Wall clock time and date at job start Tue Mar 9 2021 20:10:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86301 * 109.46973 * 2 1 4 4 C 1.50700 * 109.47292 * 239.99874 * 2 1 3 5 5 C 1.36454 * 120.29380 * 240.00205 * 4 2 1 6 6 C 1.40092 * 119.25281 * 180.02562 * 5 4 2 7 7 C 1.40846 * 132.86335 * 179.97438 * 6 5 4 8 8 C 1.46561 * 126.58456 * 359.97438 * 7 6 5 9 9 O 1.21721 * 119.99763 * 359.97438 * 8 7 6 10 10 N 1.34780 * 120.00562 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00219 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.90787 * 23.74787 * 11 10 8 13 13 C 1.53784 * 113.61087 * 154.99857 * 11 10 8 14 14 C 1.53787 * 87.07938 * 89.11628 * 13 11 10 15 15 H 1.08997 * 113.61282 * 270.79512 * 14 13 11 16 16 N 1.46500 * 113.61330 * 139.97673 * 14 13 11 17 17 C 1.34947 * 126.04040 * 275.00304 * 16 14 13 18 18 C 1.35311 * 107.75028 * 180.02562 * 17 16 14 19 19 C 1.39876 * 107.91749 * 359.97438 * 18 17 16 20 20 N 1.30834 * 108.20073 * 0.27043 * 19 18 17 21 21 C 1.53778 * 113.61261 * 252.49454 * 11 10 8 22 22 C 1.40556 * 106.83983 * 180.26148 * 7 6 5 23 23 N 1.30744 * 108.74172 * 359.59357 * 22 7 6 24 24 N 1.36581 * 120.22772 * 359.97438 * 6 5 4 25 25 C 1.36236 * 120.08462 * 0.02562 * 24 6 5 26 26 C 1.35189 * 120.70637 * 359.95713 * 25 24 6 27 27 H 0.96703 * 113.99835 * 60.00379 * 1 2 3 28 28 H 1.09000 * 109.46997 * 119.99962 * 2 1 3 29 29 H 1.48505 * 109.99941 * 59.99771 * 3 2 1 30 30 H 1.48500 * 109.99960 * 181.31462 * 3 2 1 31 31 H 1.08001 * 120.37471 * 0.04381 * 5 4 2 32 32 H 0.97004 * 119.99154 * 0.02562 * 10 8 7 33 33 H 1.08998 * 113.61600 * 334.56738 * 13 11 10 34 34 H 1.09000 * 113.60897 * 203.66161 * 13 11 10 35 35 H 1.08009 * 126.12504 * 0.02894 * 17 16 14 36 36 H 1.07992 * 126.04231 * 179.97438 * 18 17 16 37 37 H 1.08002 * 125.89548 * 179.97438 * 19 18 17 38 38 H 1.09006 * 113.60897 * 156.33365 * 21 11 10 39 39 H 1.09001 * 113.61586 * 25.43910 * 21 11 10 40 40 H 1.08004 * 125.63470 * 179.76230 * 22 7 6 41 41 H 1.07998 * 119.64827 * 179.97438 * 25 24 6 42 42 H 1.07995 * 119.84312 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7162 -1.8204 -1.1122 6 6 3.1716 -2.4634 -2.2705 7 6 3.9761 -3.6000 -2.4820 8 6 4.5773 -4.4491 -1.4497 9 8 4.3985 -4.1952 -0.2728 10 7 5.3290 -5.5104 -1.8035 11 6 5.9304 -6.3587 -0.7715 12 1 5.4006 -6.3097 0.1798 13 6 6.2171 -7.7938 -1.2439 14 6 7.5936 -7.2840 -1.7024 15 1 7.6012 -6.9071 -2.7252 16 7 8.6862 -8.2222 -1.4337 17 6 9.3708 -8.3332 -0.2761 18 6 10.2934 -9.3103 -0.4345 19 6 10.1680 -9.8141 -1.7333 20 7 9.2086 -9.1589 -2.3350 21 6 7.4523 -6.1822 -0.6389 22 6 4.0972 -3.7600 -3.8732 23 7 3.4197 -2.8116 -4.4656 24 7 2.8316 -1.9825 -3.5028 25 6 2.0475 -0.8736 -3.6105 26 6 1.5964 -0.2371 -2.5064 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5614 2.4679 1.2085 30 1 3.5346 1.7703 -0.0320 31 1 2.9831 -2.1991 -0.1366 32 1 5.4724 -5.7120 -2.7414 33 1 5.5770 -8.1197 -2.0637 34 1 6.2684 -8.5188 -0.4316 35 1 9.2109 -7.7471 0.6169 36 1 11.0014 -9.6424 0.3102 37 1 10.7637 -10.6040 -2.1664 38 1 7.8412 -6.4666 0.3389 39 1 7.8093 -5.2071 -0.9703 40 1 4.6553 -4.5394 -4.3708 41 1 1.7833 -0.4991 -4.5885 42 1 0.9753 0.6405 -2.6081 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15494482_11618758.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:10:40 Heat of formation + Delta-G solvation = 159.059541 kcal Electronic energy + Delta-G solvation = -28044.497501 eV Core-core repulsion = 23996.368064 eV Total energy + Delta-G solvation = -4048.129438 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.132 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -43.37526 -42.30902 -40.90103 -39.54011 -38.97383 -37.32432 -34.66993 -34.24050 -32.20031 -32.07277 -30.91583 -30.28686 -27.45598 -27.09312 -26.10779 -25.03250 -23.93208 -23.16854 -22.18860 -21.94151 -21.40559 -20.20971 -19.28802 -18.61426 -18.48129 -17.95758 -17.54027 -17.08697 -17.02873 -16.63782 -16.26499 -15.95816 -15.74984 -15.49396 -15.40262 -15.32629 -14.94174 -14.69361 -14.30839 -14.29081 -14.08729 -13.96486 -13.64359 -13.58114 -13.36487 -13.24460 -13.05729 -12.48618 -12.21962 -12.14129 -12.02520 -11.89317 -11.58815 -11.46885 -10.91315 -10.87160 -10.39112 -10.29232 -10.20846 -9.46887 -8.85400 -5.22598 -0.63415 -0.21860 0.92464 0.97593 1.00052 1.07264 1.53229 1.56392 1.82934 1.98540 2.00791 2.03543 2.47035 2.97676 2.98223 3.10707 3.22279 3.27122 3.38391 3.50081 3.57835 3.65627 3.77330 3.87152 3.89349 4.03950 4.04105 4.16851 4.23315 4.29263 4.38870 4.43440 4.51078 4.60558 4.65212 4.68271 4.75132 4.81280 4.93646 5.00298 5.07692 5.16282 5.17719 5.41590 5.56753 5.78930 6.11611 6.22940 6.32993 6.44676 6.84241 7.25318 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.699 3.301 4 C -0.066 4.066 5 C -0.098 4.098 6 C 0.172 3.828 7 C -0.320 4.320 8 C 0.607 3.393 9 O -0.545 6.545 10 N -0.715 5.715 11 C 0.132 3.868 12 H 0.118 0.882 13 C -0.152 4.152 14 C 0.137 3.863 15 H 0.121 0.879 16 N -0.363 5.363 17 C 0.053 3.947 18 C -0.274 4.274 19 C 0.045 3.955 20 N -0.298 5.298 21 C -0.157 4.157 22 C 0.121 3.879 23 N -0.311 5.311 24 N -0.266 5.266 25 C 0.123 3.877 26 C -0.157 4.157 27 H 0.379 0.621 28 H 0.123 0.877 29 H -0.246 1.246 30 H -0.254 1.254 31 H 0.161 0.839 32 H 0.400 0.600 33 H 0.088 0.912 34 H 0.104 0.896 35 H 0.172 0.828 36 H 0.148 0.852 37 H 0.183 0.817 38 H 0.103 0.897 39 H 0.089 0.911 40 H 0.199 0.801 41 H 0.180 0.820 42 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.679 3.877 -1.904 4.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.178 4.178 3 Si 0.598 3.402 4 C -0.072 4.072 5 C -0.117 4.117 6 C 0.051 3.949 7 C -0.334 4.334 8 C 0.396 3.604 9 O -0.423 6.423 10 N -0.366 5.366 11 C 0.026 3.974 12 H 0.136 0.864 13 C -0.192 4.192 14 C 0.035 3.965 15 H 0.138 0.862 16 N -0.146 5.146 17 C -0.093 4.093 18 C -0.303 4.303 19 C -0.142 4.142 20 N -0.119 5.119 21 C -0.197 4.197 22 C -0.060 4.060 23 N -0.131 5.131 24 N -0.030 5.030 25 C -0.003 4.003 26 C -0.178 4.178 27 H 0.226 0.774 28 H 0.140 0.860 29 H -0.170 1.170 30 H -0.179 1.179 31 H 0.179 0.821 32 H 0.235 0.765 33 H 0.106 0.894 34 H 0.122 0.878 35 H 0.190 0.810 36 H 0.166 0.834 37 H 0.200 0.800 38 H 0.122 0.878 39 H 0.107 0.893 40 H 0.215 0.785 41 H 0.197 0.803 42 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -2.308 4.981 -2.432 6.004 hybrid contribution 1.061 -1.320 1.049 1.992 sum -1.247 3.661 -1.383 4.107 Atomic orbital electron populations 1.86614 1.16275 1.81656 1.49099 1.25172 0.85625 1.10347 0.96700 0.94994 0.81468 0.75929 0.87816 1.20525 0.95804 0.94904 0.95957 1.20706 0.98380 0.94554 0.98094 1.19254 0.95488 0.93970 0.86225 1.19533 1.16486 1.03911 0.93495 1.16814 0.76934 0.79251 0.87361 1.90795 1.61468 1.71523 1.18561 1.45384 1.52711 1.29062 1.09447 1.21556 0.92855 0.89448 0.93568 0.86407 1.23879 0.95453 0.96830 1.03006 1.22999 0.83938 0.88458 1.01150 0.86162 1.48713 1.27795 1.28771 1.09273 1.22494 0.94815 1.00151 0.91844 1.21564 1.06108 1.03450 0.99188 1.23949 0.96497 0.99783 0.93930 1.77374 1.13938 1.04577 1.15993 1.23957 0.97218 0.98959 0.99565 1.24071 0.94275 0.95755 0.91897 1.77654 1.18268 1.06518 1.10681 1.46102 1.32120 1.19049 1.05750 1.21616 0.91726 0.85008 1.01984 1.20734 1.04155 1.02694 0.90212 0.77384 0.85970 1.17027 1.17868 0.82119 0.76513 0.89351 0.87760 0.81045 0.83444 0.79998 0.87825 0.89257 0.78480 0.80275 0.81510 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.80 12.88 -35.23 -0.45 0.35 16 2 C -0.07 0.12 2.84 36.01 0.10 0.23 16 3 Si 0.70 -1.86 31.96 -169.99 -5.43 -7.30 16 4 C -0.07 0.08 4.53 -104.54 -0.47 -0.39 16 5 C -0.10 -0.14 9.35 -39.53 -0.37 -0.51 16 6 C 0.17 0.40 6.76 -84.07 -0.57 -0.17 16 7 C -0.32 -0.60 6.17 -104.68 -0.65 -1.24 16 8 C 0.61 1.33 7.78 -12.90 -0.10 1.23 16 9 O -0.55 -2.96 15.31 5.17 0.08 -2.88 16 10 N -0.71 0.84 5.25 -54.36 -0.29 0.55 16 11 C 0.13 -0.19 4.32 -67.12 -0.29 -0.48 16 12 H 0.12 0.00 7.46 -51.93 -0.39 -0.39 16 13 C -0.15 0.29 7.63 -25.91 -0.20 0.09 16 14 C 0.14 -0.15 4.91 -67.12 -0.33 -0.48 16 15 H 0.12 -0.20 8.14 -51.93 -0.42 -0.63 16 16 N -0.36 -0.59 3.81 -54.07 -0.21 -0.80 16 17 C 0.05 0.03 10.69 -17.23 -0.18 -0.15 16 18 C -0.27 -0.33 10.80 -40.01 -0.43 -0.77 16 19 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 20 N -0.30 -1.17 12.58 30.63 0.39 -0.78 16 21 C -0.16 0.31 7.23 -25.92 -0.19 0.12 16 22 C 0.12 0.01 11.44 -17.14 -0.20 -0.18 16 23 N -0.31 -0.61 12.57 30.75 0.39 -0.23 16 24 N -0.27 -0.34 3.86 -10.55 -0.04 -0.38 16 25 C 0.12 -0.27 11.17 -16.68 -0.19 -0.46 16 26 C -0.16 0.60 8.38 -39.95 -0.33 0.26 16 27 H 0.38 -2.36 8.08 45.56 0.37 -1.99 16 28 H 0.12 -0.12 7.71 -51.93 -0.40 -0.52 16 29 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 30 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 31 H 0.16 0.34 7.01 -52.49 -0.37 -0.03 16 32 H 0.40 -1.50 7.62 -40.82 -0.31 -1.81 16 33 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.17 -0.41 6.69 -52.48 -0.35 -0.76 16 36 H 0.15 -0.10 8.06 -52.49 -0.42 -0.52 16 37 H 0.18 -0.09 8.06 -52.49 -0.42 -0.51 16 38 H 0.10 -0.29 6.32 -51.93 -0.33 -0.62 16 39 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 40 H 0.20 -0.81 7.46 -52.48 -0.39 -1.20 16 41 H 0.18 -0.94 8.06 -52.49 -0.42 -1.36 16 42 H 0.17 -1.40 7.31 -52.49 -0.38 -1.78 16 LS Contribution 360.85 15.07 5.44 5.44 Total: 0.00 -12.97 360.85 -9.44 -22.41 By element: Atomic # 1 Polarization: -8.68 SS G_CDS: -4.71 Total: -13.39 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -4.60 Total: -3.00 kcal Atomic # 7 Polarization: -1.87 SS G_CDS: 0.24 Total: -1.63 kcal Atomic # 8 Polarization: -2.16 SS G_CDS: -0.37 Total: -2.53 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: -5.43 Total: -7.30 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -12.97 -9.44 -22.41 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15494482_11618758.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 181.472 kcal (2) G-P(sol) polarization free energy of solvation -12.971 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 168.501 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.441 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.412 kcal (6) G-S(sol) free energy of system = (1) + (5) 159.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds