Wall clock time and date at job start Tue Mar 9 2021 20:10:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.47296 * 2 1 4 4 C 1.50690 * 109.47207 * 239.99557 * 2 1 3 5 5 C 1.32693 * 124.68964 * 300.00323 * 4 2 1 6 6 C 1.44503 * 113.10311 * 179.97438 * 5 4 2 7 7 C 1.47047 * 123.48949 * 179.97438 * 6 5 4 8 8 O 1.21663 * 119.99776 * 180.02562 * 7 6 5 9 9 N 1.34774 * 120.00558 * 359.97438 * 7 6 5 10 10 C 1.46496 * 120.00099 * 180.02562 * 9 7 6 11 11 H 1.08994 * 112.91109 * 23.75176 * 10 9 7 12 12 C 1.53787 * 113.61210 * 155.00440 * 10 9 7 13 13 C 1.53779 * 87.07963 * 139.97940 * 12 10 9 14 14 H 1.08999 * 113.61062 * 219.93155 * 13 12 10 15 15 N 1.46502 * 113.61301 * 89.11687 * 13 12 10 16 16 C 1.34950 * 126.03385 * 274.71125 * 15 13 12 17 17 C 1.35320 * 107.74377 * 179.84489 * 16 15 13 18 18 C 1.39875 * 107.92076 * 0.42150 * 17 16 15 19 19 N 1.30843 * 108.19924 * 359.73902 * 18 17 16 20 20 C 1.53779 * 87.08402 * 334.56577 * 13 12 10 21 21 C 1.36223 * 113.01798 * 0.23041 * 6 5 4 22 22 Cl 1.73601 * 124.60881 * 179.76581 * 21 6 5 23 23 S 1.70451 * 110.78424 * 359.64704 * 21 6 5 24 24 H 0.96705 * 114.00117 * 300.00226 * 1 2 3 25 25 H 1.08998 * 109.46901 * 119.99475 * 2 1 3 26 26 H 1.48494 * 109.99994 * 178.68139 * 3 2 1 27 27 H 1.48502 * 109.99655 * 299.99875 * 3 2 1 28 28 H 1.08004 * 123.44460 * 359.97438 * 5 4 2 29 29 H 0.97002 * 119.99411 * 0.02562 * 9 7 6 30 30 H 1.08997 * 113.61028 * 254.52900 * 12 10 9 31 31 H 1.08998 * 113.61447 * 25.34434 * 12 10 9 32 32 H 1.07994 * 126.12782 * 359.97438 * 16 15 13 33 33 H 1.07997 * 126.04320 * 180.16373 * 17 16 15 34 34 H 1.07997 * 125.89980 * 179.76626 * 18 17 16 35 35 H 1.09002 * 113.61557 * 270.88569 * 20 13 12 36 36 H 1.09004 * 113.61501 * 139.97990 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2303 5 6 1.6687 -1.9757 -1.5319 6 6 2.2769 -2.4011 -2.7718 7 6 2.1348 -3.7574 -3.3218 8 8 2.6755 -4.0474 -4.3723 9 7 1.4064 -4.6794 -2.6618 10 6 1.2653 -6.0308 -3.2096 11 1 2.0772 -6.3020 -3.8843 12 6 0.9665 -7.0991 -2.1445 13 6 -0.0106 -7.7213 -3.1559 14 1 -0.9349 -8.0820 -2.7048 15 7 0.6120 -8.7071 -4.0430 16 6 1.2626 -8.4397 -5.1947 17 6 1.6896 -9.6158 -5.7099 18 6 1.2778 -10.6379 -4.8483 19 7 0.6317 -10.0943 -3.8488 20 6 -0.1329 -6.3213 -3.7802 21 6 3.0002 -1.4171 -3.3754 22 17 3.8596 -1.6020 -4.8724 23 16 2.9440 0.0214 -2.4627 24 1 -0.3934 0.4417 0.7651 25 1 1.7923 -0.5137 0.8900 26 1 3.5346 1.7702 0.0321 27 1 1.5616 2.4678 -1.2085 28 1 1.0624 -2.6214 -0.9139 29 1 0.9756 -4.4482 -1.8240 30 1 1.8203 -7.7361 -1.9135 31 1 0.4806 -6.7028 -1.2529 32 1 1.4168 -7.4619 -5.6266 33 1 2.2461 -9.7433 -6.6266 34 1 1.4617 -11.6934 -4.9844 35 1 -0.9207 -5.7126 -3.3364 36 1 -0.1666 -6.3304 -4.8696 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15494482_13431040.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:10:59 Heat of formation + Delta-G solvation = 86.100506 kcal Electronic energy + Delta-G solvation = -24027.619735 eV Core-core repulsion = 20248.520732 eV Total energy + Delta-G solvation = -3779.099003 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.043 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.44272 -41.14429 -39.66451 -38.72024 -37.91716 -37.10809 -34.83651 -32.03491 -31.67745 -30.90612 -27.27223 -27.11528 -26.80293 -24.91450 -22.51475 -22.20651 -21.75887 -20.92033 -20.34488 -19.30537 -18.65876 -18.38076 -17.88005 -17.30058 -16.73390 -16.36946 -15.94565 -15.72855 -15.54168 -15.46082 -15.15091 -14.69720 -14.54048 -14.40606 -14.28126 -14.09937 -13.90553 -13.49984 -13.39764 -13.30906 -13.08796 -12.53481 -12.47333 -12.25240 -12.18440 -11.99953 -11.87578 -11.51920 -10.88301 -10.66305 -10.28272 -10.24123 -9.92849 -9.75331 -9.46551 -5.45743 -0.65725 -0.22242 0.37558 0.62034 0.95532 0.99353 1.04197 1.38719 1.48019 1.69246 2.01491 2.06218 2.16536 2.95521 3.00979 3.20313 3.40073 3.45633 3.73440 3.79409 3.80266 3.89982 4.05022 4.09081 4.21489 4.30906 4.32863 4.47663 4.55736 4.61466 4.67324 4.75213 4.82749 4.85807 4.94386 5.19340 5.30106 5.79758 6.12929 6.32028 6.32770 6.84242 7.09558 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.034 4.034 3 Si 0.670 3.330 4 C -0.190 4.190 5 C -0.066 4.066 6 C -0.161 4.161 7 C 0.580 3.420 8 O -0.516 6.516 9 N -0.713 5.713 10 C 0.124 3.876 11 H 0.121 0.879 12 C -0.154 4.154 13 C 0.140 3.860 14 H 0.118 0.882 15 N -0.360 5.360 16 C 0.053 3.947 17 C -0.271 4.271 18 C 0.046 3.954 19 N -0.294 5.294 20 C -0.157 4.157 21 C -0.110 4.110 22 Cl 0.028 6.972 23 S 0.217 5.783 24 H 0.387 0.613 25 H 0.089 0.911 26 H -0.235 1.235 27 H -0.232 1.232 28 H 0.159 0.841 29 H 0.403 0.597 30 H 0.086 0.914 31 H 0.107 0.893 32 H 0.173 0.827 33 H 0.149 0.851 34 H 0.185 0.815 35 H 0.112 0.888 36 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.383 4.593 6.878 8.607 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.147 4.147 3 Si 0.569 3.431 4 C -0.306 4.306 5 C -0.095 4.095 6 C -0.180 4.180 7 C 0.365 3.635 8 O -0.392 6.392 9 N -0.365 5.365 10 C 0.019 3.981 11 H 0.139 0.861 12 C -0.193 4.193 13 C 0.036 3.964 14 H 0.136 0.864 15 N -0.142 5.142 16 C -0.092 4.092 17 C -0.301 4.301 18 C -0.140 4.140 19 N -0.115 5.115 20 C -0.197 4.197 21 C -0.257 4.257 22 Cl 0.057 6.943 23 S 0.481 5.519 24 H 0.236 0.764 25 H 0.107 0.893 26 H -0.158 1.158 27 H -0.155 1.155 28 H 0.176 0.824 29 H 0.238 0.762 30 H 0.105 0.895 31 H 0.126 0.874 32 H 0.190 0.810 33 H 0.167 0.833 34 H 0.202 0.798 35 H 0.130 0.870 36 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -1.377 5.977 5.959 8.552 hybrid contribution -0.283 -1.691 -0.474 1.779 sum -1.660 4.286 5.485 7.157 Atomic orbital electron populations 1.86498 1.16508 1.81857 1.50047 1.23956 0.86106 1.09754 0.94894 0.94636 0.82198 0.78053 0.88261 1.23390 1.07612 0.97922 1.01724 1.20963 0.98954 0.95032 0.94588 1.20181 1.04762 0.95431 0.97591 1.17417 0.78474 0.83478 0.84101 1.90880 1.46502 1.79965 1.21868 1.45737 1.53101 1.11172 1.26493 1.22670 0.97886 0.80927 0.96650 0.86146 1.23830 1.00518 0.97190 0.97740 1.21810 0.96909 0.86521 0.91128 0.86430 1.48362 1.43164 1.04944 1.17736 1.22580 0.96971 1.00833 0.88843 1.21573 1.12144 0.91427 1.04921 1.23973 0.97060 1.00603 0.92356 1.77394 1.23473 0.86859 1.23727 1.23958 0.99008 0.93815 1.02883 1.25582 1.02747 1.00664 0.96662 1.98441 1.72952 1.96973 1.25892 1.83476 1.47099 1.09371 1.11921 0.76400 0.89293 1.15831 1.15475 0.82365 0.76189 0.89507 0.87436 0.80965 0.83340 0.79835 0.87018 0.89498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.46 12.82 -35.23 -0.45 1.01 16 2 C -0.03 0.09 2.94 36.00 0.11 0.20 16 3 Si 0.67 -2.06 30.91 -169.99 -5.25 -7.31 16 4 C -0.19 0.01 5.71 -36.20 -0.21 -0.20 16 5 C -0.07 0.02 9.71 -39.00 -0.38 -0.35 16 6 C -0.16 -0.31 5.98 -104.58 -0.63 -0.94 16 7 C 0.58 1.47 7.79 -12.69 -0.10 1.38 16 8 O -0.52 -2.97 14.51 5.22 0.08 -2.90 16 9 N -0.71 0.63 5.33 -54.21 -0.29 0.35 16 10 C 0.12 -0.11 3.82 -67.12 -0.26 -0.36 16 11 H 0.12 0.15 6.31 -51.93 -0.33 -0.18 16 12 C -0.15 0.30 7.63 -25.92 -0.20 0.10 16 13 C 0.14 -0.10 5.18 -67.12 -0.35 -0.45 16 14 H 0.12 -0.16 8.14 -51.93 -0.42 -0.59 16 15 N -0.36 -0.79 3.79 -54.07 -0.21 -0.99 16 16 C 0.05 0.09 9.62 -17.22 -0.17 -0.07 16 17 C -0.27 -0.55 10.80 -40.01 -0.43 -0.98 16 18 C 0.05 0.12 12.03 -17.36 -0.21 -0.09 16 19 N -0.29 -1.26 12.58 30.63 0.39 -0.88 16 20 C -0.16 0.29 7.12 -25.92 -0.18 0.11 16 21 C -0.11 -0.31 6.87 30.01 0.21 -0.11 16 22 Cl 0.03 0.11 27.20 -51.86 -1.41 -1.30 16 23 S 0.22 0.26 20.17 -107.50 -2.17 -1.91 16 24 H 0.39 -2.94 8.74 45.56 0.40 -2.54 16 25 H 0.09 -0.43 7.96 -51.93 -0.41 -0.84 16 26 H -0.23 0.21 7.11 56.52 0.40 0.61 16 27 H -0.23 0.00 7.11 56.52 0.40 0.40 16 28 H 0.16 -0.50 7.10 -52.48 -0.37 -0.87 16 29 H 0.40 -1.45 7.27 -40.82 -0.30 -1.75 16 30 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.11 -0.46 8.12 -51.93 -0.42 -0.88 16 32 H 0.17 -0.02 6.67 -52.49 -0.35 -0.37 16 33 H 0.15 0.04 8.06 -52.49 -0.42 -0.39 16 34 H 0.18 -0.04 8.06 -52.49 -0.42 -0.46 16 35 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 36 H 0.09 -0.09 6.96 -51.93 -0.36 -0.45 16 LS Contribution 336.41 15.07 5.07 5.07 Total: 0.00 -9.68 336.41 -10.50 -20.18 By element: Atomic # 1 Polarization: -6.09 SS G_CDS: -3.46 Total: -9.54 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: -2.79 Total: -1.77 kcal Atomic # 7 Polarization: -1.41 SS G_CDS: -0.11 Total: -1.52 kcal Atomic # 8 Polarization: -1.52 SS G_CDS: -0.38 Total: -1.89 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: -5.25 Total: -7.31 kcal Atomic # 16 Polarization: 0.26 SS G_CDS: -2.17 Total: -1.91 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.41 Total: -1.30 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -9.68 -10.50 -20.18 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15494482_13431040.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.277 kcal (2) G-P(sol) polarization free energy of solvation -9.680 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.176 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds