Wall clock time and date at job start Tue Mar 9 2021 20:14:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.43190 * 179.97438 * 2 1 4 4 C 1.39639 * 120.15015 * 48.85239 * 3 2 1 5 5 C 1.37949 * 119.84403 * 180.02562 * 4 3 2 6 6 C 1.38365 * 120.15554 * 359.97438 * 5 4 3 7 7 C 1.50698 * 119.85153 * 179.97438 * 6 5 4 8 8 H 1.08999 * 112.84903 * 348.80535 * 7 6 5 9 9 C 1.53778 * 113.61154 * 119.99603 * 7 6 5 10 10 C 1.53787 * 87.08035 * 139.98353 * 9 7 6 11 11 H 1.08994 * 113.61447 * 220.02014 * 10 9 7 12 12 N 1.46496 * 113.61210 * 89.11438 * 10 9 7 13 13 C 1.34774 * 120.00099 * 155.00440 * 12 10 9 14 14 O 1.21582 * 119.99755 * 359.97438 * 13 12 10 15 15 C 1.47652 * 120.00525 * 180.02562 * 13 12 10 16 16 C 1.40166 * 119.97185 * 359.97438 * 15 13 12 17 17 C 1.36361 * 120.67116 * 179.97438 * 16 15 13 18 18 C 1.39324 * 120.23483 * 0.02562 * 17 16 15 19 19 N 1.37399 * 133.25496 * 179.97438 * 18 17 16 20 20 C 1.36861 * 109.98608 * 180.02562 * 19 18 17 21 21 C 1.34191 * 109.96508 * 0.02562 * 20 19 18 22 22 C 1.50693 * 126.54222 * 180.02562 * 21 20 19 23 23 O 1.42902 * 109.47183 * 254.97018 * 22 21 20 24 24 Si 1.86301 * 109.47464 * 14.97167 * 22 21 20 25 25 C 1.40909 * 119.64059 * 0.02562 * 18 17 16 26 26 C 1.39181 * 119.97718 * 179.72608 * 15 13 12 27 27 C 1.53778 * 113.61544 * 217.49644 * 7 6 5 28 28 C 1.38363 * 120.30027 * 0.27269 * 6 5 4 29 29 C 1.37945 * 120.15409 * 359.48960 * 28 6 5 30 30 H 1.07990 * 120.08087 * 0.02562 * 4 3 2 31 31 H 1.08004 * 119.92457 * 179.97438 * 5 4 3 32 32 H 1.08998 * 113.61879 * 25.43835 * 9 7 6 33 33 H 1.08999 * 113.61887 * 254.52942 * 9 7 6 34 34 H 0.97002 * 120.00490 * 335.00104 * 12 10 9 35 35 H 1.08005 * 119.66568 * 0.02562 * 16 15 13 36 36 H 1.07998 * 119.87977 * 180.02562 * 17 16 15 37 37 H 0.97003 * 125.01079 * 0.02562 * 19 18 17 38 38 H 1.07997 * 125.01748 * 180.02562 * 20 19 18 39 39 H 1.09004 * 109.47450 * 134.96960 * 22 21 20 40 40 H 0.96699 * 114.00150 * 180.02562 * 23 22 21 41 41 H 1.48500 * 110.00337 * 178.68282 * 24 22 21 42 42 H 1.48504 * 109.99582 * 300.00358 * 24 22 21 43 43 H 1.08007 * 120.30647 * 359.97438 * 26 15 13 44 44 H 1.08993 * 113.61229 * 105.47308 * 27 7 6 45 45 H 1.09000 * 113.61263 * 334.56958 * 27 7 6 46 46 H 1.07998 * 119.92151 * 179.72828 * 28 6 5 47 47 H 1.07996 * 120.08082 * 180.25926 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2696 -0.7936 -0.9092 5 6 4.6491 -0.7885 -0.9033 6 6 5.3374 0.0015 0.0003 7 6 6.8444 0.0013 0.0012 8 1 7.2679 -0.7942 -0.6119 9 6 7.4607 1.3835 -0.2716 10 6 8.5064 1.0422 0.8030 11 1 8.7582 1.8827 1.4498 12 7 9.6876 0.3551 0.2750 13 6 10.8627 0.4349 0.9302 14 8 10.9425 1.0776 1.9592 15 6 12.0534 -0.2571 0.3978 16 6 11.9609 -0.9974 -0.7888 17 6 13.0516 -1.6417 -1.2935 18 6 14.2760 -1.5717 -0.6323 19 7 15.5172 -2.1014 -0.8908 20 6 16.3984 -1.7271 0.0872 21 6 15.7762 -0.9594 0.9952 22 6 16.3936 -0.3450 2.2249 23 8 15.9718 -1.0693 3.3823 24 14 18.2503 -0.4170 2.0898 25 6 14.3817 -0.8316 0.5621 26 6 13.2680 -0.1696 1.0719 27 6 7.4597 0.0916 1.4076 28 6 4.6484 0.7869 0.9074 29 6 3.2690 0.7953 0.9094 30 1 2.7337 -1.4103 -1.6154 31 1 5.1932 -1.4026 -1.6058 32 1 6.8092 2.2137 0.0013 33 1 7.8802 1.4848 -1.2725 34 1 9.6241 -0.1573 -0.5461 35 1 11.0164 -1.0574 -1.3092 36 1 12.9660 -2.2081 -2.2090 37 1 15.7366 -2.6585 -1.6539 38 1 17.4405 -2.0080 0.1230 39 1 16.0757 0.6941 2.3107 40 1 16.3315 -0.7281 4.2125 41 1 18.8713 0.2144 3.2818 42 1 18.6966 -1.8285 1.9722 43 1 13.3450 0.4033 1.9842 44 1 7.8784 -0.8502 1.7622 45 1 6.8078 0.5685 2.1395 46 1 5.1919 1.3978 1.6130 47 1 2.7324 1.4120 1.6151 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15505404_13287722.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:14:56 Heat of formation + Delta-G solvation = 82.204406 kcal Electronic energy + Delta-G solvation = -31129.613631 eV Core-core repulsion = 26824.324905 eV Total energy + Delta-G solvation = -4305.288726 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.142 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.48085 -41.67261 -40.49856 -39.16282 -37.89932 -37.44952 -37.23204 -34.59395 -33.37708 -32.38325 -32.10772 -30.81795 -30.41053 -26.98500 -26.83466 -26.45146 -24.91880 -23.91367 -23.48834 -23.22980 -21.68027 -20.59938 -20.36032 -19.93024 -19.10618 -18.49852 -18.41571 -17.50035 -17.33938 -16.72413 -16.69736 -15.98991 -15.93479 -15.75959 -15.70673 -15.36735 -15.07593 -15.02222 -14.95614 -14.79267 -14.68976 -14.61803 -14.40518 -14.12324 -14.03193 -13.81689 -13.66749 -13.60852 -13.42352 -13.19626 -13.01065 -12.75200 -12.54785 -12.38346 -12.13257 -11.99734 -11.79924 -11.78562 -11.32968 -10.86020 -10.77256 -10.36591 -10.14171 -10.06173 -9.75981 -9.32117 -8.82704 -4.98658 -0.31593 -0.05484 0.18739 0.24289 1.27416 1.46033 1.56506 1.73141 1.91088 1.91898 1.97856 1.98739 2.10576 2.80013 2.89000 2.94499 3.32518 3.48134 3.51494 3.56628 3.60925 3.69490 3.73099 3.79221 3.81198 3.86335 3.92581 4.04668 4.10641 4.20869 4.25934 4.34862 4.37495 4.48853 4.53834 4.58112 4.60749 4.66472 4.74568 4.78510 4.80984 4.90342 4.94534 5.01081 5.03109 5.13424 5.22182 5.25658 5.36013 5.43219 5.50215 5.60005 5.60398 5.70623 5.97826 6.36789 6.52246 6.53833 6.53915 7.29993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.414 5.414 2 C 0.251 3.749 3 C -0.034 4.034 4 C -0.067 4.067 5 C -0.117 4.117 6 C -0.040 4.040 7 C -0.080 4.080 8 H 0.101 0.899 9 C -0.135 4.135 10 C 0.120 3.880 11 H 0.107 0.893 12 N -0.712 5.712 13 C 0.569 3.431 14 O -0.536 6.536 15 C -0.170 4.170 16 C -0.067 4.067 17 C -0.133 4.133 18 C 0.120 3.880 19 N -0.584 5.584 20 C 0.064 3.936 21 C -0.145 4.145 22 C -0.042 4.042 23 O -0.536 6.536 24 Si 0.682 3.318 25 C -0.102 4.102 26 C 0.009 3.991 27 C -0.145 4.145 28 C -0.118 4.118 29 C -0.066 4.066 30 H 0.133 0.867 31 H 0.133 0.867 32 H 0.100 0.900 33 H 0.079 0.921 34 H 0.400 0.600 35 H 0.128 0.872 36 H 0.128 0.872 37 H 0.422 0.578 38 H 0.177 0.823 39 H 0.074 0.926 40 H 0.378 0.622 41 H -0.259 1.259 42 H -0.255 1.255 43 H 0.137 0.863 44 H 0.077 0.923 45 H 0.097 0.903 46 H 0.136 0.864 47 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.194 -0.647 -5.625 9.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.089 5.089 2 C -0.065 4.065 3 C -0.037 4.037 4 C -0.087 4.087 5 C -0.135 4.135 6 C -0.041 4.041 7 C -0.098 4.098 8 H 0.119 0.881 9 C -0.173 4.173 10 C 0.015 3.985 11 H 0.125 0.875 12 N -0.364 5.364 13 C 0.358 3.642 14 O -0.413 6.413 15 C -0.175 4.175 16 C -0.087 4.087 17 C -0.153 4.153 18 C 0.011 3.989 19 N -0.187 5.187 20 C -0.062 4.062 21 C -0.152 4.152 22 C -0.153 4.153 23 O -0.343 6.343 24 Si 0.583 3.417 25 C -0.107 4.107 26 C -0.010 4.010 27 C -0.183 4.183 28 C -0.136 4.136 29 C -0.086 4.086 30 H 0.151 0.849 31 H 0.151 0.849 32 H 0.119 0.881 33 H 0.097 0.903 34 H 0.236 0.764 35 H 0.145 0.855 36 H 0.146 0.854 37 H 0.260 0.740 38 H 0.194 0.806 39 H 0.092 0.908 40 H 0.226 0.774 41 H -0.184 1.184 42 H -0.179 1.179 43 H 0.155 0.845 44 H 0.096 0.904 45 H 0.116 0.884 46 H 0.153 0.847 47 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 5.977 -0.891 -5.065 7.885 hybrid contribution -0.038 -0.788 0.307 0.846 sum 5.939 -1.679 -4.758 7.793 Atomic orbital electron populations 1.81308 1.12097 1.07857 1.07653 1.25756 0.92721 0.94004 0.94016 1.16017 0.84311 1.02545 1.00813 1.21208 0.94325 0.96573 0.96624 1.21015 0.93433 0.99670 0.99348 1.19973 0.95225 0.94638 0.94244 1.21712 0.90425 0.98822 0.98866 0.88055 1.23437 0.97206 0.96828 0.99806 1.21831 0.84157 0.96045 0.96478 0.87452 1.45549 1.08878 1.53689 1.28299 1.18171 0.82649 0.79928 0.83498 1.90796 1.85001 1.41797 1.23714 1.19499 0.94037 1.05327 0.98588 1.20562 0.97964 0.95657 0.94518 1.19661 0.89872 1.04388 1.01401 1.18425 0.86817 0.97325 0.96364 1.41711 1.07271 1.45433 1.24245 1.21682 0.95893 0.98739 0.89932 1.19522 0.92454 1.05853 0.97355 1.24073 1.10016 0.96665 0.84502 1.86634 1.72997 1.58526 1.16121 0.95269 0.74237 0.83014 0.89170 1.18919 0.93727 1.02120 0.95892 1.20660 0.89176 0.93633 0.97562 1.23594 0.97701 1.01199 0.95834 1.20986 0.93367 0.99886 0.99377 1.21203 0.94271 0.96558 0.96597 0.84911 0.84907 0.88113 0.90251 0.76435 0.85453 0.85396 0.74033 0.80645 0.90760 0.77449 1.18391 1.17922 0.84495 0.90438 0.88434 0.84674 0.84848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.14 18.54 41.84 0.78 -1.36 16 2 C 0.25 0.56 15.33 -22.48 -0.34 0.22 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.12 9.76 -39.16 -0.38 -0.26 16 5 C -0.12 0.32 9.69 -39.64 -0.38 -0.06 16 6 C -0.04 0.11 5.30 -104.53 -0.55 -0.44 16 7 C -0.08 0.30 3.85 -90.96 -0.35 -0.05 16 8 H 0.10 -0.48 8.09 -51.93 -0.42 -0.90 16 9 C -0.13 0.49 7.29 -25.92 -0.19 0.30 16 10 C 0.12 -0.20 4.32 -67.12 -0.29 -0.49 16 11 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 12 N -0.71 0.85 5.21 -54.02 -0.28 0.57 16 13 C 0.57 1.35 7.76 -12.42 -0.10 1.26 16 14 O -0.54 -3.34 15.93 5.29 0.08 -3.26 16 15 C -0.17 -0.27 5.87 -104.98 -0.62 -0.89 16 16 C -0.07 0.07 9.46 -39.53 -0.37 -0.30 16 17 C -0.13 0.14 10.00 -39.85 -0.40 -0.25 16 18 C 0.12 0.06 7.27 -83.96 -0.61 -0.55 16 19 N -0.58 0.99 6.05 -10.61 -0.06 0.92 16 20 C 0.06 -0.06 10.43 -16.73 -0.17 -0.24 16 21 C -0.14 -0.18 5.61 -102.69 -0.58 -0.76 16 22 C -0.04 -0.01 3.05 36.00 0.11 0.10 16 23 O -0.54 -1.01 12.86 -35.23 -0.45 -1.46 16 24 Si 0.68 -1.11 30.80 -169.99 -5.23 -6.34 16 25 C -0.10 -0.24 6.34 -105.15 -0.67 -0.91 16 26 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 27 C -0.14 0.35 7.25 -25.92 -0.19 0.16 16 28 C -0.12 0.31 8.60 -39.64 -0.34 -0.03 16 29 C -0.07 0.11 9.76 -39.17 -0.38 -0.27 16 30 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 31 H 0.13 -0.61 8.05 -52.48 -0.42 -1.03 16 32 H 0.10 -0.39 7.73 -51.93 -0.40 -0.79 16 33 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 34 H 0.40 -1.55 6.70 -40.82 -0.27 -1.83 16 35 H 0.13 -0.55 6.36 -52.48 -0.33 -0.88 16 36 H 0.13 -0.46 8.06 -52.49 -0.42 -0.89 16 37 H 0.42 -2.06 8.96 -40.82 -0.37 -2.43 16 38 H 0.18 -0.63 6.30 -52.49 -0.33 -0.96 16 39 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 40 H 0.38 -0.80 8.74 45.56 0.40 -0.40 16 41 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 42 H -0.25 -0.18 7.04 56.52 0.40 0.22 16 43 H 0.14 0.51 7.64 -52.48 -0.40 0.11 16 44 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 45 H 0.10 -0.29 6.28 -51.93 -0.33 -0.61 16 46 H 0.14 -0.55 6.62 -52.49 -0.35 -0.90 16 47 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 LS Contribution 403.22 15.07 6.08 6.08 Total: 0.00 -11.83 403.22 -12.23 -24.06 By element: Atomic # 1 Polarization: -9.44 SS G_CDS: -5.34 Total: -14.78 kcal Atomic # 6 Polarization: 3.38 SS G_CDS: -7.80 Total: -4.42 kcal Atomic # 7 Polarization: -0.31 SS G_CDS: 0.43 Total: 0.12 kcal Atomic # 8 Polarization: -4.35 SS G_CDS: -0.37 Total: -4.72 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.23 Total: -6.34 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -11.83 -12.23 -24.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15505404_13287722.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.265 kcal (2) G-P(sol) polarization free energy of solvation -11.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.060 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds