Wall clock time and date at job start Tue Mar 9 2021 12:58:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34232 * 117.00183 * 2 1 4 4 O 1.20823 * 119.99876 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99991 * 179.97438 * 3 2 1 6 6 H 1.09001 * 112.85020 * 311.20005 * 5 3 2 7 7 C 1.53948 * 113.74344 * 82.40625 * 5 3 2 8 8 C 1.53777 * 87.02269 * 139.94452 * 7 5 3 9 9 C 1.52992 * 113.61645 * 89.22938 * 8 7 5 10 10 N 1.46501 * 109.47078 * 70.72521 * 9 8 7 11 11 C 1.34781 * 120.00077 * 176.36612 * 10 9 8 12 12 O 1.21287 * 119.99778 * 359.97438 * 11 10 9 13 13 C 1.50700 * 120.00282 * 179.97438 * 11 10 9 14 14 O 1.42895 * 109.47183 * 179.97438 * 13 11 10 15 15 C 1.35919 * 116.99907 * 179.97438 * 14 13 11 16 16 C 1.38786 * 120.06145 * 179.97438 * 15 14 13 17 17 Br 1.89106 * 120.03441 * 0.02969 * 16 15 14 18 18 C 1.38236 * 119.93115 * 180.02562 * 16 15 14 19 19 C 1.38238 * 120.04425 * 0.02562 * 18 16 15 20 20 C 1.50705 * 119.93901 * 180.02562 * 19 18 16 21 21 O 1.42897 * 109.47326 * 65.00144 * 20 19 18 22 22 Si 1.86301 * 109.46877 * 184.99481 * 20 19 18 23 23 C 1.38286 * 120.11796 * 359.97401 * 19 18 16 24 24 C 1.38135 * 120.07075 * 359.77053 * 23 19 18 25 25 O 1.42903 * 113.61496 * 220.05079 * 8 7 5 26 26 C 1.42902 * 114.00183 * 165.32384 * 25 8 7 27 27 C 1.53782 * 113.61442 * 180.02562 * 5 3 2 28 28 H 1.08998 * 109.46780 * 59.99746 * 1 2 3 29 29 H 1.08996 * 109.46782 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.47036 * 299.99654 * 1 2 3 31 31 H 1.08999 * 113.61461 * 25.41917 * 7 5 3 32 32 H 1.08997 * 113.66777 * 254.47310 * 7 5 3 33 33 H 1.09008 * 109.47468 * 190.72486 * 9 8 7 34 34 H 1.09002 * 109.47432 * 310.72197 * 9 8 7 35 35 H 0.96994 * 120.00243 * 356.36659 * 10 9 8 36 36 H 1.09004 * 109.46498 * 300.00223 * 13 11 10 37 37 H 1.08994 * 109.47018 * 59.99553 * 13 11 10 38 38 H 1.08003 * 119.97612 * 179.97438 * 18 16 15 39 39 H 1.08994 * 109.47111 * 304.99738 * 20 19 18 40 40 H 0.96699 * 114.00210 * 179.97438 * 21 20 19 41 41 H 1.48500 * 109.99784 * 178.68053 * 22 20 19 42 42 H 1.48501 * 110.00209 * 300.00239 * 22 20 19 43 43 H 1.08002 * 119.96160 * 180.02562 * 23 19 18 44 44 H 1.08000 * 120.02425 * 180.25372 * 24 23 19 45 45 H 1.09002 * 109.47303 * 305.18155 * 26 25 8 46 46 H 1.08997 * 109.47532 * 185.17816 * 26 25 8 47 47 H 1.09001 * 109.46677 * 65.17847 * 26 25 8 48 48 H 1.08996 * 113.61685 * 105.38858 * 27 5 3 49 49 H 1.09005 * 113.68627 * 334.49183 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0234 0.6364 0.7567 7 6 4.1957 1.1210 -1.3959 8 6 5.1829 2.2260 -0.9848 9 6 6.4454 1.6969 -0.3017 10 7 7.2816 1.0076 -1.2875 11 6 8.4856 0.5205 -0.9272 12 8 8.8769 0.6532 0.2131 13 6 9.3455 -0.1891 -1.9412 14 8 10.5633 -0.6088 -1.3225 15 6 11.4571 -1.2696 -2.1049 16 6 12.6609 -1.7055 -1.5693 17 35 13.0597 -1.3816 0.2506 18 6 13.5681 -2.3768 -2.3676 19 6 13.2770 -2.6133 -3.6981 20 6 14.2675 -3.3459 -4.5660 21 8 14.4141 -4.6867 -4.0942 22 14 13.6532 -3.3702 -6.3247 23 6 12.0781 -2.1798 -4.2337 24 6 11.1658 -1.5132 -3.4391 25 8 5.4667 3.1581 -2.0302 26 6 6.1046 4.3562 -1.5833 27 6 4.1078 2.7142 0.0011 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 3.5301 1.4105 -2.2091 32 1 4.6678 0.1522 -1.5588 33 1 7.0022 2.5296 0.1282 34 1 6.1662 1.0000 0.4886 35 1 6.9689 0.9017 -2.1996 36 1 8.8128 -1.0598 -2.3235 37 1 9.5713 0.4889 -2.7641 38 1 14.5054 -2.7160 -1.9516 39 1 15.2314 -2.8388 -4.5249 40 1 15.0379 -5.2183 -4.6073 41 1 14.6363 -4.0621 -7.1965 42 1 12.3394 -4.0590 -6.3943 43 1 11.8530 -2.3663 -5.2735 44 1 10.2279 -1.1786 -3.8572 45 1 5.5043 4.8165 -0.7985 46 1 6.2029 5.0490 -2.4190 47 1 7.0932 4.1170 -1.1915 48 1 4.5093 3.0293 0.9642 49 1 3.4190 3.4413 -0.4288 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15102698_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:20 Heat of formation + Delta-G solvation = -158.469212 kcal Electronic energy + Delta-G solvation = -34663.912734 eV Core-core repulsion = 29606.538032 eV Total energy + Delta-G solvation = -5057.374702 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 444.075 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.25306 -41.62417 -40.92583 -40.16510 -38.98863 -37.71607 -37.38805 -36.85219 -35.51400 -33.62974 -32.05436 -30.91628 -30.27410 -29.43931 -28.21367 -27.90750 -26.70370 -26.24439 -25.45196 -23.91213 -22.27434 -22.09932 -21.61498 -20.16072 -19.55734 -19.24217 -18.60135 -18.45222 -18.05799 -17.55038 -17.50845 -17.34769 -17.03924 -16.70880 -16.65018 -16.14949 -16.06382 -15.94344 -15.70985 -15.52476 -15.40637 -14.85852 -14.61485 -14.54086 -14.32938 -14.21758 -14.02455 -13.95540 -13.69808 -13.52481 -13.47589 -13.24931 -12.95000 -12.76449 -12.63319 -12.58946 -12.28175 -12.09680 -12.05546 -11.86801 -11.83493 -11.77985 -11.57560 -11.43594 -11.19584 -11.07634 -10.64395 -10.47634 -10.24198 -9.94943 -9.30239 -4.89172 -0.04138 0.13650 0.64829 1.02375 1.33300 1.38203 1.47167 1.64480 1.66176 1.98562 2.37498 2.40512 2.72830 3.13540 3.26620 3.34341 3.36220 3.39856 3.54868 3.66511 3.81841 3.89788 3.90608 4.06141 4.09680 4.11163 4.12407 4.25312 4.27287 4.29650 4.30099 4.42806 4.49737 4.51403 4.57660 4.61796 4.63606 4.65886 4.68516 4.79232 4.85791 4.86987 4.91358 5.00542 5.04448 5.24471 5.27149 5.31142 5.48834 6.06945 6.09585 6.43204 6.60366 6.61908 7.11769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.361 6.361 3 C 0.471 3.529 4 O -0.538 6.538 5 C -0.108 4.108 6 H 0.152 0.848 7 C -0.093 4.093 8 C 0.086 3.914 9 C 0.118 3.882 10 N -0.703 5.703 11 C 0.515 3.485 12 O -0.566 6.566 13 C 0.031 3.969 14 O -0.303 6.303 15 C 0.150 3.850 16 C -0.144 4.144 17 Br -0.052 7.052 18 C -0.036 4.036 19 C -0.115 4.115 20 C -0.087 4.087 21 O -0.560 6.560 22 Si 0.773 3.227 23 C -0.058 4.058 24 C -0.189 4.189 25 O -0.374 6.374 26 C 0.023 3.977 27 C -0.137 4.137 28 H 0.062 0.938 29 H 0.129 0.871 30 H 0.060 0.940 31 H 0.097 0.903 32 H 0.115 0.885 33 H 0.071 0.929 34 H 0.089 0.911 35 H 0.421 0.579 36 H 0.131 0.869 37 H 0.132 0.868 38 H 0.138 0.862 39 H 0.093 0.907 40 H 0.395 0.605 41 H -0.291 1.291 42 H -0.287 1.287 43 H 0.161 0.839 44 H 0.181 0.819 45 H 0.048 0.952 46 H 0.097 0.903 47 H 0.045 0.955 48 H 0.095 0.905 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.626 0.047 -8.388 8.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.277 6.277 3 C 0.316 3.684 4 O -0.427 6.427 5 C -0.127 4.127 6 H 0.170 0.830 7 C -0.130 4.130 8 C 0.046 3.954 9 C -0.007 4.007 10 N -0.358 5.358 11 C 0.302 3.698 12 O -0.444 6.444 13 C -0.046 4.046 14 O -0.216 6.216 15 C 0.102 3.898 16 C -0.224 4.224 17 Br 0.033 6.967 18 C -0.056 4.056 19 C -0.116 4.116 20 C -0.195 4.195 21 O -0.370 6.370 22 Si 0.678 3.322 23 C -0.076 4.076 24 C -0.207 4.207 25 O -0.292 6.292 26 C -0.073 4.073 27 C -0.175 4.175 28 H 0.080 0.920 29 H 0.147 0.853 30 H 0.078 0.922 31 H 0.116 0.884 32 H 0.133 0.867 33 H 0.089 0.911 34 H 0.108 0.892 35 H 0.259 0.741 36 H 0.149 0.851 37 H 0.150 0.850 38 H 0.156 0.844 39 H 0.111 0.889 40 H 0.246 0.754 41 H -0.218 1.218 42 H -0.215 1.215 43 H 0.178 0.822 44 H 0.198 0.802 45 H 0.067 0.933 46 H 0.115 0.885 47 H 0.064 0.936 48 H 0.114 0.886 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -2.139 0.302 -7.095 7.416 hybrid contribution 0.204 -0.848 0.246 0.907 sum -1.934 -0.546 -6.849 7.137 Atomic orbital electron populations 1.23535 0.75007 1.05660 1.02441 1.86515 1.24760 1.32972 1.83452 1.23913 0.92432 0.81049 0.71019 1.90680 1.67883 1.37528 1.46645 1.22506 0.86259 1.01159 1.02793 0.83046 1.23037 0.96114 0.99402 0.94441 1.22950 0.91894 0.91320 0.89246 1.21581 0.89979 0.97500 0.91594 1.45452 1.17081 1.57866 1.15426 1.20421 0.81992 0.78831 0.88602 1.90801 1.72832 1.58336 1.22442 1.22855 0.84148 1.02349 0.95290 1.86239 1.27699 1.69838 1.37784 1.18767 0.88384 0.92119 0.90568 1.21249 0.97589 1.10830 0.92741 1.96749 1.94313 1.95467 1.10158 1.20887 0.98133 0.93705 0.92846 1.19407 0.96661 1.01645 0.93869 1.25077 1.01961 0.83943 1.08552 1.86555 1.68405 1.23403 1.58677 0.94157 0.76816 0.89557 0.71695 1.21239 0.91292 0.94300 1.00746 1.21539 1.03394 1.04817 0.91001 1.87954 1.79941 1.28994 1.32346 1.22874 0.96433 0.86369 1.01617 1.23544 0.97261 0.95252 1.01475 0.91966 0.85272 0.92155 0.88438 0.86656 0.91115 0.89250 0.74065 0.85123 0.85001 0.84434 0.88892 0.75440 1.21828 1.21466 0.82204 0.80181 0.93326 0.88461 0.93641 0.88630 0.88587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.50 10.57 -51.44 -0.54 -1.04 16 3 C 0.47 1.20 7.49 71.24 0.53 1.74 16 4 O -0.54 -5.03 15.65 21.97 0.34 -4.69 16 5 C -0.11 0.46 3.91 -10.96 -0.04 0.42 16 6 H 0.15 -1.25 7.60 -2.39 -0.02 -1.27 16 7 C -0.09 0.64 7.03 31.18 0.22 0.86 16 8 C 0.09 -0.47 0.77 -10.26 -0.01 -0.48 16 9 C 0.12 -0.54 4.70 86.38 0.41 -0.13 16 10 N -0.70 4.40 5.47 -463.05 -2.53 1.87 16 11 C 0.52 0.09 7.91 87.66 0.69 0.79 16 12 O -0.57 -6.70 16.50 15.98 0.26 -6.44 16 13 C 0.03 -0.17 5.22 71.24 0.37 0.20 16 14 O -0.30 -1.33 9.00 -73.60 -0.66 -1.99 16 15 C 0.15 0.42 6.68 22.52 0.15 0.57 16 16 C -0.14 -0.92 6.24 22.40 0.14 -0.78 16 17 Br -0.05 -0.50 33.16 -20.37 -0.68 -1.17 16 18 C -0.04 -0.15 9.42 22.27 0.21 0.06 16 19 C -0.11 -0.04 5.38 -19.85 -0.11 -0.15 16 20 C -0.09 0.22 2.79 71.24 0.20 0.42 16 21 O -0.56 -0.56 12.81 -148.98 -1.91 -2.47 16 22 Si 0.77 -4.20 29.85 68.60 2.05 -2.15 16 23 C -0.06 0.21 8.66 22.26 0.19 0.40 16 24 C -0.19 0.80 9.04 22.36 0.20 1.00 16 25 O -0.37 1.05 10.59 -148.98 -1.58 -0.53 16 26 C 0.02 -0.10 10.53 113.37 1.19 1.09 16 27 C -0.14 0.46 5.97 31.13 0.19 0.64 16 28 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 29 H 0.13 -0.97 8.14 -2.39 -0.02 -0.99 16 30 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 31 H 0.10 -0.48 8.10 -2.39 -0.02 -0.50 16 32 H 0.12 -1.28 8.10 -2.39 -0.02 -1.30 16 33 H 0.07 -0.12 7.04 -2.38 -0.02 -0.13 16 34 H 0.09 -0.43 7.30 -2.39 -0.02 -0.45 16 35 H 0.42 -5.03 8.48 -92.71 -0.79 -5.82 16 36 H 0.13 -1.61 7.65 -2.39 -0.02 -1.63 16 37 H 0.13 -1.63 7.67 -2.39 -0.02 -1.65 16 38 H 0.14 0.50 8.06 -2.91 -0.02 0.48 16 39 H 0.09 -0.54 7.96 -2.39 -0.02 -0.56 16 40 H 0.40 -2.71 8.74 -74.06 -0.65 -3.36 16 41 H -0.29 0.08 7.11 99.48 0.71 0.78 16 42 H -0.29 -0.07 7.05 99.48 0.70 0.63 16 43 H 0.16 -1.41 4.86 -2.91 -0.01 -1.43 16 44 H 0.18 -2.32 6.30 -2.91 -0.02 -2.33 16 45 H 0.05 -0.21 7.48 -2.39 -0.02 -0.23 16 46 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 47 H 0.04 -0.19 7.04 -2.39 -0.02 -0.21 16 48 H 0.10 -0.48 8.10 -2.39 -0.02 -0.50 16 49 H 0.10 0.08 7.44 -2.38 -0.02 0.07 16 Total: 0.00 -32.09 430.50 0.11 -31.97 By element: Atomic # 1 Polarization: -20.79 SS G_CDS: -0.38 Total: -21.17 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: 5.74 Total: 7.81 kcal Atomic # 7 Polarization: 4.40 SS G_CDS: -2.53 Total: 1.87 kcal Atomic # 8 Polarization: -13.07 SS G_CDS: -4.08 Total: -17.16 kcal Atomic # 14 Polarization: -4.20 SS G_CDS: 2.05 Total: -2.15 kcal Atomic # 35 Polarization: -0.50 SS G_CDS: -0.68 Total: -1.17 kcal Total: -32.09 0.11 -31.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.495 kcal (2) G-P(sol) polarization free energy of solvation -32.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.582 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.974 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.469 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds