Wall clock time and date at job start Tue Mar 9 2021 20:15:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 C 1.39635 * 120.15217 * 26.92926 * 3 2 1 5 5 C 1.37948 * 119.84189 * 179.97438 * 4 3 2 6 6 C 1.38359 * 120.15315 * 359.97438 * 5 4 3 7 7 C 1.50702 * 119.84367 * 179.97438 * 6 5 4 8 8 H 1.08994 * 112.85275 * 11.19227 * 7 6 5 9 9 C 1.53782 * 113.61613 * 142.50414 * 7 6 5 10 10 C 1.53780 * 87.08503 * 139.97843 * 9 7 6 11 11 H 1.08992 * 113.69072 * 220.01197 * 10 9 7 12 12 N 1.46500 * 113.61664 * 89.11277 * 10 9 7 13 13 C 1.34777 * 119.99596 * 107.50170 * 12 10 9 14 14 O 1.21625 * 120.00205 * 0.02562 * 13 12 10 15 15 C 1.47266 * 119.99674 * 180.02562 * 13 12 10 16 16 C 1.36332 * 126.96624 * 180.02562 * 15 13 12 17 17 C 1.50996 * 126.79242 * 0.05664 * 16 15 13 18 18 C 1.53402 * 108.24926 * 164.25624 * 17 16 15 19 19 C 1.53160 * 109.03714 * 48.48591 * 18 17 16 20 20 C 1.53114 * 109.55039 * 290.44554 * 19 18 17 21 21 N 1.35214 * 108.66311 * 180.02562 * 16 15 13 22 22 C 1.36427 * 109.89391 * 359.97438 * 21 16 15 23 23 C 1.50706 * 125.48980 * 180.02562 * 22 21 16 24 24 O 1.42895 * 109.46938 * 329.99641 * 23 22 21 25 25 Si 1.86299 * 109.46748 * 209.99806 * 23 22 21 26 26 C 1.34485 * 109.01517 * 0.28134 * 22 21 16 27 27 C 1.53782 * 113.61148 * 240.00066 * 7 6 5 28 28 C 1.38361 * 120.30951 * 0.25331 * 6 5 4 29 29 C 1.37945 * 120.14617 * 359.49121 * 28 6 5 30 30 H 1.07992 * 120.07666 * 359.97438 * 4 3 2 31 31 H 1.08006 * 119.91861 * 180.02562 * 5 4 3 32 32 H 1.09007 * 113.61114 * 25.42897 * 9 7 6 33 33 H 1.08994 * 113.61465 * 254.52988 * 9 7 6 34 34 H 0.97001 * 120.00157 * 287.51064 * 12 10 9 35 35 H 1.09001 * 109.70902 * 283.94383 * 17 16 15 36 36 H 1.09000 * 109.70817 * 44.52809 * 17 16 15 37 37 H 1.08996 * 109.54461 * 168.35524 * 18 17 16 38 38 H 1.08994 * 109.54096 * 288.62155 * 18 17 16 39 39 H 1.09004 * 109.46260 * 50.44785 * 19 18 17 40 40 H 1.09001 * 109.46003 * 170.41109 * 19 18 17 41 41 H 1.09001 * 109.51391 * 291.12802 * 20 19 18 42 42 H 1.08998 * 109.59563 * 170.79353 * 20 19 18 43 43 H 1.09000 * 109.47161 * 89.99907 * 23 22 21 44 44 H 0.96698 * 114.00355 * 299.99977 * 24 23 22 45 45 H 1.48504 * 109.99999 * 179.97438 * 25 23 22 46 46 H 1.48501 * 110.00135 * 301.31786 * 25 23 22 47 47 H 1.08005 * 126.82227 * 179.73284 * 26 22 21 48 48 H 1.08996 * 113.62012 * 105.47461 * 27 7 6 49 49 H 1.09000 * 113.69201 * 334.57710 * 27 7 6 50 50 H 1.07992 * 119.92646 * 179.74300 * 28 6 5 51 51 H 1.08001 * 120.07579 * 180.22888 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2698 -1.0755 -0.5468 5 6 4.6493 -1.0680 -0.5439 6 6 5.3373 0.0028 -0.0014 7 6 6.8443 0.0035 -0.0013 8 1 7.2680 -0.7871 -0.6207 9 6 7.4598 1.3886 -0.2610 10 6 8.5062 1.0376 0.8098 11 1 8.7588 1.8710 1.4652 12 7 9.6876 0.3562 0.2747 13 6 10.8627 1.0109 0.1906 14 8 10.9424 2.1672 0.5593 15 6 12.0501 0.3262 -0.3478 16 6 13.3008 0.8482 -0.4957 17 6 13.7453 2.2463 -0.1381 18 6 15.2787 2.2676 -0.0990 19 6 15.8201 1.6049 -1.3693 20 6 15.5304 0.1021 -1.3266 21 7 14.1059 -0.1005 -1.0247 22 6 13.3983 -1.2490 -1.2284 23 6 13.9519 -2.5276 -1.8029 24 8 15.0151 -2.2222 -2.7075 25 14 12.6030 -3.4344 -2.7133 26 6 12.1257 -1.0544 -0.8393 27 6 7.4602 0.0805 1.4057 28 6 4.6482 1.0703 0.5464 29 6 3.2688 1.0782 0.5454 30 1 2.7340 -1.9117 -0.9710 31 1 5.1934 -1.8996 -0.9669 32 1 6.8078 2.2157 0.0203 33 1 7.8787 1.4998 -1.2610 34 1 9.6241 -0.5660 -0.0191 35 1 13.3871 2.9495 -0.8899 36 1 13.3483 2.5195 0.8396 37 1 15.6279 3.2988 -0.0484 38 1 15.6287 1.7194 0.7757 39 1 15.3359 2.0431 -2.2421 40 1 16.8963 1.7658 -1.4323 41 1 16.1379 -0.3639 -0.5507 42 1 15.7655 -0.3431 -2.2933 43 1 14.3304 -3.1546 -0.9956 44 1 14.7500 -1.6659 -3.4526 45 1 13.1363 -4.6970 -3.2851 46 1 11.4774 -3.7298 -1.7908 47 1 11.3199 -1.7725 -0.8785 48 1 7.8797 -0.8644 1.7511 49 1 6.8094 0.5495 2.1436 50 1 5.1915 1.9009 0.9719 51 1 2.7321 1.9138 0.9699 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15505404_16915396.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:15:57 Heat of formation + Delta-G solvation = 56.236183 kcal Electronic energy + Delta-G solvation = -33392.094518 eV Core-core repulsion = 29031.056768 eV Total energy + Delta-G solvation = -4361.037750 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.173 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.80265 -41.55295 -40.18953 -38.85899 -38.07898 -37.24090 -36.94523 -34.39584 -33.46677 -32.30948 -32.01907 -31.21181 -29.50470 -27.05418 -26.78775 -26.43973 -24.71993 -24.33462 -23.84134 -23.04658 -21.81798 -21.21672 -20.31585 -19.93877 -19.50760 -18.93285 -17.65090 -17.24017 -16.84130 -16.75396 -16.57813 -16.34508 -16.12219 -15.78771 -15.63641 -15.50076 -15.29764 -15.18589 -15.09696 -14.96900 -14.66765 -14.63487 -14.48616 -14.36989 -14.24816 -13.97561 -13.90592 -13.65353 -13.55879 -13.31754 -13.15804 -12.94742 -12.80388 -12.41635 -12.34432 -12.12612 -12.06439 -11.96360 -11.88886 -11.83513 -11.73527 -11.28555 -10.79161 -10.69281 -10.11791 -9.97391 -9.73925 -9.56421 -9.02655 -5.11770 -0.29812 0.25941 0.83318 0.96773 1.32013 1.53813 1.71942 1.74215 1.93021 1.93244 2.38801 2.66372 2.81795 2.90295 3.11049 3.37989 3.40005 3.49377 3.55530 3.62659 3.65464 3.73182 3.75896 3.76323 3.80934 3.89598 4.08667 4.14378 4.22793 4.22936 4.29498 4.34142 4.37486 4.37916 4.53645 4.59181 4.63732 4.65765 4.68811 4.70967 4.77603 4.80846 4.82470 4.88515 4.93572 4.98633 5.01358 5.07904 5.14223 5.15544 5.20436 5.23814 5.47157 5.67212 5.72400 5.74174 6.02720 6.19759 6.28817 6.54963 6.69876 7.48313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.415 5.415 2 C 0.251 3.749 3 C -0.034 4.034 4 C -0.067 4.067 5 C -0.117 4.117 6 C -0.039 4.039 7 C -0.080 4.080 8 H 0.101 0.899 9 C -0.144 4.144 10 C 0.123 3.877 11 H 0.106 0.894 12 N -0.712 5.712 13 C 0.598 3.402 14 O -0.546 6.546 15 C -0.235 4.235 16 C 0.122 3.878 17 C -0.056 4.056 18 C -0.130 4.130 19 C -0.139 4.139 20 C 0.099 3.901 21 N -0.425 5.425 22 C -0.010 4.010 23 C -0.045 4.045 24 O -0.543 6.543 25 Si 0.718 3.282 26 C -0.168 4.168 27 C -0.136 4.136 28 C -0.118 4.118 29 C -0.066 4.066 30 H 0.133 0.867 31 H 0.133 0.867 32 H 0.096 0.904 33 H 0.077 0.923 34 H 0.400 0.600 35 H 0.089 0.911 36 H 0.100 0.900 37 H 0.080 0.920 38 H 0.067 0.933 39 H 0.076 0.924 40 H 0.088 0.912 41 H 0.081 0.919 42 H 0.107 0.893 43 H 0.116 0.884 44 H 0.380 0.620 45 H -0.253 1.253 46 H -0.252 1.252 47 H 0.147 0.853 48 H 0.078 0.922 49 H 0.099 0.901 50 H 0.135 0.865 51 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.217 -1.034 -2.933 6.951 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.090 5.090 2 C -0.065 4.065 3 C -0.038 4.038 4 C -0.087 4.087 5 C -0.135 4.135 6 C -0.040 4.040 7 C -0.098 4.098 8 H 0.120 0.880 9 C -0.182 4.182 10 C 0.017 3.983 11 H 0.124 0.876 12 N -0.363 5.363 13 C 0.387 3.613 14 O -0.425 6.425 15 C -0.245 4.245 16 C 0.005 3.995 17 C -0.093 4.093 18 C -0.168 4.168 19 C -0.176 4.176 20 C -0.022 4.022 21 N -0.101 5.101 22 C -0.119 4.119 23 C -0.155 4.155 24 O -0.349 6.349 25 Si 0.617 3.383 26 C -0.193 4.193 27 C -0.174 4.174 28 C -0.136 4.136 29 C -0.086 4.086 30 H 0.151 0.849 31 H 0.151 0.849 32 H 0.114 0.886 33 H 0.096 0.904 34 H 0.234 0.766 35 H 0.107 0.893 36 H 0.118 0.882 37 H 0.098 0.902 38 H 0.086 0.914 39 H 0.094 0.906 40 H 0.107 0.893 41 H 0.099 0.901 42 H 0.125 0.875 43 H 0.134 0.866 44 H 0.227 0.773 45 H -0.178 1.178 46 H -0.176 1.176 47 H 0.164 0.836 48 H 0.096 0.904 49 H 0.118 0.882 50 H 0.153 0.847 51 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 4.744 -1.312 -2.390 5.472 hybrid contribution 0.647 -0.515 0.421 0.928 sum 5.390 -1.827 -1.969 6.022 Atomic orbital electron populations 1.81305 1.12106 1.07303 1.08262 1.25759 0.92722 0.94030 0.93950 1.16017 0.84297 0.97795 1.05642 1.21206 0.94326 0.96706 0.96488 1.21019 0.93427 0.98691 1.00357 1.19987 0.95285 0.93593 0.95136 1.21710 0.90321 0.99418 0.98363 0.88038 1.23583 0.97722 0.96254 1.00674 1.21784 0.84238 0.96363 0.95903 0.87607 1.45424 1.08713 1.16257 1.65877 1.17300 0.81837 0.85312 0.76806 1.90770 1.85076 1.16961 1.49687 1.19788 0.93426 0.95414 1.15850 1.20393 0.89363 0.92070 0.97724 1.20521 0.94844 0.89821 1.04149 1.21731 0.95278 1.02068 0.97679 1.21940 1.02781 0.93419 0.99504 1.22306 0.78109 0.97840 1.03919 1.43872 1.09351 1.09489 1.47419 1.20644 0.92107 0.89702 1.09428 1.24889 0.98815 0.95916 0.95928 1.86489 1.35601 1.73716 1.39064 0.94109 0.77090 0.80895 0.86177 1.21725 0.95417 0.95739 1.06398 1.23442 0.97330 1.00637 0.96019 1.20982 0.93351 0.98908 1.00384 1.21201 0.94276 0.96672 0.96493 0.84924 0.84905 0.88575 0.90432 0.76560 0.89272 0.88204 0.90171 0.91381 0.90576 0.89332 0.90088 0.87508 0.86639 0.77255 1.17758 1.17644 0.83579 0.90379 0.88238 0.84687 0.84867 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.16 18.54 41.84 0.78 -1.39 16 2 C 0.25 0.58 15.33 -22.47 -0.34 0.23 16 3 C -0.03 0.01 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.11 9.76 -39.17 -0.38 -0.27 16 5 C -0.12 0.30 9.69 -39.64 -0.38 -0.08 16 6 C -0.04 0.10 5.30 -104.53 -0.55 -0.45 16 7 C -0.08 0.27 3.85 -90.96 -0.35 -0.08 16 8 H 0.10 -0.43 8.09 -51.93 -0.42 -0.85 16 9 C -0.14 0.34 7.25 -25.92 -0.19 0.15 16 10 C 0.12 -0.17 4.32 -67.11 -0.29 -0.46 16 11 H 0.11 0.04 7.46 -51.93 -0.39 -0.34 16 12 N -0.71 0.44 5.26 -54.14 -0.28 0.15 16 13 C 0.60 1.49 7.81 -12.59 -0.10 1.39 16 14 O -0.55 -3.03 14.93 5.26 0.08 -2.95 16 15 C -0.24 -0.41 6.28 -103.48 -0.65 -1.06 16 16 C 0.12 0.17 6.57 -81.64 -0.54 -0.36 16 17 C -0.06 -0.03 5.32 -27.53 -0.15 -0.18 16 18 C -0.13 0.20 5.98 -26.44 -0.16 0.04 16 19 C -0.14 0.37 5.92 -26.59 -0.16 0.22 16 20 C 0.10 -0.19 6.21 -3.70 -0.02 -0.22 16 21 N -0.43 0.03 3.11 -107.38 -0.33 -0.30 16 22 C -0.01 0.00 6.15 -81.87 -0.50 -0.50 16 23 C -0.05 0.08 3.00 36.01 0.11 0.19 16 24 O -0.54 1.18 10.28 -35.23 -0.36 0.82 16 25 Si 0.72 -2.06 31.28 -169.99 -5.32 -7.38 16 26 C -0.17 0.04 9.08 -37.47 -0.34 -0.30 16 27 C -0.14 0.43 7.29 -25.91 -0.19 0.24 16 28 C -0.12 0.30 8.57 -39.64 -0.34 -0.04 16 29 C -0.07 0.11 9.76 -39.17 -0.38 -0.28 16 30 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 31 H 0.13 -0.57 8.05 -52.48 -0.42 -1.00 16 32 H 0.10 -0.28 6.31 -51.92 -0.33 -0.61 16 33 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.40 -1.07 7.83 -40.82 -0.32 -1.39 16 35 H 0.09 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.10 0.19 7.40 -51.93 -0.38 -0.19 16 37 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.07 -0.07 8.12 -51.93 -0.42 -0.49 16 39 H 0.08 -0.20 8.11 -51.93 -0.42 -0.62 16 40 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 41 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 42 H 0.11 -0.34 5.68 -51.93 -0.29 -0.63 16 43 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 44 H 0.38 -2.09 8.27 45.56 0.38 -1.71 16 45 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 46 H -0.25 0.32 6.77 56.52 0.38 0.70 16 47 H 0.15 -0.32 6.29 -52.48 -0.33 -0.65 16 48 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 49 H 0.10 -0.35 7.71 -51.93 -0.40 -0.75 16 50 H 0.14 -0.54 6.66 -52.49 -0.35 -0.89 16 51 H 0.13 -0.37 8.06 -52.49 -0.42 -0.79 16 LS Contribution 415.35 15.07 6.26 6.26 Total: 0.00 -9.12 415.35 -12.82 -21.94 By element: Atomic # 1 Polarization: -7.64 SS G_CDS: -7.11 Total: -14.76 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: -6.52 Total: -2.40 kcal Atomic # 7 Polarization: -1.69 SS G_CDS: 0.16 Total: -1.54 kcal Atomic # 8 Polarization: -1.85 SS G_CDS: -0.28 Total: -2.13 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: -5.32 Total: -7.38 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -9.12 -12.82 -21.94 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15505404_16915396.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.180 kcal (2) G-P(sol) polarization free energy of solvation -9.122 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.944 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds