Wall clock time and date at job start Tue Mar 9 2021 12:58:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34229 * 116.99855 * 2 1 4 4 O 1.20825 * 120.00195 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00079 * 180.02562 * 3 2 1 6 6 H 1.08999 * 112.84976 * 48.80431 * 5 3 2 7 7 C 1.53782 * 113.61551 * 180.02562 * 5 3 2 8 8 C 1.53774 * 87.08195 * 140.06315 * 7 5 3 9 9 C 1.53008 * 113.61479 * 89.20101 * 8 7 5 10 10 N 1.46501 * 109.47016 * 70.36831 * 9 8 7 11 11 C 1.34780 * 119.99596 * 175.03419 * 10 9 8 12 12 O 1.21699 * 119.99914 * 4.65389 * 11 10 9 13 13 C 1.46667 * 119.99604 * 184.65076 * 11 10 9 14 14 C 1.37889 * 126.22361 * 173.41784 * 13 11 10 15 15 C 1.39876 * 107.08998 * 179.97438 * 14 13 11 16 16 Br 1.89103 * 126.07169 * 180.02562 * 15 14 13 17 17 C 1.35499 * 107.85797 * 0.02562 * 15 14 13 18 18 C 1.50703 * 125.57433 * 179.97438 * 17 15 14 19 19 O 1.42896 * 109.47128 * 57.57908 * 18 17 15 20 20 Si 1.86295 * 109.46801 * 297.57826 * 18 17 15 21 21 N 1.35601 * 108.85402 * 359.74563 * 17 15 14 22 22 C 1.46504 * 125.67711 * 180.28092 * 21 17 15 23 23 O 1.42906 * 113.61849 * 220.01533 * 8 7 5 24 24 C 1.42893 * 114.00296 * 171.33485 * 23 8 7 25 25 C 1.53780 * 87.17457 * 334.61050 * 8 7 5 26 26 H 1.08998 * 109.46898 * 179.97438 * 1 2 3 27 27 H 1.09006 * 109.46803 * 299.99273 * 1 2 3 28 28 H 1.08996 * 109.47571 * 59.99104 * 1 2 3 29 29 H 1.08999 * 113.61161 * 25.51460 * 7 5 3 30 30 H 1.08997 * 113.61138 * 254.61660 * 7 5 3 31 31 H 1.09001 * 109.46787 * 190.37120 * 9 8 7 32 32 H 1.08999 * 109.46529 * 310.36844 * 9 8 7 33 33 H 0.96997 * 120.00089 * 355.03243 * 10 9 8 34 34 H 1.07994 * 126.45490 * 359.97438 * 14 13 11 35 35 H 1.09000 * 109.46968 * 177.57542 * 18 17 15 36 36 H 0.96703 * 113.99881 * 180.02562 * 19 18 17 37 37 H 1.48508 * 110.00146 * 306.18511 * 20 18 17 38 38 H 1.48500 * 110.00218 * 67.50759 * 20 18 17 39 39 H 1.08998 * 109.47132 * 260.48140 * 22 21 17 40 40 H 1.09003 * 109.47018 * 20.47593 * 22 21 17 41 41 H 1.08999 * 109.47307 * 140.47947 * 22 21 17 42 42 H 1.09002 * 109.46865 * 305.60578 * 24 23 8 43 43 H 1.08995 * 109.47498 * 65.60580 * 24 23 8 44 44 H 1.09005 * 109.47022 * 185.60757 * 24 23 8 45 45 H 1.09000 * 113.61599 * 139.94152 * 25 8 7 46 46 H 1.09003 * 113.60747 * 270.83892 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0233 0.6366 -0.7567 7 6 4.1077 2.7143 0.0001 8 6 5.1827 2.2258 0.9852 9 6 6.4454 1.6970 0.3018 10 7 7.1776 2.8130 -0.3022 11 6 8.3785 2.5993 -0.8755 12 8 8.8164 1.4675 -0.9671 13 6 9.1575 3.7309 -1.3891 14 6 10.4449 3.6778 -1.8803 15 6 10.7944 4.9783 -2.2587 16 35 12.4479 5.5149 -3.0030 17 6 9.7378 5.7852 -1.9974 18 6 9.6840 7.2696 -2.2524 19 8 9.9346 7.5245 -3.6359 20 14 10.9773 8.1243 -1.2192 21 7 8.7348 5.0380 -1.4735 22 6 7.4206 5.5391 -1.0632 23 8 5.4666 3.1574 2.0311 24 6 6.3151 2.6386 3.0571 25 6 4.1956 1.1204 1.3959 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5139 -0.8898 29 1 3.4180 3.4400 0.4311 30 1 4.5090 3.0303 -0.9628 31 1 7.0784 1.2039 1.0396 32 1 6.1670 0.9831 -0.4733 33 1 6.7981 3.7055 -0.2895 34 1 11.0663 2.7980 -1.9580 35 1 8.6973 7.6485 -1.9860 36 1 9.9157 8.4619 -3.8728 37 1 10.8180 7.7470 0.2082 38 1 12.3343 7.7526 -1.6945 39 1 7.4068 5.6803 0.0175 40 1 7.2246 6.4912 -1.5564 41 1 6.6528 4.8188 -1.3454 42 1 5.8877 1.7160 3.4500 43 1 7.3025 2.4342 2.6433 44 1 6.4021 3.3698 3.8608 45 1 4.6679 0.1516 1.5583 46 1 3.5301 1.4097 2.2093 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15102698_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:13 Heat of formation + Delta-G solvation = -92.936143 kcal Electronic energy + Delta-G solvation = -32647.157173 eV Core-core repulsion = 27974.106620 eV Total energy + Delta-G solvation = -4673.050553 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.071 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.03680 -42.24290 -40.97269 -40.03694 -37.76368 -37.67809 -36.91162 -36.07382 -34.43035 -32.39419 -31.25619 -29.94256 -28.73145 -28.13622 -27.64678 -27.07313 -26.50779 -25.45406 -23.01438 -22.20223 -21.73527 -20.81260 -20.10582 -19.29713 -18.85111 -18.45384 -18.20890 -17.56474 -17.40695 -17.29798 -16.98106 -16.66214 -16.38704 -16.17411 -16.00811 -15.69230 -15.47303 -15.43579 -14.89037 -14.58532 -14.54065 -14.36307 -14.13625 -14.03531 -13.94095 -13.71676 -13.58224 -13.30369 -13.25366 -13.09087 -12.87512 -12.76356 -12.60658 -12.39874 -12.11510 -11.87989 -11.83059 -11.67749 -11.58975 -11.47191 -10.85666 -10.72467 -10.60358 -10.46044 -9.91112 -9.36583 -4.99445 -0.01038 0.52807 0.89244 1.00703 1.17431 1.57028 1.62864 1.69528 1.80082 2.00235 2.14006 2.64339 3.08053 3.11258 3.14043 3.22750 3.36597 3.44475 3.52086 3.71267 3.83360 3.85487 4.05966 4.09837 4.19047 4.20297 4.23583 4.26753 4.33488 4.38735 4.41554 4.43934 4.49681 4.53206 4.55450 4.60073 4.67134 4.73461 4.78590 4.84762 4.97369 5.05131 5.16357 5.29457 5.38929 5.67800 6.01440 6.16583 6.59929 6.82257 6.88705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.108 4.108 6 H 0.152 0.848 7 C -0.100 4.100 8 C 0.082 3.918 9 C 0.109 3.891 10 N -0.715 5.715 11 C 0.595 3.405 12 O -0.558 6.558 13 C -0.050 4.050 14 C -0.099 4.099 15 C -0.189 4.189 16 Br -0.014 7.014 17 C 0.093 3.907 18 C -0.050 4.050 19 O -0.549 6.549 20 Si 0.753 3.247 21 N -0.405 5.405 22 C 0.032 3.968 23 O -0.375 6.375 24 C 0.021 3.979 25 C -0.129 4.129 26 H 0.128 0.872 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.101 0.899 30 H 0.100 0.900 31 H 0.080 0.920 32 H 0.096 0.904 33 H 0.411 0.589 34 H 0.152 0.848 35 H 0.112 0.888 36 H 0.409 0.591 37 H -0.304 1.304 38 H -0.253 1.253 39 H 0.109 0.891 40 H 0.132 0.868 41 H 0.104 0.896 42 H 0.057 0.943 43 H 0.040 0.960 44 H 0.096 0.904 45 H 0.109 0.891 46 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.425 4.752 2.363 7.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.316 3.684 4 O -0.424 6.424 5 C -0.127 4.127 6 H 0.170 0.830 7 C -0.137 4.137 8 C 0.042 3.958 9 C -0.014 4.014 10 N -0.372 5.372 11 C 0.383 3.617 12 O -0.437 6.437 13 C -0.163 4.163 14 C -0.127 4.127 15 C -0.275 4.275 16 Br 0.070 6.930 17 C -0.028 4.028 18 C -0.159 4.159 19 O -0.359 6.359 20 Si 0.655 3.345 21 N -0.081 5.081 22 C -0.107 4.107 23 O -0.294 6.294 24 C -0.075 4.075 25 C -0.167 4.167 26 H 0.146 0.854 27 H 0.080 0.920 28 H 0.080 0.920 29 H 0.119 0.881 30 H 0.118 0.882 31 H 0.099 0.901 32 H 0.114 0.886 33 H 0.253 0.747 34 H 0.170 0.830 35 H 0.129 0.871 36 H 0.262 0.738 37 H -0.232 1.232 38 H -0.178 1.178 39 H 0.127 0.873 40 H 0.150 0.850 41 H 0.122 0.878 42 H 0.076 0.924 43 H 0.059 0.941 44 H 0.115 0.885 45 H 0.127 0.873 46 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -4.513 3.969 2.693 6.586 hybrid contribution -0.773 -0.799 0.121 1.119 sum -5.286 3.170 2.814 6.776 Atomic orbital electron populations 1.23537 0.74945 1.05643 1.02499 1.86516 1.24809 1.33028 1.83451 1.23849 0.92335 0.81087 0.71108 1.90679 1.67825 1.37380 1.46547 1.22474 0.86445 1.01277 1.02466 0.83021 1.23066 0.95795 0.95174 0.99690 1.22989 0.92047 0.91461 0.89308 1.21775 0.91999 0.89296 0.98342 1.46154 1.18991 1.13678 1.58388 1.16879 0.80861 0.86543 0.77414 1.90869 1.70939 1.23242 1.58623 1.20319 0.96833 0.84269 1.14849 1.21296 0.94500 0.96690 1.00172 1.21005 0.95610 0.96110 1.14741 1.96621 1.22665 1.90150 1.83518 1.20091 0.87490 0.93920 1.01341 1.24293 1.10529 0.89477 0.91646 1.86509 1.94893 1.33335 1.21142 0.95429 0.77930 0.87104 0.74043 1.44106 1.12780 1.05449 1.45789 1.22946 0.79531 1.04072 1.04199 1.87969 1.69075 1.38728 1.33588 1.22900 0.93178 1.00891 0.90501 1.23510 0.97258 1.00954 0.94944 0.85376 0.91981 0.91984 0.88058 0.88199 0.90147 0.88605 0.74694 0.82989 0.87061 0.73833 1.23177 1.17751 0.87317 0.84961 0.87825 0.92449 0.94130 0.88534 0.87296 0.88299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.44 10.57 -51.41 -0.54 -0.99 16 3 C 0.47 0.91 7.49 71.24 0.53 1.45 16 4 O -0.53 -4.35 15.65 21.97 0.34 -4.01 16 5 C -0.11 0.50 3.91 -10.95 -0.04 0.45 16 6 H 0.15 -1.30 7.60 -2.39 -0.02 -1.32 16 7 C -0.10 0.48 6.76 31.12 0.21 0.69 16 8 C 0.08 -0.42 0.79 -10.27 -0.01 -0.43 16 9 C 0.11 -0.37 4.55 86.38 0.39 0.02 16 10 N -0.71 1.02 5.33 -467.07 -2.49 -1.47 16 11 C 0.60 3.74 7.77 86.44 0.67 4.41 16 12 O -0.56 -7.63 16.90 -4.34 -0.07 -7.70 16 13 C -0.05 -0.32 6.88 40.35 0.28 -0.04 16 14 C -0.10 -0.98 10.64 22.58 0.24 -0.74 16 15 C -0.19 -1.65 6.10 22.03 0.13 -1.51 16 16 Br -0.01 -0.12 30.38 -20.37 -0.62 -0.74 16 17 C 0.09 0.33 5.35 41.34 0.22 0.56 16 18 C -0.05 0.19 2.74 71.24 0.20 0.38 16 19 O -0.55 1.74 12.40 -148.98 -1.85 -0.11 16 20 Si 0.75 -2.29 31.27 68.60 2.15 -0.14 16 21 N -0.40 -0.35 3.16 -519.60 -1.64 -2.00 16 22 C 0.03 -0.28 9.30 127.77 1.19 0.90 16 23 O -0.37 0.98 10.60 -148.98 -1.58 -0.60 16 24 C 0.02 -0.10 10.40 113.37 1.18 1.08 16 25 C -0.13 0.77 6.49 31.18 0.20 0.97 16 26 H 0.13 -0.97 8.14 -2.39 -0.02 -0.99 16 27 H 0.06 -0.11 8.13 -2.38 -0.02 -0.13 16 28 H 0.06 -0.10 8.13 -2.39 -0.02 -0.12 16 29 H 0.10 -0.13 7.44 -2.39 -0.02 -0.15 16 30 H 0.10 -0.76 8.10 -2.39 -0.02 -0.78 16 31 H 0.08 -0.15 6.93 -2.39 -0.02 -0.17 16 32 H 0.10 -0.43 7.30 -2.39 -0.02 -0.44 16 33 H 0.41 -2.27 4.13 -92.71 -0.38 -2.65 16 34 H 0.15 1.58 8.06 -2.91 -0.02 1.56 16 35 H 0.11 -1.26 6.27 -2.39 -0.01 -1.27 16 36 H 0.41 -5.66 8.74 -74.06 -0.65 -6.31 16 37 H -0.30 -1.35 7.11 99.48 0.71 -0.64 16 38 H -0.25 -0.93 5.67 99.48 0.56 -0.36 16 39 H 0.11 -1.26 8.04 -2.39 -0.02 -1.28 16 40 H 0.13 -1.86 6.56 -2.39 -0.02 -1.87 16 41 H 0.10 -1.14 6.18 -2.39 -0.01 -1.15 16 42 H 0.06 -0.36 7.69 -2.39 -0.02 -0.38 16 43 H 0.04 -0.14 6.96 -2.39 -0.02 -0.16 16 44 H 0.10 -0.56 8.14 -2.38 -0.02 -0.58 16 45 H 0.11 -0.98 8.10 -2.39 -0.02 -0.99 16 46 H 0.10 -0.42 8.10 -2.39 -0.02 -0.44 16 Total: 0.00 -29.24 397.51 0.20 -29.04 By element: Atomic # 1 Polarization: -20.53 SS G_CDS: -0.09 Total: -20.62 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: 6.59 Total: 9.33 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -4.13 Total: -3.47 kcal Atomic # 8 Polarization: -9.71 SS G_CDS: -3.70 Total: -13.41 kcal Atomic # 14 Polarization: -2.29 SS G_CDS: 2.15 Total: -0.14 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -0.62 Total: -0.74 kcal Total: -29.24 0.20 -29.04 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.898 kcal (2) G-P(sol) polarization free energy of solvation -29.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.134 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.198 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.038 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds