Wall clock time and date at job start Tue Mar 9 2021 20:15:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38976 * 119.95591 * 2 1 4 4 O 1.35715 * 119.91505 * 0.02562 * 3 2 1 5 5 C 1.39020 * 120.17626 * 180.27647 * 3 2 1 6 6 C 1.50703 * 119.95577 * 179.72409 * 5 3 2 7 7 O 1.42896 * 109.47055 * 284.72913 * 6 5 3 8 8 Si 1.86304 * 109.46911 * 164.72805 * 6 5 3 9 9 C 1.37676 * 120.08741 * 359.45290 * 5 3 2 10 10 C 1.39754 * 119.91290 * 0.27196 * 9 5 3 11 11 C 1.47604 * 120.08942 * 179.97438 * 10 9 5 12 12 O 1.21589 * 119.99964 * 0.02562 * 11 10 9 13 13 N 1.34773 * 119.99627 * 179.97438 * 11 10 9 14 14 C 1.46505 * 119.99327 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.85207 * 23.80608 * 14 13 11 16 16 C 1.53787 * 113.61239 * 155.00333 * 14 13 11 17 17 C 1.53781 * 87.08243 * 89.11080 * 16 14 13 18 18 H 1.08993 * 113.61990 * 270.79859 * 17 16 14 19 19 C 1.50701 * 113.60897 * 139.97664 * 17 16 14 20 20 C 1.38356 * 119.85164 * 299.72652 * 19 17 16 21 21 C 1.37952 * 120.15097 * 179.76431 * 20 19 17 22 22 C 1.39632 * 119.84635 * 0.53499 * 21 20 19 23 23 C 1.43197 * 120.15318 * 179.70030 * 22 21 20 24 24 N 9.69811 * 127.00636 * 198.49819 * 13 1 2 25 25 C 1.39639 * 119.69589 * 359.72151 * 22 21 20 26 26 C 1.37942 * 119.84936 * 0.02562 * 25 22 21 27 27 C 1.53784 * 113.61469 * 252.49638 * 14 13 11 28 28 C 1.37725 * 119.95832 * 179.72923 * 2 1 3 29 29 H 1.09005 * 109.47259 * 270.27369 * 1 2 3 30 30 H 1.08998 * 109.47313 * 30.26670 * 1 2 3 31 31 H 1.08997 * 109.47176 * 150.27354 * 1 2 3 32 32 H 0.96698 * 114.00028 * 270.27677 * 4 3 2 33 33 H 1.09002 * 109.47152 * 44.72721 * 6 5 3 34 34 H 0.96699 * 114.00604 * 59.99815 * 7 6 5 35 35 H 1.48499 * 109.99644 * 178.68271 * 8 6 5 36 36 H 1.48492 * 110.00078 * 299.99778 * 8 6 5 37 37 H 1.08001 * 120.04387 * 180.29417 * 9 5 3 38 38 H 0.96996 * 120.00595 * 359.97438 * 13 11 10 39 39 H 1.09005 * 113.61086 * 203.66426 * 16 14 13 40 40 H 1.09003 * 113.61277 * 334.47782 * 16 14 13 41 41 H 1.08003 * 119.92697 * 0.02562 * 20 19 17 42 42 H 1.08003 * 120.07648 * 180.25569 * 21 20 19 43 43 H 1.07998 * 120.07353 * 180.02562 * 25 22 21 44 44 H 1.07990 * 119.92606 * 180.02562 * 26 25 22 45 45 H 1.09005 * 113.61264 * 25.43428 * 27 14 13 46 46 H 1.08998 * 113.61728 * 156.33781 * 27 14 13 47 47 H 1.08002 * 120.03891 * 359.97438 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3779 0.0005 5 6 3.5911 1.2095 -0.0058 6 6 4.3385 2.5180 -0.0121 7 8 4.2719 3.0984 -1.3162 8 14 6.1198 2.2179 0.4439 9 6 4.2859 0.0209 -0.0002 10 6 3.5918 -1.1921 0.0056 11 6 4.3328 -2.4687 0.0110 12 8 5.5487 -2.4658 0.0110 13 7 3.6616 -3.6373 0.0171 14 6 4.3971 -4.9043 0.0231 15 1 5.4046 -4.8070 0.4276 16 6 3.6021 -6.0753 0.6247 17 6 3.0623 -6.3338 -0.7918 18 1 2.1495 -5.7831 -1.0186 19 6 2.9664 -7.7961 -1.1436 20 6 4.1057 -8.5810 -1.1420 21 6 4.0242 -9.9213 -1.4583 22 6 2.7900 -10.4829 -1.7914 23 6 2.6988 -11.8719 -2.1271 24 7 2.6268 -12.9732 -2.3961 25 6 1.6450 -9.6836 -1.7962 26 6 1.7400 -8.3460 -1.4728 27 6 4.3393 -5.6566 -1.3170 28 6 2.1947 -1.1932 0.0056 29 1 -0.3634 0.0049 1.0277 30 1 -0.3634 0.8876 -0.5180 31 1 -0.3633 -0.8924 -0.5096 32 1 1.3182 2.7161 -0.8827 33 1 3.8878 3.1974 0.7114 34 1 3.3723 3.2822 -1.6195 35 1 6.8749 3.4961 0.4104 36 1 6.2027 1.6145 1.7982 37 1 5.3659 0.0259 0.0001 38 1 2.6916 -3.6396 0.0183 39 1 4.2311 -6.8798 1.0060 40 1 2.8363 -5.7638 1.3351 41 1 5.0605 -8.1444 -0.8885 42 1 4.9137 -10.5338 -1.4527 43 1 0.6872 -10.1117 -2.0525 44 1 0.8553 -7.7268 -1.4757 45 1 4.1676 -5.0069 -2.1753 46 1 5.1697 -6.3466 -1.4666 47 1 1.6546 -2.1285 0.0105 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15505404_13287732.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:15:05 Heat of formation + Delta-G solvation = -3.045403 kcal Electronic energy + Delta-G solvation = -30885.171471 eV Core-core repulsion = 26579.382035 eV Total energy + Delta-G solvation = -4305.789435 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.146 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.02223 -41.45904 -40.42223 -39.17953 -37.79971 -37.69226 -37.29491 -34.83587 -34.09244 -32.58218 -32.23453 -31.50153 -28.21477 -27.22468 -26.91980 -26.77205 -25.01718 -23.95947 -23.32178 -22.29668 -21.66743 -20.47947 -19.98404 -19.65996 -18.97423 -18.13029 -17.81726 -17.39828 -16.91733 -16.73114 -16.56973 -16.17111 -16.02543 -15.76690 -15.53321 -15.20756 -15.10884 -14.89758 -14.75162 -14.66307 -14.52273 -14.41786 -14.11695 -14.04275 -13.93741 -13.71593 -13.69237 -13.51966 -13.27449 -13.15969 -13.09049 -12.84849 -12.44543 -12.32359 -12.06215 -11.97661 -11.87803 -11.42824 -11.33553 -11.24919 -11.00399 -10.25765 -10.16377 -10.05635 -9.82362 -9.78122 -4.83992 -0.51029 -0.35896 -0.01736 0.19882 1.35264 1.54144 1.70074 1.70361 1.87508 1.89980 1.99452 2.47948 2.75985 2.85310 2.87102 3.23242 3.30900 3.41115 3.44969 3.48371 3.55206 3.66859 3.72004 3.75013 3.77845 3.84214 3.98024 4.04298 4.16054 4.16433 4.29254 4.30204 4.40952 4.45720 4.50066 4.52692 4.53676 4.61268 4.68057 4.70894 4.83175 4.86469 4.87321 4.92289 4.97550 5.01847 5.08069 5.13226 5.18036 5.33411 5.40215 5.47610 5.66017 6.26883 6.31535 6.42857 6.50769 7.07155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.113 4.113 3 C 0.142 3.858 4 O -0.490 6.490 5 C -0.142 4.142 6 C -0.076 4.076 7 O -0.530 6.530 8 Si 0.740 3.260 9 C -0.039 4.039 10 C -0.135 4.135 11 C 0.564 3.436 12 O -0.525 6.525 13 N -0.710 5.710 14 C 0.119 3.881 15 H 0.110 0.890 16 C -0.135 4.135 17 C -0.080 4.080 18 H 0.101 0.899 19 C -0.041 4.041 20 C -0.118 4.118 21 C -0.066 4.066 22 C -0.033 4.033 23 C 0.250 3.750 24 N -0.413 5.413 25 C -0.067 4.067 26 C -0.117 4.117 27 C -0.144 4.144 28 C -0.068 4.068 29 H 0.076 0.924 30 H 0.071 0.929 31 H 0.070 0.930 32 H 0.393 0.607 33 H 0.081 0.919 34 H 0.359 0.641 35 H -0.251 1.251 36 H -0.248 1.248 37 H 0.147 0.853 38 H 0.400 0.600 39 H 0.102 0.898 40 H 0.079 0.921 41 H 0.136 0.864 42 H 0.134 0.866 43 H 0.133 0.867 44 H 0.133 0.867 45 H 0.078 0.922 46 H 0.099 0.901 47 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.464 2.814 -0.396 5.292 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.113 4.113 3 C 0.097 3.903 4 O -0.301 6.301 5 C -0.143 4.143 6 C -0.184 4.184 7 O -0.334 6.334 8 Si 0.637 3.363 9 C -0.057 4.057 10 C -0.138 4.138 11 C 0.352 3.648 12 O -0.402 6.402 13 N -0.362 5.362 14 C 0.014 3.986 15 H 0.128 0.872 16 C -0.173 4.173 17 C -0.098 4.098 18 H 0.119 0.881 19 C -0.042 4.042 20 C -0.136 4.136 21 C -0.086 4.086 22 C -0.036 4.036 23 C -0.066 4.066 24 N -0.088 5.088 25 C -0.087 4.087 26 C -0.135 4.135 27 C -0.182 4.182 28 C -0.087 4.087 29 H 0.095 0.905 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.251 0.749 33 H 0.099 0.901 34 H 0.206 0.794 35 H -0.176 1.176 36 H -0.173 1.173 37 H 0.165 0.835 38 H 0.236 0.764 39 H 0.120 0.880 40 H 0.097 0.903 41 H 0.153 0.847 42 H 0.152 0.848 43 H 0.151 0.849 44 H 0.151 0.849 45 H 0.096 0.904 46 H 0.117 0.883 47 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -2.375 1.176 0.401 2.680 hybrid contribution -2.342 1.013 -0.107 2.554 sum -4.717 2.190 0.294 5.209 Atomic orbital electron populations 1.20701 0.89614 1.03223 1.03162 1.20175 0.97290 0.92040 1.01829 1.18354 0.88783 0.85281 0.97896 1.84785 1.75880 1.35858 1.33611 1.20599 0.93471 0.96427 1.03776 1.25416 1.13332 0.91318 0.88326 1.86843 1.31855 1.83222 1.31494 0.92730 0.75035 0.84906 0.83581 1.20941 1.00220 0.89981 0.94598 1.19835 0.93462 0.93446 1.07067 1.18103 0.87261 0.83446 0.75997 1.90826 1.13173 1.87379 1.48813 1.45560 1.10071 1.04952 1.75578 1.21886 0.97463 0.82205 0.97090 0.87238 1.23446 1.00177 0.97921 0.95767 1.21712 0.99364 0.91672 0.97068 0.88083 1.19954 0.93151 0.95214 0.95870 1.20983 0.98879 0.92998 1.00744 1.21211 0.96165 0.95308 0.95932 1.16021 0.95382 0.85600 1.06584 1.25751 0.94099 0.92796 0.93916 1.81309 1.06982 1.11886 1.08636 1.21212 0.97375 0.93521 0.96620 1.21008 0.97695 0.94629 1.00121 1.23592 0.97398 0.99206 0.98006 1.21084 0.92565 0.97804 0.97230 0.90518 0.91004 0.91077 0.74900 0.90115 0.79433 1.17588 1.17265 0.83547 0.76388 0.87994 0.90257 0.84662 0.84812 0.84890 0.84924 0.90358 0.88284 0.84935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.38 9.78 36.00 0.35 0.73 16 2 C -0.11 0.19 5.89 -104.54 -0.62 -0.42 16 3 C 0.14 -0.10 6.62 -39.02 -0.26 -0.36 16 4 O -0.49 0.96 11.54 -18.85 -0.22 0.74 16 5 C -0.14 -0.04 5.27 -104.54 -0.55 -0.59 16 6 C -0.08 -0.03 2.33 36.01 0.08 0.05 16 7 O -0.53 -0.08 12.65 -35.23 -0.45 -0.53 16 8 Si 0.74 0.62 30.17 -169.99 -5.13 -4.51 16 9 C -0.04 -0.03 8.20 -39.22 -0.32 -0.35 16 10 C -0.13 0.02 5.87 -104.96 -0.62 -0.60 16 11 C 0.56 0.36 7.76 -12.44 -0.10 0.27 16 12 O -0.53 -2.20 15.94 5.29 0.08 -2.12 16 13 N -0.71 1.85 5.21 -54.03 -0.28 1.56 16 14 C 0.12 -0.34 4.33 -67.11 -0.29 -0.63 16 15 H 0.11 -0.12 7.46 -51.93 -0.39 -0.51 16 16 C -0.14 0.62 7.29 -25.92 -0.19 0.43 16 17 C -0.08 0.37 3.85 -90.96 -0.35 0.02 16 18 H 0.10 -0.58 8.09 -51.93 -0.42 -1.00 16 19 C -0.04 0.14 5.30 -104.53 -0.55 -0.41 16 20 C -0.12 0.39 8.60 -39.64 -0.34 0.05 16 21 C -0.07 0.15 9.76 -39.17 -0.38 -0.23 16 22 C -0.03 0.03 5.73 -106.93 -0.61 -0.58 16 23 C 0.25 0.45 15.33 -22.48 -0.34 0.11 16 24 N -0.41 -1.98 18.54 41.83 0.78 -1.21 16 25 C -0.07 0.15 9.76 -39.17 -0.38 -0.23 16 26 C -0.12 0.39 9.69 -39.64 -0.38 0.01 16 27 C -0.14 0.52 7.25 -25.91 -0.19 0.33 16 28 C -0.07 0.15 9.18 -39.22 -0.36 -0.21 16 29 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 30 H 0.07 -0.27 7.53 -51.93 -0.39 -0.66 16 31 H 0.07 -0.34 8.08 -51.93 -0.42 -0.76 16 32 H 0.39 -2.57 8.58 45.56 0.39 -2.18 16 33 H 0.08 0.04 7.81 -51.93 -0.41 -0.36 16 34 H 0.36 -1.27 8.24 45.56 0.38 -0.90 16 35 H -0.25 -0.83 7.11 56.52 0.40 -0.42 16 36 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 37 H 0.15 0.09 4.70 -52.49 -0.25 -0.15 16 38 H 0.40 -2.08 6.72 -40.82 -0.27 -2.36 16 39 H 0.10 -0.48 7.73 -51.93 -0.40 -0.88 16 40 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 41 H 0.14 -0.66 6.63 -52.48 -0.35 -1.01 16 42 H 0.13 -0.45 8.06 -52.48 -0.42 -0.87 16 43 H 0.13 -0.45 8.06 -52.49 -0.42 -0.88 16 44 H 0.13 -0.69 8.05 -52.49 -0.42 -1.11 16 45 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 46 H 0.10 -0.40 6.28 -51.93 -0.33 -0.73 16 47 H 0.13 -0.71 6.39 -52.49 -0.34 -1.04 16 LS Contribution 398.87 15.07 6.01 6.01 Total: 0.00 -10.29 398.87 -10.53 -20.81 By element: Atomic # 1 Polarization: -13.23 SS G_CDS: -4.92 Total: -18.15 kcal Atomic # 6 Polarization: 3.79 SS G_CDS: -6.40 Total: -2.61 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: 0.49 Total: 0.36 kcal Atomic # 8 Polarization: -1.33 SS G_CDS: -0.58 Total: -1.91 kcal Atomic # 14 Polarization: 0.62 SS G_CDS: -5.13 Total: -4.51 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -10.29 -10.53 -20.81 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15505404_13287732.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.767 kcal (2) G-P(sol) polarization free energy of solvation -10.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.481 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.527 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.812 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.045 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds