Wall clock time and date at job start Tue Mar 9 2021 20:11:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47213 * 2 1 4 4 C 1.50702 * 109.47040 * 120.00007 * 2 1 3 5 5 C 1.36446 * 120.29596 * 119.97826 * 4 2 1 6 6 C 1.40092 * 119.25645 * 179.77463 * 5 4 2 7 7 C 1.40851 * 132.86515 * 179.65246 * 6 5 4 8 8 C 1.46566 * 126.58167 * 0.64855 * 7 6 5 9 9 O 1.21721 * 119.99750 * 359.70599 * 8 7 6 10 10 N 1.34773 * 119.99953 * 179.71162 * 8 7 6 11 11 C 1.46502 * 119.99617 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.85467 * 336.19477 * 11 10 8 13 13 C 1.53785 * 113.69076 * 107.46554 * 11 10 8 14 14 C 1.53781 * 87.08364 * 139.98920 * 13 11 10 15 15 H 1.08999 * 113.68827 * 220.00775 * 14 13 11 16 16 N 1.46501 * 113.61422 * 89.11753 * 14 13 11 17 17 C 1.34437 * 126.82291 * 347.51465 * 16 14 13 18 18 N 1.30832 * 108.07767 * 179.97438 * 17 16 14 19 19 C 1.33245 * 109.82704 * 0.02562 * 18 17 16 20 20 N 1.30714 * 108.94613 * 359.97438 * 19 18 17 21 21 C 1.53778 * 87.07837 * 334.56837 * 14 13 11 22 22 C 1.40560 * 106.83945 * 180.37840 * 7 6 5 23 23 N 1.30737 * 108.74211 * 0.23326 * 22 7 6 24 24 N 1.36577 * 120.22497 * 0.48248 * 6 5 4 25 25 C 1.36237 * 120.08646 * 359.51218 * 24 6 5 26 26 C 1.35191 * 120.70123 * 0.26139 * 25 24 6 27 27 H 0.96705 * 114.00281 * 300.00379 * 1 2 3 28 28 H 1.08998 * 109.47283 * 239.99842 * 2 1 3 29 29 H 1.48495 * 109.99954 * 299.99952 * 3 2 1 30 30 H 1.48500 * 109.99768 * 61.32093 * 3 2 1 31 31 H 1.07999 * 120.37291 * 0.02562 * 5 4 2 32 32 H 0.96994 * 120.00427 * 359.97438 * 10 8 7 33 33 H 1.09004 * 113.61451 * 25.43829 * 13 11 10 34 34 H 1.09005 * 113.61367 * 254.54256 * 13 11 10 35 35 H 1.07998 * 125.95977 * 0.02562 * 17 16 14 36 36 H 1.07997 * 125.51937 * 180.26308 * 19 18 17 37 37 H 1.09001 * 113.61615 * 139.98379 * 21 14 13 38 38 H 1.09003 * 113.61548 * 270.87738 * 21 14 13 39 39 H 1.08004 * 125.62581 * 180.20217 * 22 7 6 40 40 H 1.07997 * 119.65158 * 180.27714 * 25 24 6 41 41 H 1.08004 * 119.83629 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.7157 -1.8206 1.1123 6 6 3.1745 -2.4611 2.2706 7 6 3.9741 -3.6012 2.4823 8 6 4.5751 -4.4505 1.4500 9 8 4.3958 -4.1971 0.2730 10 7 5.3262 -5.5122 1.8039 11 6 5.9264 -6.3614 0.7720 12 1 5.3948 -6.3125 -0.1784 13 6 7.4482 -6.1868 0.6363 14 6 7.5277 -7.7115 0.4526 15 1 8.3748 -8.1705 0.9623 16 7 7.4017 -8.1420 -0.9421 17 6 7.0028 -7.3918 -1.9840 18 7 7.0255 -8.1412 -3.0561 19 6 7.4311 -9.3704 -2.7398 20 7 7.6737 -9.4202 -1.4564 21 6 6.2124 -7.7964 1.2448 22 6 4.0903 -3.7645 3.8735 23 7 3.4176 -2.8128 4.4658 24 7 2.8305 -1.9830 3.5029 25 6 2.0468 -0.8739 3.6106 26 6 1.5964 -0.2370 2.5065 27 1 -0.3934 0.4418 0.7650 28 1 1.7923 -0.5138 -0.8899 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4585 1.2243 31 1 2.9833 -2.1988 0.1368 32 1 5.4693 -5.7140 2.7417 33 1 7.9299 -5.8310 1.5471 34 1 7.7460 -5.6242 -0.2486 35 1 6.7149 -6.3517 -1.9431 36 1 7.5456 -10.1910 -3.4325 37 1 5.5124 -8.5335 0.8512 38 1 6.3561 -7.8809 2.3220 39 1 4.6436 -4.5474 4.3710 40 1 1.7827 -0.4992 4.5885 41 1 0.9763 0.6414 2.6082 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15494484_11618758.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:11:53 Heat of formation + Delta-G solvation = 173.807144 kcal Electronic energy + Delta-G solvation = -28413.718812 eV Core-core repulsion = 24300.802967 eV Total energy + Delta-G solvation = -4112.915845 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.127 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.38809 -43.15854 -41.02544 -39.63874 -39.14075 -37.39991 -34.98026 -34.28186 -32.78787 -32.18846 -31.93575 -30.39241 -27.57322 -27.22044 -26.47178 -25.07082 -23.98150 -23.27638 -23.00349 -22.54743 -21.43949 -20.88465 -19.16462 -18.72896 -18.30006 -17.97132 -17.72479 -17.39543 -17.03295 -16.66406 -16.44096 -16.05915 -16.01705 -15.78884 -15.56245 -15.40653 -15.25190 -14.83658 -14.65914 -14.32835 -13.94725 -13.87675 -13.82643 -13.61672 -13.41792 -13.33033 -12.93970 -12.55790 -12.36770 -12.16130 -11.98567 -11.87012 -11.63046 -10.97720 -10.92691 -10.88630 -10.70441 -10.58744 -10.43417 -10.19272 -8.85404 -5.09692 -0.63482 -0.23427 0.67041 0.90901 0.97835 1.06382 1.22113 1.44172 1.76546 1.98540 2.07074 2.11463 2.46242 2.85248 2.97667 3.08238 3.11496 3.21291 3.34931 3.40207 3.44592 3.55494 3.67263 3.76879 3.84767 3.88426 4.01880 4.12720 4.13394 4.19579 4.27927 4.29978 4.44035 4.48073 4.52932 4.61877 4.64353 4.81033 5.00394 5.07335 5.17461 5.31051 5.37831 5.51573 5.55521 5.85390 6.17482 6.22267 6.45544 7.17641 7.25336 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.076 4.076 3 Si 0.696 3.304 4 C -0.064 4.064 5 C -0.091 4.091 6 C 0.171 3.829 7 C -0.319 4.319 8 C 0.604 3.396 9 O -0.546 6.546 10 N -0.719 5.719 11 C 0.125 3.875 12 H 0.119 0.881 13 C -0.156 4.156 14 C 0.133 3.867 15 H 0.121 0.879 16 N -0.366 5.366 17 C 0.256 3.744 18 N -0.543 5.543 19 C 0.200 3.800 20 N -0.317 5.317 21 C -0.152 4.152 22 C 0.121 3.879 23 N -0.313 5.313 24 N -0.266 5.266 25 C 0.124 3.876 26 C -0.161 4.161 27 H 0.375 0.625 28 H 0.127 0.873 29 H -0.247 1.247 30 H -0.253 1.253 31 H 0.166 0.834 32 H 0.401 0.599 33 H 0.115 0.885 34 H 0.087 0.913 35 H 0.218 0.782 36 H 0.219 0.781 37 H 0.086 0.914 38 H 0.110 0.890 39 H 0.199 0.801 40 H 0.178 0.822 41 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.461 3.601 5.244 6.527 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.185 4.185 3 Si 0.594 3.406 4 C -0.070 4.070 5 C -0.111 4.111 6 C 0.051 3.949 7 C -0.333 4.333 8 C 0.394 3.606 9 O -0.424 6.424 10 N -0.369 5.369 11 C 0.020 3.980 12 H 0.137 0.863 13 C -0.196 4.196 14 C 0.029 3.971 15 H 0.139 0.861 16 N -0.157 5.157 17 C -0.041 4.041 18 N -0.269 5.269 19 C -0.103 4.103 20 N -0.143 5.143 21 C -0.192 4.192 22 C -0.060 4.060 23 N -0.133 5.133 24 N -0.030 5.030 25 C -0.003 4.003 26 C -0.183 4.183 27 H 0.223 0.777 28 H 0.145 0.855 29 H -0.171 1.171 30 H -0.177 1.177 31 H 0.183 0.817 32 H 0.236 0.764 33 H 0.133 0.867 34 H 0.106 0.894 35 H 0.234 0.766 36 H 0.235 0.765 37 H 0.105 0.895 38 H 0.128 0.872 39 H 0.215 0.785 40 H 0.195 0.805 41 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 1.067 4.197 5.202 6.769 hybrid contribution -0.756 -0.530 0.575 1.088 sum 0.311 3.667 5.778 6.850 Atomic orbital electron populations 1.86714 1.16821 1.80003 1.49165 1.25091 0.84351 1.11364 0.97665 0.94426 0.91633 0.73200 0.81322 1.20436 0.96022 0.94942 0.95570 1.20703 0.98035 0.94173 0.98168 1.19298 0.95431 0.94030 0.86187 1.19561 1.16629 1.03639 0.93498 1.16863 0.76972 0.79424 0.87364 1.90792 1.61463 1.71654 1.18517 1.45589 1.52860 1.28879 1.09609 1.22604 0.92524 0.89151 0.93769 0.86286 1.23988 0.97481 0.93094 1.04990 1.21969 1.00344 0.96752 0.78043 0.86068 1.50246 1.49268 1.07991 1.08194 1.26102 0.95660 0.99782 0.82535 1.70625 1.24136 1.03529 1.28634 1.26115 0.96789 0.95743 0.91664 1.78090 1.25126 0.98969 1.12159 1.23825 0.96611 0.97104 1.01631 1.24067 0.94314 0.95717 0.91944 1.77651 1.18434 1.06413 1.10760 1.46079 1.32070 1.19030 1.05854 1.21529 0.91879 0.85065 1.01786 1.20723 1.04263 1.02604 0.90702 0.77697 0.85522 1.17081 1.17683 0.81681 0.76408 0.86689 0.89408 0.76593 0.76474 0.89531 0.87153 0.78469 0.80522 0.82554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.26 12.87 -35.23 -0.45 -0.20 16 2 C -0.08 0.14 2.84 36.01 0.10 0.25 16 3 Si 0.70 -1.91 31.97 -169.99 -5.43 -7.34 16 4 C -0.06 0.09 4.53 -104.55 -0.47 -0.38 16 5 C -0.09 -0.04 9.35 -39.53 -0.37 -0.41 16 6 C 0.17 0.27 6.76 -84.07 -0.57 -0.30 16 7 C -0.32 -0.30 6.17 -104.68 -0.65 -0.94 16 8 C 0.60 0.65 7.78 -12.90 -0.10 0.55 16 9 O -0.55 -2.27 15.30 5.17 0.08 -2.19 16 10 N -0.72 1.77 5.35 -54.35 -0.29 1.48 16 11 C 0.13 -0.31 3.83 -67.12 -0.26 -0.57 16 12 H 0.12 -0.05 6.34 -51.93 -0.33 -0.38 16 13 C -0.16 0.60 7.14 -25.92 -0.19 0.41 16 14 C 0.13 -0.32 5.21 -67.12 -0.35 -0.67 16 15 H 0.12 -0.37 8.14 -51.93 -0.42 -0.79 16 16 N -0.37 -0.35 3.81 -55.32 -0.21 -0.56 16 17 C 0.26 0.32 10.82 -90.65 -0.98 -0.66 16 18 N -0.54 -2.00 11.19 -15.83 -0.18 -2.18 16 19 C 0.20 0.55 13.03 -91.81 -1.20 -0.65 16 20 N -0.32 -1.06 12.70 29.29 0.37 -0.68 16 21 C -0.15 0.52 7.63 -25.92 -0.20 0.32 16 22 C 0.12 -0.09 11.44 -17.14 -0.20 -0.28 16 23 N -0.31 -0.47 12.57 30.75 0.39 -0.09 16 24 N -0.27 -0.27 3.86 -10.55 -0.04 -0.31 16 25 C 0.12 -0.21 11.18 -16.68 -0.19 -0.40 16 26 C -0.16 0.44 8.38 -39.95 -0.33 0.11 16 27 H 0.38 -1.54 8.09 45.56 0.37 -1.17 16 28 H 0.13 -0.29 7.71 -51.93 -0.40 -0.69 16 29 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 30 H -0.25 0.42 7.05 56.52 0.40 0.82 16 31 H 0.17 0.11 7.01 -52.49 -0.37 -0.26 16 32 H 0.40 -2.14 7.65 -40.82 -0.31 -2.45 16 33 H 0.11 -0.62 8.14 -51.93 -0.42 -1.04 16 34 H 0.09 -0.29 7.03 -51.93 -0.36 -0.66 16 35 H 0.22 -0.36 6.75 -52.49 -0.35 -0.72 16 36 H 0.22 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.11 -0.62 8.12 -51.93 -0.42 -1.05 16 39 H 0.20 -1.02 7.46 -52.48 -0.39 -1.41 16 40 H 0.18 -0.77 8.06 -52.49 -0.42 -1.20 16 41 H 0.16 -0.85 7.26 -52.48 -0.38 -1.23 16 LS Contribution 353.83 15.07 5.33 5.33 Total: 0.00 -12.80 353.83 -10.65 -23.45 By element: Atomic # 1 Polarization: -8.80 SS G_CDS: -4.27 Total: -13.07 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: -5.94 Total: -3.63 kcal Atomic # 7 Polarization: -2.38 SS G_CDS: 0.04 Total: -2.34 kcal Atomic # 8 Polarization: -2.01 SS G_CDS: -0.37 Total: -2.39 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: -5.43 Total: -7.34 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -12.80 -10.65 -23.45 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15494484_11618758.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 197.254 kcal (2) G-P(sol) polarization free energy of solvation -12.800 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 184.454 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.647 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.447 kcal (6) G-S(sol) free energy of system = (1) + (5) 173.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds