150 4.150 14 C -0.075 4.075 15 C -0.118 4.118 16 C -0.150 4.150 17 O -0.348 6.348 18 Si 0.646 3.354 19 C 0.042 3.958 20 N -0.245 5.245 21 C -0.122 4.122 22 C -0.111 4.111 23 C -0.177 4.177 24 C -0.075 4.075 25 O -0.294 6.294 26 C -0.072 4.072 27 C -0.174 4.174 28 H 0.079 0.921 29 H 0.079 0.921 30 H 0.147 0.853 31 H 0.113 0.887 32 H 0.131 0.869 33 H 0.114 0.886 34 H 0.092 0.908 35 H 0.253 0.747 36 H 0.159 0.841 37 H 0.124 0.876 38 H 0.238 0.762 39 H -0.218 1.218 40 H -0.222 1.222 41 H 0.082 0.918 42 H 0.062 0.938 43 H 0.101 0.899 44 H 0.097 0.903 45 H 0.087 0.913 46 H 0.059 0.941 47 H 0.164 0.836 48 H 0.173 0.827 49 H 0.113 0.887 50 H 0.069 0.931 51 H 0.062 0.938 52 H 0.116 0.884 53 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.454 -1.809 -2.254 3.791 hybrid contribution -0.950 0.834 -1.000 1.612 sum -3.404 -0.975 -3.253 4.808 Atomic orbital electron populations 1.23531 0.75046 1.05647 1.02406 1.86517 1.24717 1.32952 1.83444 1.23926 0.92453 0.81046 0.70995 1.90679 1.67898 1.37547 1.46671 1.22483 0.86228 1.01191 1.02613 0.82680 1.23020 0.96185 0.99420 0.94594 1.22997 0.92099 0.91240 0.89304 1.21658 0.88551 0.99677 0.90976 1.45585 1.14325 1.63051 1.12891 1.18279 0.81765 0.77285 0.87711 1.90804 1.76438 1.57307 1.20534 1.19823 0.95380 1.05644 0.94106 1.21071 0.92328 0.94854 0.99214 1.20248 0.97371 1.01457 0.92732 1.24702 0.95267 0.85538 1.09450 1.86519 1.63942 1.16571 1.67813 0.94235 0.82696 0.78571 0.79904 1.18980 0.90613 0.94248 0.91944 1.59371 1.44140 1.06613 1.14373 1.22526 1.01232 0.94761 0.93696 1.22416 0.98805 0.90438 0.99461 1.21828 0.94024 1.00734 1.01150 1.21414 1.00197 0.95274 0.90650 1.87940 1.80151 1.28843 1.32487 1.22853 0.96477 0.86302 1.01552 1.23540 0.97156 0.95249 1.01457 0.92110 0.92082 0.85268 0.88663 0.86858 0.88602 0.90811 0.74716 0.84057 0.87648 0.76190 1.21804 1.22232 0.91807 0.93804 0.89892 0.90343 0.91311 0.94082 0.83642 0.82680 0.88677 0.93147 0.93767 0.88385 0.88722 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.41 10.57 -51.45 -0.54 -0.95 16 3 C 0.47 1.11 7.48 71.23 0.53 1.64 16 4 O -0.54 -4.97 15.65 21.98 0.34 -4.62 16 5 C -0.11 0.48 3.91 -11.01 -0.04 0.43 16 6 H 0.16 -1.41 7.62 -2.39 -0.02 -1.43 16 7 C -0.09 0.59 7.04 31.12 0.22 0.81 16 8 C 0.08 -0.42 0.84 -10.27 -0.01 -0.43 16 9 C 0.12 -0.50 4.56 86.38 0.39 -0.11 16 10 N -0.71 2.67 5.39 -466.26 -2.51 0.15 16 11 C 0.56 1.16 7.76 86.69 0.67 1.83 16 12 O -0.57 -5.33 16.33 -4.03 -0.07 -5.40 16 13 C -0.15 -0.02 5.88 -20.08 -0.12 -0.13 16 14 C -0.06 -0.09 8.19 22.50 0.18 0.09 16 15 C -0.12 -0.18 5.27 -19.78 -0.10 -0.29 16 16 C -0.04 -0.09 2.33 71.23 0.17 0.08 16 17 O -0.54 -1.02 12.88 -148.98 -1.92 -2.94 16 18 Si 0.74 1.84 29.91 68.60 2.05 3.89 16 19 C 0.14 0.06 4.69 38.47 0.18 0.24 16 20 N -0.52 -0.22 4.20 -745.12 -3.13 -3.35 16 21 C 0.02 -0.05 9.34 127.69 1.19 1.14 16 22 C 0.03 -0.07 9.32 127.69 1.19 1.12 16 23 C -0.16 0.51 8.57 22.36 0.19 0.70 16 24 C -0.06 0.25 9.53 22.50 0.21 0.46 16 25 O -0.38 0.75 10.33 -148.98 -1.54 -0.79 16 26 C 0.02 -0.09 10.56 113.37 1.20 1.11 16 27 C -0.14 0.47 5.96 31.12 0.19 0.66 16 28 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 29 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 30 H 0.13 -1.00 8.14 -2.39 -0.02 -1.02 16 31 H 0.09 -0.39 8.09 -2.38 -0.02 -0.40 16 32 H 0.11 -1.12 8.10 -2.39 -0.02 -1.14 16 33 H 0.10 -0.56 7.32 -2.39 -0.02 -0.58 16 34 H 0.07 -0.15 7.35 -2.39 -0.02 -0.17 16 35 H 0.41 -3.15 6.34 -92.71 -0.59 -3.74 16 36 H 0.14 0.22 4.69 -2.91 -0.01 0.20 16 37 H 0.11 0.52 7.78 -2.38 -0.02 0.50 16 38 H 0.39 -2.29 8.70 -74.05 -0.64 -2.94 16 39 H -0.29 -2.58 7.11 99.48 0.71 -1.87 16 40 H -0.30 -2.58 7.11 99.48 0.71 -1.87 16 41 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 42 H 0.04 -0.20 7.10 -2.39 -0.02 -0.21 16 43 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 44 H 0.08 -0.22 8.14 -2.39 -0.02 -0.23 16 45 H 0.07 -0.05 8.12 -2.39 -0.02 -0.07 16 46 H 0.04 -0.18 7.45 -2.39 -0.02 -0.20 16 47 H 0.15 -0.95 7.01 -2.91 -0.02 -0.97 16 48 H 0.16 -1.58 6.39 -2.91 -0.02 -1.60 16 49 H 0.09 -0.46 8.14 -2.38 -0.02 -0.48 16 50 H 0.05 -0.20 7.49 -2.39 -0.02 -0.22 16 51 H 0.04 -0.14 7.16 -2.39 -0.02 -0.16 16 52 H 0.10 -0.55 8.10 -2.39 -0.02 -0.57 16 53 H 0.09 0.09 7.44 -2.38 -0.02 0.07 16 Total: 0.00 -23.09 430.47 -0.11 -23.21 By element: Atomic # 1 Polarization: -19.45 SS G_CDS: -0.24 Total: -19.69 kcal Atomic # 6 Polarization: 3.05 SS G_CDS: 7.44 Total: 10.50 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -5.64 Total: -3.20 kcal Atomic # 8 Polarization: -10.98 SS G_CDS: -3.72 Total: -14.70 kcal Atomic # 14 Polarization: 1.84 SS G_CDS: 2.05 Total: 3.89 kcal Total: -23.09 -0.11 -23.21 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_13422196.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.787 kcal (2) G-P(sol) polarization free energy of solvation -23.093 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.206 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds