Wall clock time and date at job start Tue Mar 9 2021 20:16:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43194 * 179.97438 * 2 1 4 4 C 1.39633 * 120.15283 * 41.08303 * 3 2 1 5 5 C 1.37939 * 119.85094 * 180.02562 * 4 3 2 6 6 C 1.38371 * 120.14950 * 0.02562 * 5 4 3 7 7 C 1.50701 * 119.84721 * 179.97438 * 6 5 4 8 8 H 1.09006 * 112.91053 * 11.24878 * 7 6 5 9 9 C 1.53779 * 113.61419 * 142.50085 * 7 6 5 10 10 C 1.53784 * 87.08045 * 139.98099 * 9 7 6 11 11 H 1.09004 * 113.61451 * 220.02152 * 10 9 7 12 12 N 1.46496 * 113.61524 * 89.11591 * 10 9 7 13 13 C 1.34776 * 120.00015 * 107.50411 * 12 10 9 14 14 O 1.21280 * 119.99898 * 359.97438 * 13 12 10 15 15 C 1.50704 * 120.00197 * 180.02562 * 13 12 10 16 16 O 1.42896 * 109.47006 * 179.97438 * 15 13 12 17 17 C 1.35903 * 116.99812 * 179.97438 * 16 15 13 18 18 C 1.38707 * 120.05460 * 179.97438 * 17 16 15 19 19 N 1.48003 * 120.02935 * 359.95976 * 18 17 16 20 20 O 1.21804 * 119.99763 * 179.97438 * 19 18 17 21 21 O 1.21796 * 120.00161 * 0.02562 * 19 18 17 22 22 C 1.38170 * 119.94333 * 179.97438 * 18 17 16 23 23 C 1.38242 * 120.05826 * 0.02562 * 22 18 17 24 24 C 1.50693 * 119.94737 * 179.97438 * 23 22 18 25 25 O 1.42898 * 109.47261 * 300.00317 * 24 23 22 26 26 Si 1.86303 * 109.47109 * 180.02562 * 24 23 22 27 27 C 1.38299 * 120.10751 * 359.97438 * 23 22 18 28 28 C 1.38127 * 120.05473 * 359.73951 * 27 23 22 29 29 C 1.53779 * 113.61123 * 239.99992 * 7 6 5 30 30 C 1.38362 * 120.30413 * 0.22919 * 6 5 4 31 31 C 1.37949 * 120.14715 * 359.48951 * 30 6 5 32 32 H 1.08001 * 120.07619 * 359.97438 * 4 3 2 33 33 H 1.08000 * 119.92902 * 179.97438 * 5 4 3 34 34 H 1.09002 * 113.61557 * 25.43210 * 9 7 6 35 35 H 1.09004 * 113.61501 * 254.52631 * 9 7 6 36 36 H 0.96998 * 120.00377 * 287.50245 * 12 10 9 37 37 H 1.09003 * 109.46837 * 299.99928 * 15 13 12 38 38 H 1.09000 * 109.47088 * 59.99953 * 15 13 12 39 39 H 1.08001 * 119.97181 * 180.02562 * 22 18 17 40 40 H 1.08996 * 109.47058 * 60.00358 * 24 23 22 41 41 H 0.96698 * 113.99863 * 300.00021 * 25 24 23 42 42 H 1.48501 * 109.99904 * 180.02562 * 26 24 23 43 43 H 1.48509 * 109.99817 * 301.31892 * 26 24 23 44 44 H 1.07993 * 119.96985 * 179.97438 * 27 23 22 45 45 H 1.07995 * 120.02316 * 180.27536 * 28 27 23 46 46 H 1.08997 * 113.61646 * 105.47284 * 29 7 6 47 47 H 1.08998 * 113.69354 * 334.57592 * 29 7 6 48 48 H 1.07997 * 119.92444 * 179.72282 * 30 6 5 49 49 H 1.08000 * 120.07285 * 180.25584 * 31 30 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2697 -0.9091 -0.7934 5 6 4.6491 -0.9034 -0.7883 6 6 5.3374 0.0009 0.0012 7 6 6.8444 0.0008 0.0021 8 1 7.2691 -0.6125 -0.7927 9 6 7.4604 1.4069 0.0912 10 6 8.5061 0.8028 1.0433 11 1 8.7577 1.4505 1.8832 12 7 9.6875 0.2734 0.3576 13 6 10.8629 0.9280 0.4375 14 8 10.9424 1.9556 1.0767 15 6 12.0781 0.3837 -0.2682 16 8 13.1915 1.2486 -0.0352 17 6 14.3745 0.8987 -0.6055 18 6 15.4965 1.6931 -0.4210 19 7 15.4065 2.9236 0.3965 20 8 16.3922 3.6205 0.5585 21 8 14.3471 3.2387 0.9081 22 6 16.6981 1.3350 -1.0014 23 6 16.7826 0.1862 -1.7659 24 6 18.0943 -0.2017 -2.3983 25 8 18.5214 0.8353 -3.2837 26 14 17.8778 -1.7851 -3.3558 27 6 15.6654 -0.6075 -1.9513 28 6 14.4633 -0.2569 -1.3683 29 6 7.4595 -0.2708 1.3851 30 6 4.6483 0.9016 0.7939 31 6 3.2689 0.9106 0.7938 32 1 2.7338 -1.6163 -1.4092 33 1 5.1932 -1.6068 -1.4011 34 1 6.8087 2.1399 0.5668 35 1 7.8800 1.7603 -0.8508 36 1 9.6239 -0.5483 -0.1539 37 1 12.3046 -0.6118 0.1137 38 1 11.8811 0.3260 -1.3387 39 1 17.5721 1.9530 -0.8578 40 1 18.8438 -0.3468 -1.6203 41 1 17.9013 1.0188 -4.0027 42 1 19.1646 -2.1788 -3.9839 43 1 17.4029 -2.8640 -2.4526 44 1 15.7338 -1.5042 -2.5493 45 1 13.5922 -0.8795 -1.5098 46 1 7.8784 -1.2718 1.4878 47 1 6.8085 0.0029 2.2154 48 1 5.1917 1.6017 1.4111 49 1 2.7323 1.6170 1.4099 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15505404_4549638.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:16:39 Heat of formation + Delta-G solvation = 21.638038 kcal Electronic energy + Delta-G solvation = -36454.692498 eV Core-core repulsion = 31318.956982 eV Total energy + Delta-G solvation = -5135.735516 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.140 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -43.05233 -41.98696 -41.58929 -40.64037 -39.76299 -38.95800 -37.56838 -37.32026 -37.14699 -34.83478 -33.54818 -32.54411 -32.37639 -32.17403 -30.06483 -27.63036 -27.05113 -26.97907 -26.61598 -24.37645 -23.98729 -23.44236 -22.85015 -22.09921 -20.61862 -20.45561 -20.01761 -19.48023 -19.23636 -18.63509 -18.37616 -18.30204 -17.76032 -17.60574 -17.12413 -16.92923 -16.71327 -16.52806 -16.30268 -15.90503 -15.82440 -15.71554 -15.45808 -15.12502 -14.99182 -14.86445 -14.77390 -14.48233 -14.29198 -14.16543 -14.03422 -13.93253 -13.74133 -13.71325 -13.34770 -13.28962 -13.09742 -12.61649 -12.48693 -12.44197 -12.22454 -12.15139 -12.10484 -11.93871 -11.87884 -11.76031 -11.48131 -11.06653 -10.97055 -10.79694 -10.33462 -10.19438 -9.94525 -9.84407 -5.33581 -1.16557 -0.41921 -0.38880 0.17006 0.34970 0.50152 0.96561 1.01624 1.31263 1.33057 1.68061 1.72837 1.84947 1.89901 2.09575 2.73271 2.82877 2.94893 2.97191 3.16363 3.17412 3.21234 3.31806 3.38986 3.43223 3.48515 3.51801 3.56482 3.63174 3.67343 3.72111 3.73655 3.92804 4.10527 4.12241 4.12962 4.26633 4.27180 4.39042 4.39666 4.49004 4.57445 4.61243 4.64070 4.64840 4.77327 4.81944 4.87106 4.88911 5.04601 5.15358 5.25517 5.38143 5.42205 5.63023 5.66929 6.14779 6.30056 6.48753 6.90949 6.94071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.249 3.751 3 C -0.032 4.032 4 C -0.067 4.067 5 C -0.116 4.116 6 C -0.042 4.042 7 C -0.079 4.079 8 H 0.102 0.898 9 C -0.144 4.144 10 C 0.121 3.879 11 H 0.110 0.890 12 N -0.711 5.711 13 C 0.516 3.484 14 O -0.492 6.492 15 C 0.031 3.969 16 O -0.254 6.254 17 C 0.200 3.800 18 C -0.075 4.075 19 N 0.028 4.972 20 O -0.177 6.177 21 O -0.118 6.118 22 C 0.009 3.991 23 C -0.157 4.157 24 C -0.066 4.066 25 O -0.535 6.535 26 Si 0.692 3.308 27 C -0.025 4.025 28 C -0.209 4.209 29 C -0.134 4.134 30 C -0.118 4.118 31 C -0.066 4.066 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.099 0.901 35 H 0.077 0.923 36 H 0.402 0.598 37 H 0.102 0.898 38 H 0.103 0.897 39 H 0.165 0.835 40 H 0.121 0.879 41 H 0.381 0.619 42 H -0.248 1.248 43 H -0.254 1.254 44 H 0.149 0.851 45 H 0.157 0.843 46 H 0.079 0.921 47 H 0.102 0.898 48 H 0.136 0.864 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.048 -9.027 -6.268 11.040 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.035 4.035 4 C -0.087 4.087 5 C -0.134 4.134 6 C -0.043 4.043 7 C -0.097 4.097 8 H 0.120 0.880 9 C -0.182 4.182 10 C 0.016 3.984 11 H 0.128 0.872 12 N -0.365 5.365 13 C 0.300 3.700 14 O -0.363 6.363 15 C -0.048 4.048 16 O -0.163 6.163 17 C 0.150 3.850 18 C -0.160 4.160 19 N 0.548 4.452 20 O -0.385 6.385 21 O -0.342 6.342 22 C -0.010 4.010 23 C -0.159 4.159 24 C -0.176 4.176 25 O -0.341 6.341 26 Si 0.593 3.407 27 C -0.043 4.043 28 C -0.228 4.228 29 C -0.172 4.172 30 C -0.136 4.136 31 C -0.086 4.086 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.118 0.882 35 H 0.096 0.904 36 H 0.237 0.763 37 H 0.120 0.880 38 H 0.121 0.879 39 H 0.182 0.818 40 H 0.138 0.862 41 H 0.229 0.771 42 H -0.173 1.173 43 H -0.179 1.179 44 H 0.166 0.834 45 H 0.174 0.826 46 H 0.098 0.902 47 H 0.121 0.879 48 H 0.153 0.847 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.166 -9.481 -5.741 11.085 hybrid contribution 0.334 -0.093 0.328 0.477 sum 0.500 -9.574 -5.413 11.010 Atomic orbital electron populations 1.81314 1.12090 1.07557 1.07775 1.25751 0.92718 0.94082 0.94064 1.16020 0.84340 1.00682 1.02465 1.21211 0.94333 0.96641 0.96562 1.21001 0.93445 0.99269 0.99718 1.19945 0.95130 0.94428 0.94799 1.21712 0.90597 0.98739 0.98701 0.88023 1.23598 0.97585 0.95975 1.01072 1.21888 0.83723 0.96692 0.96142 0.87198 1.45435 1.08536 1.28322 1.54223 1.19815 0.83550 0.84946 0.81705 1.90877 1.84041 1.22323 1.39107 1.22721 0.85335 0.94565 1.02147 1.86504 1.14813 1.47729 1.67225 1.18684 0.84811 0.91540 0.89965 1.20590 0.95515 0.91665 1.08195 1.43337 1.00778 1.01303 0.99733 1.94562 1.27982 1.50055 1.65942 1.94695 1.16654 1.75185 1.47636 1.20841 0.95544 0.95049 0.89537 1.20322 0.97225 0.96161 1.02166 1.25099 0.93986 1.01722 0.96830 1.86564 1.48930 1.56306 1.42276 0.94922 0.85856 0.74812 0.85088 1.21273 0.91126 0.97665 0.94222 1.21266 1.00806 0.97500 1.03249 1.23441 0.97071 0.99660 0.97017 1.20985 0.93397 0.99425 0.99777 1.21214 0.94281 0.96581 0.96531 0.84881 0.84923 0.88230 0.90389 0.76327 0.88015 0.87922 0.81800 0.86151 0.77126 1.17268 1.17916 0.83400 0.82588 0.90211 0.87935 0.84663 0.84798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.90 18.54 41.84 0.78 -1.12 16 2 C 0.25 0.40 15.33 -22.48 -0.34 0.05 16 3 C -0.03 0.04 5.73 -106.93 -0.61 -0.57 16 4 C -0.07 0.18 9.76 -39.17 -0.38 -0.20 16 5 C -0.12 0.45 9.69 -39.64 -0.38 0.07 16 6 C -0.04 0.17 5.30 -104.53 -0.55 -0.38 16 7 C -0.08 0.43 3.85 -90.96 -0.35 0.08 16 8 H 0.10 -0.69 8.09 -51.93 -0.42 -1.11 16 9 C -0.14 0.61 7.25 -25.92 -0.19 0.42 16 10 C 0.12 -0.45 4.32 -67.12 -0.29 -0.74 16 11 H 0.11 -0.16 7.47 -51.93 -0.39 -0.55 16 12 N -0.71 3.22 5.26 -53.01 -0.28 2.94 16 13 C 0.52 -0.54 7.91 -10.98 -0.09 -0.63 16 14 O -0.49 -2.33 16.10 -14.35 -0.23 -2.56 16 15 C 0.03 -0.12 5.22 36.01 0.19 0.07 16 16 O -0.25 -0.28 7.68 -49.79 -0.38 -0.66 16 17 C 0.20 -0.04 6.67 -39.22 -0.26 -0.30 16 18 C -0.08 -0.16 6.87 -79.81 -0.55 -0.70 16 19 N 0.03 0.17 4.45 34.03 0.15 0.32 16 20 O -0.18 -1.20 18.45 -29.46 -0.54 -1.74 16 21 O -0.12 -0.93 17.24 -36.49 -0.63 -1.56 16 22 C 0.01 0.00 9.11 -39.60 -0.36 -0.36 16 23 C -0.16 0.43 5.39 -104.60 -0.56 -0.14 16 24 C -0.07 0.20 2.82 36.00 0.10 0.30 16 25 O -0.54 1.11 12.77 -35.23 -0.45 0.66 16 26 Si 0.69 -2.97 29.78 -169.99 -5.06 -8.03 16 27 C -0.03 0.12 8.66 -39.60 -0.34 -0.23 16 28 C -0.21 0.89 9.04 -39.43 -0.36 0.53 16 29 C -0.13 0.72 7.29 -25.92 -0.19 0.53 16 30 C -0.12 0.43 8.57 -39.64 -0.34 0.09 16 31 C -0.07 0.16 9.76 -39.17 -0.38 -0.22 16 32 H 0.13 -0.50 8.06 -52.49 -0.42 -0.93 16 33 H 0.13 -0.77 8.05 -52.49 -0.42 -1.19 16 34 H 0.10 -0.43 6.31 -51.93 -0.33 -0.76 16 35 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 36 H 0.40 -3.21 8.70 -40.82 -0.36 -3.57 16 37 H 0.10 -0.72 7.65 -51.93 -0.40 -1.11 16 38 H 0.10 -0.75 7.68 -51.93 -0.40 -1.15 16 39 H 0.16 0.01 7.61 -52.49 -0.40 -0.39 16 40 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 41 H 0.38 -2.32 8.70 45.56 0.40 -1.92 16 42 H -0.25 0.11 7.11 56.52 0.40 0.51 16 43 H -0.25 0.63 7.11 56.52 0.40 1.04 16 44 H 0.15 -1.08 4.87 -52.49 -0.26 -1.34 16 45 H 0.16 -1.25 6.30 -52.49 -0.33 -1.58 16 46 H 0.08 -0.47 8.14 -51.93 -0.42 -0.90 16 47 H 0.10 -0.54 7.71 -51.93 -0.40 -0.94 16 48 H 0.14 -0.69 6.66 -52.49 -0.35 -1.04 16 49 H 0.13 -0.47 8.06 -52.49 -0.42 -0.89 16 LS Contribution 429.18 15.07 6.47 6.47 Total: 0.00 -15.06 429.18 -11.78 -26.84 By element: Atomic # 1 Polarization: -13.87 SS G_CDS: -5.35 Total: -19.22 kcal Atomic # 6 Polarization: 3.92 SS G_CDS: -6.25 Total: -2.32 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: 0.65 Total: 2.14 kcal Atomic # 8 Polarization: -3.63 SS G_CDS: -2.24 Total: -5.87 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: -5.06 Total: -8.03 kcal Total LS contribution 6.47 Total: 6.47 kcal Total: -15.06 -11.78 -26.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15505404_4549638.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.475 kcal (2) G-P(sol) polarization free energy of solvation -15.056 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.837 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.638 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds