Wall clock time and date at job start Tue Mar 9 2021 12:57:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34225 * 117.00153 * 2 1 4 4 O 1.20823 * 120.00020 * 0.02562 * 3 2 1 5 5 C 1.50695 * 119.99882 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.85049 * 311.19607 * 5 3 2 7 7 C 1.53782 * 113.61414 * 82.50518 * 5 3 2 8 8 C 1.53777 * 87.08299 * 139.98173 * 7 5 3 9 9 C 1.53000 * 113.69593 * 89.12401 * 8 7 5 10 10 N 1.46497 * 109.46897 * 70.42977 * 9 8 7 11 11 C 1.34779 * 120.00285 * 175.40328 * 10 9 8 12 12 O 1.21281 * 119.99720 * 359.97438 * 11 10 9 13 13 C 1.50697 * 120.00347 * 180.02562 * 11 10 9 14 14 O 1.42907 * 109.47028 * 179.97438 * 13 11 10 15 15 C 1.35899 * 116.99792 * 179.97438 * 14 13 11 16 16 C 1.38731 * 120.05695 * 359.72110 * 15 14 13 17 17 C 1.38146 * 119.94526 * 179.74399 * 16 15 14 18 18 C 1.38267 * 120.05460 * 0.51137 * 17 16 15 19 19 C 1.50696 * 119.94465 * 179.74510 * 18 17 16 20 20 O 1.42904 * 109.47252 * 120.02435 * 19 18 17 21 21 Si 1.86299 * 109.47224 * 0.02562 * 19 18 17 22 22 C 1.38270 * 120.10716 * 359.77006 * 18 17 16 23 23 C 1.38136 * 120.06031 * 359.97126 * 22 18 17 24 24 O 1.42906 * 113.61538 * 220.01995 * 8 7 5 25 25 C 1.42897 * 114.00260 * 157.74968 * 24 8 7 26 26 C 1.53781 * 87.08128 * 334.56700 * 8 7 5 27 27 H 1.09002 * 109.47558 * 180.02562 * 1 2 3 28 28 H 1.09010 * 109.46858 * 299.99883 * 1 2 3 29 29 H 1.09001 * 109.47372 * 59.99354 * 1 2 3 30 30 H 1.08998 * 113.61704 * 25.42722 * 7 5 3 31 31 H 1.09002 * 113.61156 * 254.52846 * 7 5 3 32 32 H 1.09001 * 109.47383 * 190.42979 * 9 8 7 33 33 H 1.08999 * 109.47145 * 310.43133 * 9 8 7 34 34 H 0.97001 * 120.00350 * 355.39660 * 10 9 8 35 35 H 1.08997 * 109.46939 * 299.99315 * 13 11 10 36 36 H 1.08993 * 109.47005 * 59.99482 * 13 11 10 37 37 H 1.08009 * 120.02835 * 0.02562 * 16 15 14 38 38 H 1.08000 * 119.97103 * 180.23828 * 17 16 15 39 39 H 1.09001 * 109.46949 * 240.02382 * 19 18 17 40 40 H 0.96697 * 113.99789 * 300.00121 * 20 19 18 41 41 H 1.48496 * 110.00053 * 180.02562 * 21 19 18 42 42 H 1.48500 * 110.00178 * 301.32199 * 21 19 18 43 43 H 1.08002 * 119.96651 * 179.97438 * 22 18 17 44 44 H 1.08004 * 120.03271 * 179.97438 * 23 22 18 45 45 H 1.08993 * 109.47181 * 177.11600 * 25 24 8 46 46 H 1.09006 * 109.47045 * 57.11037 * 25 24 8 47 47 H 1.09001 * 109.47234 * 297.11697 * 25 24 8 48 48 H 1.08994 * 113.61792 * 139.98312 * 26 8 7 49 49 H 1.09007 * 113.61394 * 270.80322 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2747 -0.0006 6 1 4.0239 0.6361 0.7549 7 6 4.1906 1.1237 -1.3979 8 6 5.1807 2.2268 -0.9887 9 6 6.4448 1.6971 -0.3087 10 7 7.2747 1.0011 -1.2951 11 6 8.4871 0.5292 -0.9430 12 8 8.8912 0.6812 0.1903 13 6 9.3410 -0.1863 -1.9579 14 8 10.5699 -0.5873 -1.3485 15 6 11.4598 -1.2505 -2.1327 16 6 11.1542 -1.5151 -3.4598 17 6 12.0628 -2.1848 -4.2563 18 6 13.2715 -2.6006 -3.7291 19 6 14.2583 -3.3360 -4.5987 20 8 15.4802 -2.5976 -4.6621 21 14 13.5560 -3.5226 -6.3141 22 6 13.5759 -2.3431 -2.4051 23 6 12.6731 -1.6691 -1.6059 24 8 5.4623 3.1598 -2.0338 25 6 5.9450 4.4227 -1.5712 26 6 4.1079 2.7141 -0.0005 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3633 0.5139 0.8901 29 1 -0.3634 0.5139 -0.8899 30 1 3.5226 1.4152 -2.2084 31 1 4.6608 0.1544 -1.5635 32 1 7.0057 2.5301 0.1151 33 1 6.1670 1.0045 0.4858 34 1 6.9516 0.8797 -2.2016 35 1 8.8116 -1.0666 -2.3222 36 1 9.5510 0.4827 -2.7923 37 1 10.2086 -1.1938 -3.8711 38 1 11.8269 -2.3876 -5.2905 39 1 14.4511 -4.3219 -4.1758 40 1 15.3837 -1.7082 -5.0292 41 1 14.5195 -4.2468 -7.1814 42 1 12.2689 -4.2611 -6.2584 43 1 14.5206 -2.6693 -1.9955 44 1 12.9112 -1.4686 -0.5717 45 1 6.1833 5.0558 -2.4258 46 1 6.8417 4.2709 -0.9701 47 1 5.1784 4.9047 -0.9645 48 1 4.5113 3.0287 0.9619 49 1 3.4181 3.4415 -0.4286 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:15 Heat of formation + Delta-G solvation = -164.185115 kcal Electronic energy + Delta-G solvation = -32366.885597 eV Core-core repulsion = 27649.081038 eV Total energy + Delta-G solvation = -4717.804559 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.33659 -41.53835 -40.90946 -40.18009 -38.95222 -37.69913 -37.13643 -36.91501 -35.55204 -32.47352 -31.77626 -30.75551 -29.51123 -28.40542 -28.00413 -26.81093 -26.22128 -25.58863 -23.97985 -22.41784 -22.15591 -21.66121 -20.29141 -19.54300 -19.31794 -18.54283 -18.20540 -18.04088 -17.56878 -17.53260 -17.16501 -16.93399 -16.76447 -16.49828 -16.28757 -16.12326 -15.96454 -15.82315 -15.55578 -15.38438 -14.82204 -14.67497 -14.57861 -14.32557 -14.26318 -14.08104 -13.76076 -13.72065 -13.54213 -13.42066 -13.32973 -13.08237 -12.88878 -12.77389 -12.25641 -12.23194 -12.13049 -12.06145 -11.84930 -11.74493 -11.64014 -11.51357 -11.04581 -10.77602 -10.43256 -10.32386 -10.06285 -9.22850 -5.06672 0.27356 0.28475 1.05761 1.28566 1.33143 1.42077 1.58730 1.59856 1.95485 2.32145 2.60530 2.64821 2.96495 3.09816 3.18055 3.22438 3.43195 3.47494 3.66446 3.71752 3.80131 3.84058 3.85532 3.86858 3.90521 4.10864 4.12283 4.19069 4.21159 4.25102 4.32054 4.38418 4.41903 4.42514 4.44559 4.49678 4.53816 4.55187 4.63033 4.70061 4.71482 4.87342 4.93499 5.11041 5.14170 5.23330 5.30747 5.49045 5.66174 5.92105 6.16898 6.31748 6.57874 6.64838 7.00345 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.110 4.110 6 H 0.132 0.868 7 C -0.101 4.101 8 C 0.075 3.925 9 C 0.118 3.882 10 N -0.720 5.720 11 C 0.517 3.483 12 O -0.513 6.513 13 C 0.041 3.959 14 O -0.288 6.288 15 C 0.134 3.866 16 C -0.206 4.206 17 C -0.076 4.076 18 C -0.157 4.157 19 C -0.063 4.063 20 O -0.541 6.541 21 Si 0.687 3.313 22 C -0.051 4.051 23 C -0.145 4.145 24 O -0.364 6.364 25 C 0.026 3.974 26 C -0.135 4.135 27 H 0.104 0.896 28 H 0.064 0.936 29 H 0.064 0.936 30 H 0.104 0.896 31 H 0.093 0.907 32 H 0.082 0.918 33 H 0.085 0.915 34 H 0.407 0.593 35 H 0.096 0.904 36 H 0.097 0.903 37 H 0.132 0.868 38 H 0.130 0.870 39 H 0.113 0.887 40 H 0.379 0.621 41 H -0.255 1.255 42 H -0.259 1.259 43 H 0.135 0.865 44 H 0.136 0.864 45 H 0.090 0.910 46 H 0.045 0.955 47 H 0.048 0.952 48 H 0.089 0.911 49 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.016 0.884 -3.836 4.959 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.129 4.129 6 H 0.150 0.850 7 C -0.139 4.139 8 C 0.035 3.965 9 C -0.006 4.006 10 N -0.375 5.375 11 C 0.301 3.699 12 O -0.387 6.387 13 C -0.038 4.038 14 O -0.201 6.201 15 C 0.088 3.912 16 C -0.225 4.225 17 C -0.094 4.094 18 C -0.158 4.158 19 C -0.174 4.174 20 O -0.346 6.346 21 Si 0.589 3.411 22 C -0.069 4.069 23 C -0.164 4.164 24 O -0.283 6.283 25 C -0.070 4.070 26 C -0.173 4.173 27 H 0.122 0.878 28 H 0.083 0.917 29 H 0.083 0.917 30 H 0.122 0.878 31 H 0.112 0.888 32 H 0.100 0.900 33 H 0.103 0.897 34 H 0.242 0.758 35 H 0.114 0.886 36 H 0.115 0.885 37 H 0.150 0.850 38 H 0.147 0.853 39 H 0.130 0.870 40 H 0.226 0.774 41 H -0.180 1.180 42 H -0.184 1.184 43 H 0.152 0.848 44 H 0.154 0.846 45 H 0.109 0.891 46 H 0.064 0.936 47 H 0.066 0.934 48 H 0.107 0.893 49 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -2.980 0.193 -3.353 4.490 hybrid contribution -0.539 -0.111 0.297 0.625 sum -3.518 0.082 -3.056 4.661 Atomic orbital electron populations 1.23346 0.75747 1.04104 1.02792 1.86511 1.23862 1.33143 1.83770 1.23335 0.91385 0.81524 0.72271 1.90697 1.66872 1.36427 1.44801 1.22339 0.88216 1.00913 1.01432 0.84998 1.23024 0.96709 0.98751 0.95396 1.23059 0.92232 0.91510 0.89700 1.21588 0.90172 0.97524 0.91267 1.45582 1.17410 1.59082 1.15419 1.20026 0.81562 0.79367 0.88912 1.90797 1.71434 1.55860 1.20566 1.22447 0.85335 1.00486 0.95532 1.86170 1.25964 1.70478 1.37454 1.19071 0.89907 0.92603 0.89580 1.21178 1.01823 1.06048 0.93415 1.20790 0.93037 0.96496 0.99030 1.20257 0.96307 1.03409 0.95807 1.24978 0.87616 0.96817 1.08035 1.86502 1.29582 1.31554 1.87008 0.94805 0.79118 0.89478 0.77672 1.20855 0.98515 0.95155 0.92385 1.20535 0.92107 1.02299 1.01441 1.87959 1.85689 1.23827 1.30788 1.22818 0.98279 0.84742 1.01195 1.23567 0.97327 0.95423 1.00962 0.87754 0.91674 0.91675 0.87765 0.88804 0.90009 0.89662 0.75752 0.88639 0.88529 0.85014 0.85311 0.86977 0.77379 1.18011 1.18380 0.84757 0.84647 0.89110 0.93632 0.93361 0.89278 0.86790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.21 10.57 -39.25 -0.41 -0.62 16 3 C 0.47 0.43 7.48 36.00 0.27 0.70 16 4 O -0.50 -1.95 15.65 -18.75 -0.29 -2.24 16 5 C -0.11 0.23 3.91 -90.96 -0.36 -0.12 16 6 H 0.13 -0.50 7.60 -51.93 -0.39 -0.89 16 7 C -0.10 0.31 6.99 -25.92 -0.18 0.12 16 8 C 0.08 -0.19 0.78 -89.81 -0.07 -0.26 16 9 C 0.12 -0.24 4.87 -4.04 -0.02 -0.26 16 10 N -0.72 1.70 5.47 -60.30 -0.33 1.37 16 11 C 0.52 0.28 7.91 -10.99 -0.09 0.19 16 12 O -0.51 -2.80 16.50 -14.35 -0.24 -3.04 16 13 C 0.04 -0.06 5.22 36.00 0.19 0.12 16 14 O -0.29 -0.65 9.67 -39.33 -0.38 -1.03 16 15 C 0.13 0.18 6.69 -39.22 -0.26 -0.09 16 16 C -0.21 0.15 9.04 -39.43 -0.36 -0.21 16 17 C -0.08 0.06 8.66 -39.60 -0.34 -0.28 16 18 C -0.16 -0.01 5.39 -104.60 -0.56 -0.57 16 19 C -0.06 0.02 2.82 36.00 0.10 0.12 16 20 O -0.54 -0.09 12.77 -35.23 -0.45 -0.54 16 21 Si 0.69 -0.92 29.78 -169.99 -5.06 -5.98 16 22 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 23 C -0.15 -0.21 9.99 -39.44 -0.39 -0.60 16 24 O -0.36 0.41 10.59 -35.23 -0.37 0.04 16 25 C 0.03 -0.06 10.61 101.05 1.07 1.02 16 26 C -0.13 0.27 5.76 -25.92 -0.15 0.12 16 27 H 0.10 -0.36 8.14 -51.93 -0.42 -0.79 16 28 H 0.06 -0.07 8.14 -51.92 -0.42 -0.49 16 29 H 0.06 -0.07 8.13 -51.93 -0.42 -0.50 16 30 H 0.10 -0.23 8.09 -51.93 -0.42 -0.65 16 31 H 0.09 -0.42 8.10 -51.93 -0.42 -0.84 16 32 H 0.08 -0.08 7.05 -51.93 -0.37 -0.45 16 33 H 0.09 -0.19 7.31 -51.93 -0.38 -0.57 16 34 H 0.41 -1.89 8.46 -40.82 -0.35 -2.24 16 35 H 0.10 -0.39 7.65 -51.93 -0.40 -0.79 16 36 H 0.10 -0.39 7.67 -51.93 -0.40 -0.79 16 37 H 0.13 -0.46 6.30 -52.48 -0.33 -0.79 16 38 H 0.13 -0.37 4.87 -52.49 -0.26 -0.62 16 39 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 40 H 0.38 -1.39 8.70 45.56 0.40 -0.99 16 41 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 42 H -0.26 -0.22 7.11 56.52 0.40 0.19 16 43 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 44 H 0.14 0.14 8.06 -52.48 -0.42 -0.28 16 45 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 46 H 0.05 -0.10 6.92 -51.93 -0.36 -0.46 16 47 H 0.05 -0.12 7.45 -51.93 -0.39 -0.50 16 48 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 49 H 0.11 -0.05 7.39 -51.93 -0.38 -0.43 16 LS Contribution 409.80 15.07 6.18 6.18 Total: 0.00 -11.60 409.80 -8.84 -20.44 By element: Atomic # 1 Polarization: -8.18 SS G_CDS: -7.01 Total: -15.19 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -0.46 Total: 0.62 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -0.33 Total: 1.37 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -2.15 Total: -7.44 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.06 Total: -5.98 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -11.60 -8.84 -20.44 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.742 kcal (2) G-P(sol) polarization free energy of solvation -11.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.840 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.443 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.185 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds