Wall clock time and date at job start Tue Mar 9 2021 12:58:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34237 * 116.99796 * 2 1 4 4 O 1.20815 * 119.99962 * 0.02562 * 3 2 1 5 5 C 1.50698 * 119.99645 * 180.02562 * 3 2 1 6 6 H 1.09002 * 112.84850 * 311.19056 * 5 3 2 7 7 C 1.53775 * 113.69493 * 82.46301 * 5 3 2 8 8 C 1.53784 * 87.08288 * 139.99304 * 7 5 3 9 9 C 1.52993 * 113.61430 * 89.11611 * 8 7 5 10 10 N 1.46501 * 109.47086 * 77.69140 * 9 8 7 11 11 C 1.34781 * 120.00111 * 175.05679 * 10 9 8 12 12 O 1.21689 * 119.99755 * 359.97438 * 11 10 9 13 13 C 1.46677 * 120.00242 * 179.97438 * 11 10 9 14 14 C 1.37869 * 126.23519 * 179.97438 * 13 11 10 15 15 C 1.39831 * 107.08582 * 180.02562 * 14 13 11 16 16 C 1.35456 * 107.86465 * 0.02562 * 15 14 13 17 17 C 1.50705 * 125.56336 * 179.97438 * 16 15 14 18 18 O 1.42900 * 109.46980 * 120.02288 * 17 16 15 19 19 Si 1.86304 * 109.46932 * 0.02562 * 17 16 15 20 20 N 1.35525 * 108.87374 * 0.22563 * 16 15 14 21 21 O 1.42905 * 113.68892 * 220.00957 * 8 7 5 22 22 C 1.42898 * 113.99729 * 164.92981 * 21 8 7 23 23 C 1.53776 * 113.61401 * 180.02562 * 5 3 2 24 24 H 1.09001 * 109.47464 * 59.99841 * 1 2 3 25 25 H 1.08996 * 109.47076 * 180.02562 * 1 2 3 26 26 H 1.08999 * 109.47303 * 300.00207 * 1 2 3 27 27 H 1.08998 * 113.61371 * 25.44359 * 7 5 3 28 28 H 1.09008 * 113.61471 * 254.53977 * 7 5 3 29 29 H 1.08995 * 109.47486 * 317.68447 * 9 8 7 30 30 H 1.09000 * 109.47038 * 197.68620 * 9 8 7 31 31 H 0.96999 * 119.99972 * 355.04550 * 10 9 8 32 32 H 1.07994 * 126.45679 * 0.02609 * 14 13 11 33 33 H 1.07997 * 126.07322 * 180.02562 * 15 14 13 34 34 H 1.08997 * 109.46923 * 240.02553 * 17 16 15 35 35 H 0.96701 * 114.00220 * 299.99970 * 18 17 16 36 36 H 1.48506 * 109.99555 * 179.97438 * 19 17 16 37 37 H 1.48497 * 110.00132 * 301.31484 * 19 17 16 38 38 H 0.97000 * 125.67888 * 179.75575 * 20 16 15 39 39 H 1.08996 * 109.47241 * 304.22293 * 22 21 8 40 40 H 1.09004 * 109.47190 * 64.22667 * 22 21 8 41 41 H 1.09001 * 109.46961 * 184.22463 * 22 21 8 42 42 H 1.09008 * 113.61811 * 105.38495 * 23 5 3 43 43 H 1.09001 * 113.68921 * 334.48794 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0238 0.6363 0.7550 7 6 4.1925 1.1231 -1.3968 8 6 5.1821 2.2265 -0.9868 9 6 6.4443 1.6952 -0.3047 10 7 7.3541 1.1518 -1.3163 11 6 8.5781 0.7163 -0.9576 12 8 8.9277 0.7749 0.2066 13 6 9.4888 0.1718 -1.9702 14 6 10.7625 -0.3069 -1.7478 15 6 11.2662 -0.7241 -2.9837 16 6 10.3128 -0.4976 -3.9189 17 6 10.4382 -0.8009 -5.3898 18 8 9.4211 -1.7286 -5.7732 19 14 12.1138 -1.5405 -5.7307 20 7 9.2298 0.0515 -3.3169 21 8 5.4665 3.1597 -2.0310 22 6 6.0990 4.3597 -1.5817 23 6 4.1077 2.7142 0.0001 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3634 0.5139 0.8899 27 1 3.5257 1.4142 -2.2084 28 1 4.6631 0.1537 -1.5613 29 1 6.1731 0.9091 0.3999 30 1 6.9380 2.5072 0.2292 31 1 7.0755 1.1053 -2.2443 32 1 11.2746 -0.3512 -0.7981 33 1 12.2421 -1.1512 -3.1613 34 1 10.3243 0.1200 -5.9616 35 1 9.4614 -2.5728 -5.3033 36 1 12.2497 -1.8447 -7.1779 37 1 13.1806 -0.5984 -5.3069 38 1 8.4082 0.3139 -3.7607 39 1 5.4861 4.8268 -0.8109 40 1 7.0802 4.1214 -1.1710 41 1 6.2132 5.0462 -2.4206 42 1 4.5099 3.0290 0.9631 43 1 3.4186 3.4416 -0.4290 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15102698_6580494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:29 Heat of formation + Delta-G solvation = -115.912865 kcal Electronic energy + Delta-G solvation = -27870.654228 eV Core-core repulsion = 23691.962951 eV Total energy + Delta-G solvation = -4178.691277 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.145 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.57491 -42.21660 -40.86977 -39.83225 -37.79419 -37.69998 -36.92009 -35.56457 -32.28228 -31.53036 -29.98732 -28.68709 -28.31637 -27.04544 -26.56289 -25.52449 -23.09004 -22.16459 -21.54773 -21.18154 -20.45307 -19.69540 -19.18901 -18.26901 -18.05804 -17.53073 -17.18351 -16.90109 -16.70284 -16.56407 -16.34562 -16.15270 -15.80167 -15.60301 -15.16567 -14.96554 -14.72838 -14.51316 -14.36623 -14.28132 -14.01542 -13.92443 -13.68458 -13.58620 -13.35922 -13.06439 -12.86939 -12.72736 -12.25794 -12.23098 -12.07149 -11.83362 -11.65938 -11.48076 -11.27746 -10.82947 -10.75093 -10.32473 -10.08433 -9.26850 -5.07037 0.34696 1.07577 1.10319 1.52081 1.59808 1.63456 1.80755 1.86057 2.13583 2.35897 2.54140 2.99139 3.10633 3.19027 3.23921 3.26763 3.52160 3.75151 3.83353 3.91847 4.12304 4.15124 4.20556 4.20756 4.24849 4.26120 4.30838 4.36332 4.41812 4.44965 4.46647 4.54910 4.56694 4.68836 4.72143 4.88607 4.98569 5.06921 5.14834 5.32264 5.57754 5.81454 5.92177 6.18266 6.35665 6.38003 6.66512 7.06128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.101 4.101 8 C 0.075 3.925 9 C 0.116 3.884 10 N -0.725 5.725 11 C 0.591 3.409 12 O -0.525 6.525 13 C -0.052 4.052 14 C -0.097 4.097 15 C -0.201 4.201 16 C 0.023 3.977 17 C -0.056 4.056 18 O -0.543 6.543 19 Si 0.722 3.278 20 N -0.522 5.522 21 O -0.365 6.365 22 C 0.026 3.974 23 C -0.134 4.134 24 H 0.064 0.936 25 H 0.104 0.896 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.093 0.907 29 H 0.086 0.914 30 H 0.082 0.918 31 H 0.400 0.600 32 H 0.153 0.847 33 H 0.151 0.849 34 H 0.115 0.885 35 H 0.383 0.617 36 H -0.254 1.254 37 H -0.253 1.253 38 H 0.417 0.583 39 H 0.048 0.952 40 H 0.045 0.955 41 H 0.090 0.910 42 H 0.088 0.912 43 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.126 -3.099 -1.399 3.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.138 4.138 8 C 0.034 3.966 9 C -0.008 4.008 10 N -0.378 5.378 11 C 0.379 3.621 12 O -0.400 6.400 13 C -0.165 4.165 14 C -0.123 4.123 15 C -0.225 4.225 16 C -0.095 4.095 17 C -0.166 4.166 18 O -0.349 6.349 19 Si 0.622 3.378 20 N -0.119 5.119 21 O -0.283 6.283 22 C -0.070 4.070 23 C -0.172 4.172 24 H 0.083 0.917 25 H 0.122 0.878 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.112 0.888 29 H 0.104 0.896 30 H 0.100 0.900 31 H 0.235 0.765 32 H 0.171 0.829 33 H 0.169 0.831 34 H 0.133 0.867 35 H 0.231 0.769 36 H -0.178 1.178 37 H -0.177 1.177 38 H 0.255 0.745 39 H 0.067 0.933 40 H 0.063 0.937 41 H 0.108 0.892 42 H 0.107 0.893 43 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 0.258 -2.145 -1.596 2.686 hybrid contribution -1.218 0.878 -0.232 1.519 sum -0.960 -1.267 -1.828 2.423 Atomic orbital electron populations 1.23339 0.75770 1.04096 1.02776 1.86514 1.23844 1.33131 1.83776 1.23328 0.91368 0.81522 0.72264 1.90694 1.66861 1.36436 1.44797 1.22324 0.88213 1.00934 1.01375 0.84972 1.23025 0.96685 0.98675 0.95462 1.23099 0.92397 0.91370 0.89694 1.21621 0.88699 0.99614 0.90865 1.45664 1.15306 1.64865 1.11944 1.17044 0.80408 0.77347 0.87316 1.90880 1.75439 1.55752 1.17951 1.20396 0.98457 1.14768 0.82908 1.21327 0.92380 0.99733 0.98881 1.20716 1.00161 1.09457 0.92174 1.21160 0.88947 1.03797 0.95615 1.24979 1.05153 0.96882 0.89586 1.86502 1.53368 1.28521 1.66495 0.94004 0.73015 0.88629 0.82170 1.41957 1.15375 1.47757 1.06792 1.87957 1.80060 1.28463 1.31861 1.22807 0.96590 0.86381 1.01243 1.23576 0.97311 0.95380 1.00916 0.91701 0.87756 0.91676 0.87833 0.88850 0.89554 0.89951 0.76548 0.82942 0.83135 0.86746 0.76870 1.17849 1.17713 0.74516 0.93288 0.93668 0.89195 0.89318 0.86827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.34 10.57 -39.28 -0.41 -0.75 16 3 C 0.47 0.64 7.49 36.00 0.27 0.91 16 4 O -0.50 -2.16 15.65 -18.74 -0.29 -2.45 16 5 C -0.11 0.17 3.90 -90.97 -0.36 -0.18 16 6 H 0.13 -0.44 7.61 -51.93 -0.40 -0.84 16 7 C -0.10 0.22 7.05 -25.92 -0.18 0.04 16 8 C 0.07 -0.13 0.84 -89.79 -0.08 -0.21 16 9 C 0.12 -0.15 4.56 -4.04 -0.02 -0.17 16 10 N -0.73 0.64 5.43 -61.62 -0.33 0.30 16 11 C 0.59 1.19 7.79 -12.85 -0.10 1.09 16 12 O -0.52 -2.94 16.88 5.20 0.09 -2.85 16 13 C -0.05 -0.06 7.06 -81.98 -0.58 -0.63 16 14 C -0.10 -0.12 10.65 -39.12 -0.42 -0.54 16 15 C -0.20 0.08 9.32 -39.98 -0.37 -0.30 16 16 C 0.02 -0.02 6.47 -81.95 -0.53 -0.55 16 17 C -0.06 0.10 3.08 36.01 0.11 0.21 16 18 O -0.54 0.89 12.88 -35.23 -0.45 0.44 16 19 Si 0.72 -1.78 30.54 -169.99 -5.19 -6.97 16 20 N -0.52 0.53 5.99 -5.69 -0.03 0.50 16 21 O -0.36 0.14 10.33 -35.23 -0.36 -0.22 16 22 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 23 C -0.13 0.19 5.96 -25.90 -0.15 0.04 16 24 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 25 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 26 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 27 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 28 H 0.09 -0.31 8.10 -51.92 -0.42 -0.73 16 29 H 0.09 -0.15 7.31 -51.93 -0.38 -0.53 16 30 H 0.08 -0.04 7.35 -51.93 -0.38 -0.42 16 31 H 0.40 -0.99 7.45 -40.82 -0.30 -1.30 16 32 H 0.15 0.16 8.06 -52.49 -0.42 -0.27 16 33 H 0.15 -0.35 6.17 -52.49 -0.32 -0.68 16 34 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 35 H 0.38 -1.97 8.70 45.56 0.40 -1.58 16 36 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 37 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 38 H 0.42 -1.22 8.19 -40.82 -0.33 -1.56 16 39 H 0.05 -0.09 7.49 -51.93 -0.39 -0.48 16 40 H 0.04 -0.06 7.16 -51.93 -0.37 -0.43 16 41 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 42 H 0.09 -0.22 8.10 -51.92 -0.42 -0.64 16 43 H 0.11 0.02 7.44 -51.93 -0.39 -0.36 16 LS Contribution 365.52 15.07 5.51 5.51 Total: 0.00 -9.79 365.52 -7.62 -17.41 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -5.86 Total: -12.68 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -0.27 Total: 1.77 kcal Atomic # 7 Polarization: 1.17 SS G_CDS: -0.37 Total: 0.80 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -1.44 Total: -5.84 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.19 Total: -6.97 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -9.79 -7.62 -17.41 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15102698_6580494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.504 kcal (2) G-P(sol) polarization free energy of solvation -9.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.296 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.617 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.409 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds