Wall clock time and date at job start Tue Mar 9 2021 20:13:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36767 * 125.80281 * 2 1 4 4 C 1.47266 * 126.94128 * 359.94523 * 3 2 1 5 5 O 1.21623 * 119.99719 * 359.97438 * 4 3 2 6 6 N 1.34772 * 119.99908 * 179.97438 * 4 3 2 7 7 C 1.46505 * 120.00263 * 180.02562 * 6 4 3 8 8 H 1.08999 * 112.84689 * 23.80158 * 7 6 4 9 9 C 1.53778 * 113.61767 * 155.00091 * 7 6 4 10 10 C 1.53783 * 87.08187 * 89.11539 * 9 7 6 11 11 H 1.09002 * 113.61101 * 270.79819 * 10 9 7 12 12 N 1.46499 * 113.61085 * 139.98075 * 10 9 7 13 13 C 1.34430 * 126.82358 * 274.97657 * 12 10 9 14 14 N 1.30832 * 108.07308 * 179.79414 * 13 12 10 15 15 C 1.33234 * 109.83313 * 0.40801 * 14 13 12 16 16 N 1.30720 * 108.94479 * 359.58957 * 15 14 13 17 17 C 1.53780 * 113.61148 * 252.50017 * 7 6 4 18 18 C 1.46688 * 106.11739 * 180.20290 * 3 2 1 19 19 C 1.34494 * 106.32882 * 359.63270 * 18 3 2 20 20 C 1.50697 * 125.56965 * 180.08690 * 19 18 3 21 21 O 1.42906 * 109.46919 * 65.30771 * 20 19 18 22 22 Si 1.86298 * 109.47276 * 185.30585 * 20 19 18 23 23 N 1.34659 * 125.79877 * 179.97438 * 2 1 3 24 24 H 1.09001 * 109.47143 * 89.99631 * 1 2 3 25 25 H 1.08995 * 109.47239 * 209.99798 * 1 2 3 26 26 H 1.09007 * 109.46767 * 329.99895 * 1 2 3 27 27 H 0.97006 * 120.00407 * 359.97438 * 6 4 3 28 28 H 1.09000 * 113.61179 * 334.56677 * 9 7 6 29 29 H 1.08994 * 113.68932 * 203.67998 * 9 7 6 30 30 H 1.07997 * 125.95719 * 0.08180 * 13 12 10 31 31 H 1.08002 * 125.53021 * 179.85853 * 15 14 13 32 32 H 1.08997 * 113.61236 * 156.33381 * 17 7 6 33 33 H 1.09001 * 113.61688 * 25.42655 * 17 7 6 34 34 H 1.07997 * 126.83566 * 179.74381 * 18 3 2 35 35 H 1.09000 * 109.47167 * 305.30462 * 20 19 18 36 36 H 0.96703 * 113.99551 * 180.02562 * 21 20 19 37 37 H 1.48492 * 110.00295 * 178.68114 * 22 20 19 38 38 H 1.48504 * 110.00058 * 300.00221 * 22 20 19 39 39 H 0.96998 * 124.85288 * 0.03415 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 -0.0011 5 8 0.6840 2.7838 -0.0027 6 7 2.7850 3.5054 -0.0004 7 6 2.3505 4.9045 -0.0010 8 1 1.3470 5.0361 0.4035 9 6 3.3868 5.8717 0.5952 10 6 3.9697 5.9965 -0.8224 11 1 4.7367 5.2550 -1.0459 12 7 4.3773 7.3597 -1.1712 13 6 3.5933 8.3336 -1.6651 14 7 4.3311 9.4002 -1.8379 15 6 5.5874 9.1443 -1.4756 16 7 5.6651 7.9084 -1.0571 17 6 2.5737 5.6182 -1.3447 18 6 3.6883 0.6151 -0.0050 19 6 3.6096 -0.7275 0.0007 20 6 4.7819 -1.6744 0.0004 21 8 5.5104 -1.5308 1.2215 22 14 4.1657 -3.4258 -0.1527 23 7 2.2947 -1.0922 0.0005 24 1 -0.3633 0.0001 -1.0277 25 1 -0.3633 -0.8899 0.5138 26 1 -0.3633 0.8900 0.5139 27 1 3.7312 3.2914 0.0012 28 1 4.0653 5.4004 1.3064 29 1 2.9546 6.7982 0.9729 30 1 2.5376 8.2514 -1.8773 31 1 6.4077 9.8457 -1.5166 32 1 1.9179 6.4752 -1.4981 33 1 2.5957 4.9425 -2.1997 34 1 4.5890 1.2109 -0.0102 35 1 5.4348 -1.4440 -0.8415 36 1 6.2809 -2.1111 1.2903 37 1 5.3136 -4.3671 -0.1862 38 1 3.2743 -3.7523 0.9893 39 1 1.9733 -2.0074 0.0004 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15494484_9865296.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:13:02 Heat of formation + Delta-G solvation = 107.446100 kcal Electronic energy + Delta-G solvation = -24107.110014 eV Core-core repulsion = 20441.420871 eV Total energy + Delta-G solvation = -3665.689143 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.132 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -43.07717 -42.51791 -41.00272 -39.12269 -37.98502 -34.86618 -33.05100 -32.93343 -32.13324 -31.71147 -29.10127 -27.18000 -26.75125 -25.49218 -23.79768 -22.80778 -22.71599 -21.53611 -20.82438 -20.42227 -18.85094 -18.62118 -18.14082 -17.27085 -17.06057 -16.65911 -16.30660 -16.10473 -15.93589 -15.57337 -15.30210 -15.12957 -14.97263 -14.62070 -14.47677 -14.17037 -13.91321 -13.81512 -13.65822 -13.53378 -13.39730 -13.02169 -12.81646 -12.60002 -12.31652 -12.22774 -11.79468 -10.93918 -10.90246 -10.69997 -10.65155 -10.55785 -10.18481 -9.89028 -9.18700 -5.30060 0.69149 0.71690 0.92495 1.17298 1.26705 1.31928 1.62656 1.87932 2.08917 2.23283 2.53457 2.90221 3.15861 3.19630 3.39936 3.46880 3.57340 3.61284 3.79683 3.89335 3.99865 4.12684 4.14978 4.21710 4.29483 4.33586 4.45777 4.56547 4.59554 4.66278 4.66632 4.70438 4.77385 4.97536 5.20756 5.33993 5.48007 5.52476 5.66524 5.82637 5.85603 6.18609 6.31083 6.54417 7.18581 7.34710 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.129 3.871 3 C -0.244 4.244 4 C 0.600 3.400 5 O -0.543 6.543 6 N -0.714 5.714 7 C 0.133 3.867 8 H 0.120 0.880 9 C -0.152 4.152 10 C 0.132 3.868 11 H 0.124 0.876 12 N -0.369 5.369 13 C 0.254 3.746 14 N -0.546 5.546 15 C 0.198 3.802 16 N -0.321 5.321 17 C -0.156 4.156 18 C -0.127 4.127 19 C 0.020 3.980 20 C -0.043 4.043 21 O -0.531 6.531 22 Si 0.666 3.334 23 N -0.544 5.544 24 H 0.083 0.917 25 H 0.067 0.933 26 H 0.104 0.896 27 H 0.402 0.598 28 H 0.089 0.911 29 H 0.104 0.896 30 H 0.217 0.783 31 H 0.217 0.783 32 H 0.104 0.896 33 H 0.092 0.908 34 H 0.146 0.854 35 H 0.089 0.911 36 H 0.383 0.617 37 H -0.249 1.249 38 H -0.251 1.251 39 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.096 -5.549 -2.018 5.905 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.010 3.990 3 C -0.254 4.254 4 C 0.391 3.609 5 O -0.421 6.421 6 N -0.366 5.366 7 C 0.026 3.974 8 H 0.138 0.862 9 C -0.191 4.191 10 C 0.029 3.971 11 H 0.142 0.858 12 N -0.160 5.160 13 C -0.043 4.043 14 N -0.272 5.272 15 C -0.105 4.105 16 N -0.148 5.148 17 C -0.196 4.196 18 C -0.151 4.151 19 C -0.088 4.088 20 C -0.154 4.154 21 O -0.339 6.339 22 Si 0.566 3.434 23 N -0.143 5.143 24 H 0.102 0.898 25 H 0.086 0.914 26 H 0.123 0.877 27 H 0.237 0.763 28 H 0.108 0.892 29 H 0.123 0.877 30 H 0.234 0.766 31 H 0.234 0.766 32 H 0.122 0.878 33 H 0.111 0.889 34 H 0.164 0.836 35 H 0.107 0.893 36 H 0.232 0.768 37 H -0.173 1.173 38 H -0.175 1.175 39 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -0.891 -5.959 -1.378 6.181 hybrid contribution 1.503 -0.563 0.645 1.730 sum 0.612 -6.522 -0.732 6.592 Atomic orbital electron populations 1.20670 0.86398 1.04645 1.04004 1.20394 0.93795 0.85128 0.99671 1.19990 0.93026 0.91800 1.20556 1.17286 0.85106 0.83940 0.74618 1.90763 1.16490 1.84272 1.50596 1.45455 1.09977 1.04581 1.76537 1.21536 1.00109 0.80359 0.95399 0.86248 1.23871 0.98408 1.00750 0.96096 1.23178 0.97049 0.79791 0.97122 0.85781 1.50575 1.06366 1.11687 1.47366 1.26003 0.99670 0.83788 0.94840 1.70596 1.03461 1.27342 1.25844 1.26077 0.95308 0.92788 0.96307 1.78074 0.99318 1.11804 1.25565 1.23967 0.93902 1.01800 0.99929 1.21750 0.95616 0.92538 1.05246 1.19103 0.83276 0.94317 1.12112 1.24003 0.93577 1.08085 0.89717 1.86617 1.44595 1.64884 1.37802 0.95593 0.85128 0.74422 0.88237 1.41678 1.05440 1.08627 1.58550 0.89802 0.91447 0.87735 0.76278 0.89221 0.87727 0.76648 0.76623 0.87779 0.88888 0.83630 0.89303 0.76799 1.17285 1.17499 0.74649 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.08 9.88 36.01 0.36 0.43 16 2 C 0.13 0.07 7.17 -81.88 -0.59 -0.52 16 3 C -0.24 -0.33 6.29 -103.35 -0.65 -0.98 16 4 C 0.60 1.10 7.81 -12.59 -0.10 1.00 16 5 O -0.54 -2.46 14.41 5.26 0.08 -2.38 16 6 N -0.71 0.84 5.26 -54.14 -0.28 0.55 16 7 C 0.13 -0.26 4.32 -67.12 -0.29 -0.55 16 8 H 0.12 -0.09 7.46 -51.93 -0.39 -0.48 16 9 C -0.15 0.38 7.62 -25.92 -0.20 0.18 16 10 C 0.13 -0.25 4.95 -67.12 -0.33 -0.58 16 11 H 0.12 -0.28 8.14 -51.93 -0.42 -0.71 16 12 N -0.37 -0.35 3.83 -55.32 -0.21 -0.56 16 13 C 0.25 0.18 11.87 -90.65 -1.08 -0.90 16 14 N -0.55 -1.84 11.19 -15.83 -0.18 -2.02 16 15 C 0.20 0.54 13.03 -91.81 -1.20 -0.66 16 16 N -0.32 -1.10 12.70 29.29 0.37 -0.73 16 17 C -0.16 0.47 7.24 -25.92 -0.19 0.28 16 18 C -0.13 -0.03 10.45 -37.49 -0.39 -0.42 16 19 C 0.02 0.00 6.13 -81.86 -0.50 -0.51 16 20 C -0.04 0.08 2.97 36.00 0.11 0.19 16 21 O -0.53 0.28 12.86 -35.23 -0.45 -0.17 16 22 Si 0.67 -1.98 30.96 -169.99 -5.26 -7.24 16 23 N -0.54 0.50 5.41 -5.42 -0.03 0.47 16 24 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 25 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 26 H 0.10 0.11 6.47 -51.93 -0.34 -0.22 16 27 H 0.40 -1.18 7.82 -40.82 -0.32 -1.50 16 28 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 29 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.22 -0.73 6.75 -52.49 -0.35 -1.08 16 31 H 0.22 -0.11 8.06 -52.49 -0.42 -0.53 16 32 H 0.10 -0.45 6.39 -51.93 -0.33 -0.78 16 33 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 34 H 0.15 -0.22 7.70 -52.49 -0.40 -0.63 16 35 H 0.09 -0.34 7.96 -51.93 -0.41 -0.75 16 36 H 0.38 -1.73 8.74 45.56 0.40 -1.34 16 37 H -0.25 0.19 7.11 56.52 0.40 0.59 16 38 H -0.25 0.01 7.11 56.52 0.40 0.41 16 39 H 0.41 -1.35 6.72 -40.82 -0.27 -1.63 16 LS Contribution 333.48 15.07 5.03 5.03 Total: 0.00 -11.27 333.48 -10.57 -21.84 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -4.58 Total: -11.75 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -5.05 Total: -3.03 kcal Atomic # 7 Polarization: -1.96 SS G_CDS: -0.33 Total: -2.29 kcal Atomic # 8 Polarization: -2.18 SS G_CDS: -0.38 Total: -2.55 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.26 Total: -7.24 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -11.27 -10.57 -21.84 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15494484_9865296.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.289 kcal (2) G-P(sol) polarization free energy of solvation -11.273 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 118.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.570 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.843 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds