Wall clock time and date at job start Tue Mar 9 2021 20:16:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39635 * 120.14887 * 300.22594 * 3 2 1 5 5 C 1.37947 * 119.83952 * 180.21743 * 4 3 2 6 6 C 1.38369 * 120.15319 * 359.51436 * 5 4 3 7 7 C 1.50701 * 119.84754 * 180.27879 * 6 5 4 8 8 H 1.08997 * 112.84984 * 9.67046 * 7 6 5 9 9 C 1.53780 * 113.61314 * 140.86310 * 7 6 5 10 10 C 1.53959 * 87.01698 * 139.95083 * 9 7 6 11 11 H 1.08996 * 113.66732 * 220.06861 * 10 9 7 12 12 N 1.46497 * 113.53388 * 89.18873 * 10 9 7 13 13 C 1.34782 * 120.00111 * 107.50349 * 12 10 9 14 14 O 1.21282 * 119.99498 * 0.02562 * 13 12 10 15 15 C 1.50696 * 120.00454 * 179.97438 * 13 12 10 16 16 O 1.42892 * 109.47312 * 180.02562 * 15 13 12 17 17 C 1.35903 * 116.99944 * 180.02562 * 16 15 13 18 18 C 1.38716 * 120.05367 * 179.73295 * 17 16 15 19 19 C 1.38171 * 119.93818 * 179.72228 * 18 17 16 20 20 C 1.50701 * 119.96985 * 180.27390 * 19 18 17 21 21 O 1.42900 * 109.47629 * 65.29291 * 20 19 18 22 22 Si 1.86300 * 109.47214 * 185.29410 * 20 19 18 23 23 C 1.38238 * 120.05861 * 0.56607 * 19 18 17 24 24 C 1.38285 * 120.11308 * 359.67996 * 23 19 18 25 25 C 1.38125 * 120.05315 * 0.04672 * 24 23 19 26 26 C 1.53779 * 87.11302 * 334.63940 * 10 9 7 27 27 C 1.38365 * 120.30349 * 0.26056 * 6 5 4 28 28 C 1.37940 * 120.15144 * 359.97019 * 27 6 5 29 29 H 1.07990 * 120.08265 * 0.02562 * 4 3 2 30 30 H 1.08002 * 119.92527 * 179.79885 * 5 4 3 31 31 H 1.08995 * 113.61380 * 254.52802 * 9 7 6 32 32 H 1.09003 * 113.61094 * 25.43549 * 9 7 6 33 33 H 0.96999 * 120.00106 * 287.50525 * 12 10 9 34 34 H 1.09002 * 109.47491 * 300.00637 * 15 13 12 35 35 H 1.09006 * 109.46544 * 60.00226 * 15 13 12 36 36 H 1.07996 * 120.03081 * 359.97438 * 18 17 16 37 37 H 1.09000 * 109.47014 * 305.29387 * 20 19 18 38 38 H 0.96701 * 113.99819 * 59.99862 * 21 20 19 39 39 H 1.48503 * 109.99758 * 58.67963 * 22 20 19 40 40 H 1.48502 * 110.00020 * 179.97438 * 22 20 19 41 41 H 1.08003 * 119.94455 * 179.70484 * 23 19 18 42 42 H 1.08003 * 119.97550 * 180.02562 * 24 23 19 43 43 H 1.08007 * 120.02677 * 179.97438 * 25 24 23 44 44 H 1.09003 * 113.61121 * 270.80940 * 26 10 9 45 45 H 1.08996 * 113.69152 * 139.91595 * 26 10 9 46 46 H 1.07994 * 119.92100 * 180.02562 * 27 6 5 47 47 H 1.08003 * 120.07717 * 180.02562 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2697 -0.6069 1.0433 5 6 4.6491 -0.5986 1.0392 6 6 5.3374 0.0010 -0.0007 7 6 6.8444 0.0006 -0.0014 8 1 7.2679 -0.6406 0.7717 9 6 7.4597 -0.2236 -1.3928 10 6 8.5065 0.8394 -1.0127 11 1 8.7583 1.5169 -1.8285 12 7 9.6877 0.2852 -0.3465 13 6 10.8628 0.2187 -1.0032 14 8 10.9423 0.6182 -2.1456 15 6 12.0780 -0.3508 -0.3178 16 8 13.1912 -0.3130 -1.2128 17 6 14.3739 -0.7939 -0.7470 18 6 15.4946 -0.7927 -1.5645 19 6 16.6973 -1.2769 -1.0866 20 6 17.9167 -1.2702 -1.9720 21 8 18.2880 0.0790 -2.2615 22 14 19.3221 -2.1275 -1.0999 23 6 16.7814 -1.7730 0.2009 24 6 15.6644 -1.7800 1.0161 25 6 14.4612 -1.2919 0.5451 26 6 7.4609 1.4089 -0.0395 27 6 4.6484 0.6008 -1.0399 28 6 3.2691 0.6040 -1.0461 29 1 2.7337 -1.0794 1.8530 30 1 5.1931 -1.0653 1.8471 31 1 7.8783 -1.2207 -1.5296 32 1 6.8078 0.0790 -2.2123 33 1 9.6241 -0.0340 0.5673 34 1 12.3052 0.2403 0.5694 35 1 11.8805 -1.3824 -0.0263 36 1 15.4282 -0.4099 -2.5722 37 1 17.6933 -1.7930 -2.9020 38 1 18.5010 0.6049 -1.4785 39 1 18.9369 -3.5220 -0.7650 40 1 20.5306 -2.1281 -1.9630 41 1 17.7212 -2.1555 0.5710 42 1 15.7328 -2.1678 2.0218 43 1 13.5889 -1.2980 1.1820 44 1 6.8094 2.1587 -0.4884 45 1 7.8791 1.7284 0.9150 46 1 5.1919 1.0666 -1.8486 47 1 2.7325 1.0721 -1.8581 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15505404_4860298.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:16:51 Heat of formation + Delta-G solvation = 13.602210 kcal Electronic energy + Delta-G solvation = -29754.719476 eV Core-core repulsion = 25449.651935 eV Total energy + Delta-G solvation = -4305.067540 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.146 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.90928 -41.38964 -40.50490 -39.41701 -38.70573 -37.33048 -37.20733 -34.78732 -32.56885 -32.46986 -32.20980 -31.60558 -29.42124 -27.01297 -26.95988 -26.64386 -24.06226 -23.73219 -23.61544 -22.72596 -21.72117 -20.51156 -20.00215 -19.39119 -18.62119 -17.70726 -17.67819 -17.49768 -17.20118 -16.88612 -16.80447 -16.55507 -16.16170 -15.84290 -15.62162 -15.49705 -15.16581 -15.08644 -14.89684 -14.76039 -14.66535 -14.44293 -14.18967 -14.16724 -14.00454 -13.75132 -13.73350 -13.55104 -13.27544 -13.07225 -12.99910 -12.60804 -12.46911 -12.24012 -12.09202 -11.98926 -11.92056 -11.70396 -11.46552 -10.99354 -10.49068 -10.30185 -10.18216 -9.98474 -9.83143 -9.32049 -5.04596 -0.37828 0.14993 0.18072 0.35014 1.22492 1.36745 1.37741 1.63034 1.68765 1.85902 1.96507 2.45178 2.61719 2.74221 2.83716 3.19510 3.33787 3.41401 3.46081 3.47361 3.60039 3.63425 3.68818 3.72893 3.73513 3.82074 3.83017 3.94963 3.95501 4.13640 4.14193 4.27881 4.30998 4.41363 4.49054 4.50233 4.57196 4.58849 4.63612 4.66795 4.79024 4.83562 4.89087 4.91663 5.05814 5.16262 5.17682 5.29205 5.29668 5.38745 5.42344 5.59575 5.64109 6.14896 6.30152 6.49465 6.56516 6.99175 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.413 5.413 2 C 0.250 3.750 3 C -0.032 4.032 4 C -0.067 4.067 5 C -0.116 4.116 6 C -0.042 4.042 7 C -0.079 4.079 8 H 0.102 0.898 9 C -0.144 4.144 10 C 0.120 3.880 11 H 0.109 0.891 12 N -0.711 5.711 13 C 0.519 3.481 14 O -0.508 6.508 15 C 0.041 3.959 16 O -0.288 6.288 17 C 0.129 3.871 18 C -0.120 4.120 19 C -0.079 4.079 20 C -0.071 4.071 21 O -0.537 6.537 22 Si 0.692 3.308 23 C -0.152 4.152 24 C -0.073 4.073 25 C -0.206 4.206 26 C -0.134 4.134 27 C -0.118 4.118 28 C -0.066 4.066 29 H 0.133 0.867 30 H 0.133 0.867 31 H 0.077 0.923 32 H 0.099 0.901 33 H 0.403 0.597 34 H 0.096 0.904 35 H 0.095 0.905 36 H 0.136 0.864 37 H 0.115 0.885 38 H 0.379 0.621 39 H -0.257 1.257 40 H -0.254 1.254 41 H 0.130 0.870 42 H 0.132 0.868 43 H 0.130 0.870 44 H 0.102 0.898 45 H 0.080 0.920 46 H 0.135 0.865 47 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.779 -0.550 7.586 8.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.088 5.088 2 C -0.066 4.066 3 C -0.035 4.035 4 C -0.087 4.087 5 C -0.134 4.134 6 C -0.043 4.043 7 C -0.098 4.098 8 H 0.120 0.880 9 C -0.182 4.182 10 C 0.015 3.985 11 H 0.127 0.873 12 N -0.365 5.365 13 C 0.303 3.697 14 O -0.381 6.381 15 C -0.038 4.038 16 O -0.201 6.201 17 C 0.084 3.916 18 C -0.139 4.139 19 C -0.080 4.080 20 C -0.181 4.181 21 O -0.343 6.343 22 Si 0.593 3.407 23 C -0.170 4.170 24 C -0.091 4.091 25 C -0.225 4.225 26 C -0.172 4.172 27 C -0.136 4.136 28 C -0.086 4.086 29 H 0.151 0.849 30 H 0.151 0.849 31 H 0.096 0.904 32 H 0.117 0.883 33 H 0.238 0.762 34 H 0.114 0.886 35 H 0.113 0.887 36 H 0.154 0.846 37 H 0.133 0.867 38 H 0.227 0.773 39 H -0.182 1.182 40 H -0.179 1.179 41 H 0.147 0.853 42 H 0.150 0.850 43 H 0.148 0.852 44 H 0.120 0.880 45 H 0.099 0.901 46 H 0.153 0.847 47 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.509 -1.039 5.901 6.496 hybrid contribution -0.421 -0.379 0.432 0.713 sum 2.088 -1.418 6.334 6.818 Atomic orbital electron populations 1.81314 1.12085 1.08063 1.07298 1.25754 0.92716 0.94034 0.94090 1.16023 0.84335 1.04809 0.98365 1.21214 0.94327 0.96461 0.96721 1.21012 0.93451 1.00169 0.98786 1.19952 0.95136 0.95348 0.93834 1.21712 0.90579 0.98309 0.99167 0.88013 1.23623 0.97601 1.00528 0.96488 1.21913 0.83829 0.96161 0.96590 0.87326 1.45470 1.08639 1.64878 1.17509 1.20043 0.83733 0.79017 0.86874 1.90800 1.84405 1.45650 1.17246 1.22450 0.85398 1.02727 0.93226 1.86174 1.15657 1.78358 1.39871 1.19038 0.85480 0.94458 0.92665 1.20287 0.89682 1.03198 1.00731 1.20161 0.95112 0.98013 0.94711 1.25135 1.00081 0.89911 1.03015 1.86531 1.89668 1.21721 1.36353 0.94709 0.77898 0.81562 0.86504 1.20929 0.98949 1.03302 0.93830 1.20911 0.91678 0.96839 0.99654 1.21291 0.99872 1.05921 0.95398 1.23438 0.97070 0.96239 1.00452 1.20973 0.93397 1.00284 0.98943 1.21207 0.94268 0.96486 0.96662 0.84866 0.84900 0.90413 0.88300 0.76244 0.88641 0.88725 0.84636 0.86714 0.77326 1.18221 1.17923 0.85308 0.85045 0.85230 0.87966 0.90147 0.84707 0.84809 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -1.98 18.54 41.84 0.78 -1.20 16 2 C 0.25 0.45 15.33 -22.47 -0.34 0.11 16 3 C -0.03 0.03 5.73 -106.93 -0.61 -0.58 16 4 C -0.07 0.16 9.76 -39.17 -0.38 -0.23 16 5 C -0.12 0.40 9.69 -39.64 -0.38 0.02 16 6 C -0.04 0.15 5.30 -104.53 -0.55 -0.40 16 7 C -0.08 0.39 3.85 -90.96 -0.35 0.04 16 8 H 0.10 -0.61 8.08 -51.93 -0.42 -1.03 16 9 C -0.14 0.53 7.26 -25.83 -0.19 0.34 16 10 C 0.12 -0.37 4.33 -67.03 -0.29 -0.66 16 11 H 0.11 -0.11 7.47 -51.93 -0.39 -0.49 16 12 N -0.71 2.48 5.26 -52.93 -0.28 2.21 16 13 C 0.52 0.03 7.91 -10.99 -0.09 -0.06 16 14 O -0.51 -2.70 16.10 -14.35 -0.23 -2.93 16 15 C 0.04 -0.08 5.22 36.00 0.19 0.11 16 16 O -0.29 -0.66 9.67 -39.35 -0.38 -1.04 16 17 C 0.13 0.17 6.69 -39.22 -0.26 -0.09 16 18 C -0.12 -0.23 9.63 -39.43 -0.38 -0.61 16 19 C -0.08 -0.03 5.35 -104.65 -0.56 -0.59 16 20 C -0.07 0.00 2.80 36.01 0.10 0.10 16 21 O -0.54 -0.32 12.84 -35.23 -0.45 -0.77 16 22 Si 0.69 -0.86 29.80 -169.99 -5.07 -5.93 16 23 C -0.15 0.16 8.67 -39.56 -0.34 -0.19 16 24 C -0.07 0.11 10.04 -39.61 -0.40 -0.28 16 25 C -0.21 0.23 9.04 -39.43 -0.36 -0.13 16 26 C -0.13 0.65 7.29 -25.92 -0.19 0.46 16 27 C -0.12 0.39 8.51 -39.64 -0.34 0.05 16 28 C -0.07 0.15 9.76 -39.17 -0.38 -0.23 16 29 H 0.13 -0.46 8.06 -52.49 -0.42 -0.88 16 30 H 0.13 -0.71 8.04 -52.49 -0.42 -1.13 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.10 -0.39 6.38 -51.93 -0.33 -0.72 16 33 H 0.40 -2.71 8.70 -40.82 -0.36 -3.06 16 34 H 0.10 -0.44 7.66 -51.93 -0.40 -0.84 16 35 H 0.09 -0.43 7.66 -51.93 -0.40 -0.83 16 36 H 0.14 0.35 8.06 -52.49 -0.42 -0.07 16 37 H 0.12 0.06 7.96 -51.93 -0.41 -0.35 16 38 H 0.38 -1.31 8.70 45.56 0.40 -0.91 16 39 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 40 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 41 H 0.13 -0.39 4.90 -52.48 -0.26 -0.65 16 42 H 0.13 -0.52 8.06 -52.48 -0.42 -0.94 16 43 H 0.13 -0.50 6.30 -52.48 -0.33 -0.83 16 44 H 0.10 -0.50 7.63 -51.93 -0.40 -0.90 16 45 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 46 H 0.14 -0.65 6.70 -52.49 -0.35 -1.00 16 47 H 0.13 -0.44 8.06 -52.48 -0.42 -0.86 16 LS Contribution 403.26 15.07 6.08 6.08 Total: 0.00 -11.92 403.26 -11.46 -23.39 By element: Atomic # 1 Polarization: -11.18 SS G_CDS: -5.80 Total: -16.98 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -6.11 Total: -2.82 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: 0.50 Total: 1.00 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -1.06 Total: -4.74 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.07 Total: -5.93 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -11.92 -11.46 -23.39 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15505404_4860298.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.989 kcal (2) G-P(sol) polarization free energy of solvation -11.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.066 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.464 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.387 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds