Wall clock time and date at job start Tue Mar 9 2021 20:16:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35983 * 116.99932 * 2 1 4 4 C 1.38675 * 119.99435 * 180.02562 * 3 2 1 5 5 C 1.38156 * 119.99598 * 179.74418 * 4 3 2 6 6 C 1.50701 * 120.00294 * 180.25009 * 5 4 3 7 7 O 1.42901 * 109.47210 * 255.25818 * 6 5 4 8 8 Si 1.86304 * 109.46852 * 15.25443 * 6 5 4 9 9 C 1.38672 * 120.00103 * 0.50496 * 5 4 3 10 10 O 1.35983 * 120.00412 * 179.74418 * 9 5 4 11 11 C 1.42897 * 117.00294 * 179.72695 * 10 9 5 12 12 C 1.50702 * 109.47333 * 180.02562 * 11 10 9 13 13 O 1.21277 * 119.99733 * 359.97438 * 12 11 10 14 14 N 1.34778 * 119.99797 * 180.02562 * 12 11 10 15 15 C 1.46503 * 119.99418 * 180.02562 * 14 12 11 16 16 H 1.09000 * 112.85288 * 23.80409 * 15 14 12 17 17 C 1.53783 * 113.61007 * 154.99668 * 15 14 12 18 18 C 1.53786 * 87.08050 * 89.11544 * 17 15 14 19 19 H 1.09002 * 113.61357 * 270.88070 * 18 17 15 20 20 C 1.50697 * 113.61519 * 140.06465 * 18 17 15 21 21 C 1.38366 * 119.84756 * 301.25120 * 20 18 17 22 22 C 1.37943 * 120.15503 * 179.76737 * 21 20 18 23 23 C 1.39632 * 119.84327 * 0.53239 * 22 21 20 24 24 C 1.43199 * 120.15375 * 179.70440 * 23 22 21 25 25 N 9.69842 * 152.51469 * 213.24572 * 14 1 2 26 26 C 1.39635 * 119.69871 * 359.71854 * 23 22 21 27 27 C 1.37947 * 119.84795 * 0.02562 * 26 23 22 28 28 C 1.53781 * 87.17350 * 25.47154 * 18 17 15 29 29 C 1.38726 * 119.99651 * 359.47084 * 9 5 4 30 30 C 1.38108 * 120.00143 * 0.27574 * 29 9 5 31 31 H 1.09007 * 109.46911 * 300.00242 * 1 2 3 32 32 H 1.08999 * 109.46746 * 60.00191 * 1 2 3 33 33 H 1.08993 * 109.47122 * 180.02562 * 1 2 3 34 34 H 1.08001 * 120.00651 * 359.97438 * 4 3 2 35 35 H 1.08995 * 109.47201 * 135.25446 * 6 5 4 36 36 H 0.96698 * 114.00333 * 59.99304 * 7 6 5 37 37 H 1.48503 * 109.99960 * 180.02562 * 8 6 5 38 38 H 1.48496 * 109.99875 * 301.32034 * 8 6 5 39 39 H 1.08994 * 109.47289 * 59.99737 * 11 10 9 40 40 H 1.09004 * 109.46953 * 300.00448 * 11 10 9 41 41 H 0.96995 * 120.00261 * 359.97438 * 14 12 11 42 42 H 1.08992 * 113.61796 * 334.56401 * 17 15 14 43 43 H 1.09000 * 113.61157 * 203.65821 * 17 15 14 44 44 H 1.08000 * 119.92392 * 0.02562 * 21 20 18 45 45 H 1.08002 * 120.08125 * 180.25569 * 22 21 20 46 46 H 1.08002 * 120.07968 * 179.97438 * 26 23 22 47 47 H 1.07993 * 119.92691 * 179.97438 * 27 26 23 48 48 H 1.08999 * 113.61567 * 89.07405 * 28 18 17 49 49 H 1.08998 * 113.61196 * 219.97759 * 28 18 17 50 50 H 1.08009 * 119.99799 * 180.25313 * 29 9 5 51 51 H 1.07998 * 119.99998 * 180.02562 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2841 -0.0005 5 6 4.0585 2.5150 -0.0059 6 6 5.5634 2.5939 -0.0122 7 8 6.0265 2.9642 1.2881 8 14 6.2704 0.9331 -0.4734 9 6 3.3033 3.6781 -0.0001 10 8 3.9206 4.8897 -0.0001 11 6 3.0808 6.0458 -0.0001 12 6 3.9350 7.2873 -0.0007 13 8 5.1440 7.1915 -0.0007 14 7 3.3553 8.5041 -0.0003 15 6 4.1858 9.7110 -0.0015 16 1 5.1824 9.5387 -0.4080 17 6 3.4822 10.9422 -0.5965 18 6 2.9656 11.2347 0.8222 19 1 2.0141 10.7533 1.0482 20 6 2.9803 12.6984 1.1802 21 6 4.1708 13.4030 1.1491 22 6 4.1908 14.7442 1.4710 23 6 3.0079 15.3881 1.8395 24 6 3.0222 16.7787 2.1811 25 7 3.0309 17.8814 2.4533 26 6 1.8110 14.6698 1.8738 27 6 1.8045 13.3302 1.5443 28 6 4.1872 10.4603 1.3445 29 6 1.9180 3.6055 -0.0001 30 6 1.2909 2.3750 0.0000 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0276 0.0005 34 1 4.0195 0.3783 -0.0005 35 1 5.8851 3.3402 -0.7386 36 1 5.7761 2.3438 1.9862 37 1 7.7540 0.9974 -0.4826 38 1 5.8132 -0.0991 0.4913 39 1 2.4515 6.0377 0.8898 40 1 2.4514 6.0377 -0.8900 41 1 2.3884 8.5807 0.0001 42 1 2.6931 10.6938 -1.3060 43 1 4.1705 11.6980 -0.9749 44 1 5.0858 12.9027 0.8682 45 1 5.1200 15.2939 1.4424 46 1 0.8925 15.1616 2.1584 47 1 0.8796 12.7734 1.5708 48 1 5.0678 11.0845 1.4958 49 1 3.9666 9.8231 2.2009 50 1 1.3297 4.5114 0.0003 51 1 0.2124 2.3185 -0.0004 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15505404_4974302.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:16:55 Heat of formation + Delta-G solvation = -16.076557 kcal Electronic energy + Delta-G solvation = -34623.062369 eV Core-core repulsion = 29842.488050 eV Total energy + Delta-G solvation = -4780.574319 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.161 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.92306 -41.61459 -40.66259 -39.93002 -39.07193 -38.10689 -37.30471 -36.89608 -34.74006 -32.82912 -32.45315 -32.17077 -31.04514 -29.48010 -28.10132 -26.93132 -26.81377 -26.57734 -24.15309 -23.86542 -23.26896 -22.43550 -21.89693 -20.49432 -19.99079 -19.65333 -18.80152 -18.53633 -17.84192 -17.58381 -17.36143 -17.15793 -16.81758 -16.72548 -16.67308 -16.05236 -15.96651 -15.81029 -15.70209 -15.40805 -15.17970 -15.08419 -14.95485 -14.74070 -14.65045 -14.42504 -14.31888 -14.12944 -13.98903 -13.73108 -13.72362 -13.57521 -13.46152 -13.26465 -13.06355 -13.01661 -12.62548 -12.45502 -12.39791 -12.07520 -11.89450 -11.83305 -11.61489 -11.49747 -11.43911 -10.92336 -10.42229 -10.25696 -10.16664 -10.13096 -9.81722 -8.79545 -4.86705 -0.36572 0.05039 0.19301 0.37508 1.37608 1.38974 1.44303 1.67026 1.69720 1.87094 2.05178 2.24511 2.51367 2.55501 2.75396 2.84829 3.22233 3.37800 3.43538 3.48222 3.50342 3.64194 3.66367 3.67585 3.74433 3.75420 3.77357 3.88040 3.96850 4.01334 4.07068 4.11921 4.15282 4.15539 4.29383 4.33399 4.43900 4.49822 4.52616 4.59256 4.60371 4.64287 4.66614 4.68991 4.81754 4.85403 4.92002 5.02758 5.07274 5.12836 5.17446 5.19386 5.32255 5.40771 5.45133 5.65393 6.11953 6.28093 6.40247 6.50358 6.58383 7.05608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.099 3.901 4 C -0.116 4.116 5 C -0.105 4.105 6 C -0.063 4.063 7 O -0.518 6.518 8 Si 0.687 3.313 9 C 0.118 3.882 10 O -0.277 6.277 11 C 0.040 3.960 12 C 0.518 3.482 13 O -0.504 6.504 14 N -0.712 5.712 15 C 0.121 3.879 16 H 0.109 0.891 17 C -0.134 4.134 18 C -0.079 4.079 19 H 0.101 0.899 20 C -0.042 4.042 21 C -0.118 4.118 22 C -0.066 4.066 23 C -0.032 4.032 24 C 0.250 3.750 25 N -0.413 5.413 26 C -0.067 4.067 27 C -0.116 4.116 28 C -0.144 4.144 29 C -0.170 4.170 30 C -0.161 4.161 31 H 0.055 0.945 32 H 0.056 0.944 33 H 0.102 0.898 34 H 0.144 0.856 35 H 0.122 0.878 36 H 0.371 0.629 37 H -0.255 1.255 38 H -0.259 1.259 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.402 0.598 42 H 0.080 0.920 43 H 0.102 0.898 44 H 0.135 0.865 45 H 0.134 0.866 46 H 0.133 0.867 47 H 0.133 0.867 48 H 0.098 0.902 49 H 0.077 0.923 50 H 0.133 0.867 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.613 -4.121 -3.172 9.220 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.054 3.946 4 C -0.134 4.134 5 C -0.106 4.106 6 C -0.173 4.173 7 O -0.324 6.324 8 Si 0.588 3.412 9 C 0.072 3.928 10 O -0.189 6.189 11 C -0.040 4.040 12 C 0.303 3.697 13 O -0.377 6.377 14 N -0.366 5.366 15 C 0.016 3.984 16 H 0.127 0.873 17 C -0.172 4.172 18 C -0.098 4.098 19 H 0.120 0.880 20 C -0.042 4.042 21 C -0.136 4.136 22 C -0.086 4.086 23 C -0.036 4.036 24 C -0.066 4.066 25 N -0.088 5.088 26 C -0.087 4.087 27 C -0.134 4.134 28 C -0.182 4.182 29 C -0.189 4.189 30 C -0.180 4.180 31 H 0.074 0.926 32 H 0.075 0.925 33 H 0.121 0.879 34 H 0.162 0.838 35 H 0.139 0.861 36 H 0.218 0.782 37 H -0.180 1.180 38 H -0.184 1.184 39 H 0.110 0.890 40 H 0.111 0.889 41 H 0.237 0.763 42 H 0.098 0.902 43 H 0.120 0.880 44 H 0.153 0.847 45 H 0.152 0.848 46 H 0.151 0.849 47 H 0.151 0.849 48 H 0.117 0.883 49 H 0.096 0.904 50 H 0.151 0.849 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -5.641 -2.810 -2.839 6.912 hybrid contribution -1.504 0.168 1.182 1.920 sum -7.145 -2.642 -1.657 7.797 Atomic orbital electron populations 1.23095 0.78087 1.04343 1.01335 1.86110 1.21528 1.26307 1.88990 1.18776 0.91906 0.84511 0.99383 1.20261 0.91987 0.97323 1.03818 1.19392 0.96541 0.89882 1.04774 1.24894 0.90887 1.12791 0.88741 1.86709 1.78081 1.51375 1.16193 0.95035 0.80753 0.74756 0.90628 1.18619 0.90453 0.84898 0.98832 1.86249 1.33182 1.10749 1.88711 1.22437 0.93190 0.84488 1.03837 1.20030 0.88887 0.84074 0.76716 1.90810 1.14115 1.86359 1.46374 1.45471 1.10129 1.04620 1.76411 1.21917 0.96164 0.83272 0.97083 0.87348 1.23438 1.00871 0.97109 0.95775 1.21713 0.99747 0.91291 0.97022 0.88038 1.19955 0.93165 0.95226 0.95896 1.20979 0.98314 0.93543 1.00759 1.21209 0.96896 0.94653 0.95859 1.16021 0.95461 0.85679 1.06401 1.25748 0.94111 0.92788 0.93924 1.81307 1.06957 1.11898 1.08625 1.21213 0.96678 0.94155 0.96689 1.21007 0.98289 0.94114 1.00024 1.23637 0.98096 0.98565 0.97940 1.21055 0.92944 0.98654 1.06268 1.21088 1.00290 0.91538 1.05062 0.92648 0.92491 0.87950 0.83837 0.86051 0.78237 1.18012 1.18375 0.88974 0.88879 0.76336 0.90181 0.87990 0.84695 0.84808 0.84882 0.84915 0.88322 0.90422 0.84914 0.84781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.32 -0.31 10.50 -19.69 -0.21 -0.52 16 3 C 0.10 0.10 6.68 -39.24 -0.26 -0.17 16 4 C -0.12 -0.12 8.59 -39.45 -0.34 -0.46 16 5 C -0.10 -0.17 5.27 -104.49 -0.55 -0.72 16 6 C -0.06 -0.12 2.37 36.01 0.09 -0.04 16 7 O -0.52 -1.85 12.88 -35.23 -0.45 -2.31 16 8 Si 0.69 0.25 30.26 -169.99 -5.14 -4.89 16 9 C 0.12 0.17 6.66 -39.24 -0.26 -0.09 16 10 O -0.28 -0.68 9.00 -39.60 -0.36 -1.04 16 11 C 0.04 -0.07 5.22 36.01 0.19 0.12 16 12 C 0.52 0.21 7.91 -10.98 -0.09 0.12 16 13 O -0.50 -2.89 16.10 -14.35 -0.23 -3.12 16 14 N -0.71 2.27 5.26 -52.88 -0.28 1.99 16 15 C 0.12 -0.34 4.33 -66.97 -0.29 -0.63 16 16 H 0.11 -0.07 7.47 -51.93 -0.39 -0.46 16 17 C -0.13 0.62 7.29 -25.92 -0.19 0.43 16 18 C -0.08 0.37 3.85 -90.96 -0.35 0.02 16 19 H 0.10 -0.59 8.08 -51.93 -0.42 -1.01 16 20 C -0.04 0.14 5.30 -104.53 -0.55 -0.41 16 21 C -0.12 0.37 8.52 -39.64 -0.34 0.03 16 22 C -0.07 0.14 9.76 -39.17 -0.38 -0.24 16 23 C -0.03 0.03 5.73 -106.93 -0.61 -0.59 16 24 C 0.25 0.48 15.33 -22.48 -0.34 0.14 16 25 N -0.41 -2.02 18.54 41.83 0.78 -1.24 16 26 C -0.07 0.15 9.76 -39.17 -0.38 -0.23 16 27 C -0.12 0.38 9.69 -39.64 -0.38 0.00 16 28 C -0.14 0.48 7.27 -25.78 -0.19 0.29 16 29 C -0.17 0.13 9.03 -39.45 -0.36 -0.23 16 30 C -0.16 0.10 9.03 -39.45 -0.36 -0.26 16 31 H 0.05 -0.19 7.66 -51.93 -0.40 -0.59 16 32 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 33 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 34 H 0.14 0.04 4.86 -52.49 -0.26 -0.21 16 35 H 0.12 0.31 7.82 -51.93 -0.41 -0.10 16 36 H 0.37 0.08 8.70 45.56 0.40 0.47 16 37 H -0.26 -0.90 7.11 56.52 0.40 -0.50 16 38 H -0.26 -0.45 6.67 56.52 0.38 -0.08 16 39 H 0.09 -0.37 7.66 -51.93 -0.40 -0.77 16 40 H 0.09 -0.41 7.66 -51.93 -0.40 -0.81 16 41 H 0.40 -2.58 8.70 -40.82 -0.36 -2.93 16 42 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 43 H 0.10 -0.48 7.65 -51.93 -0.40 -0.88 16 44 H 0.14 -0.62 6.70 -52.49 -0.35 -0.97 16 45 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 46 H 0.13 -0.44 8.06 -52.49 -0.42 -0.87 16 47 H 0.13 -0.68 8.04 -52.49 -0.42 -1.11 16 48 H 0.10 -0.35 6.37 -51.93 -0.33 -0.68 16 49 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 50 H 0.13 -0.48 6.29 -52.48 -0.33 -0.81 16 51 H 0.13 -0.38 6.29 -52.49 -0.33 -0.71 16 LS Contribution 431.87 15.07 6.51 6.51 Total: 0.00 -12.45 431.87 -10.86 -23.32 By element: Atomic # 1 Polarization: -10.20 SS G_CDS: -6.52 Total: -16.72 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: -4.96 Total: -1.98 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: 0.50 Total: 0.74 kcal Atomic # 8 Polarization: -5.73 SS G_CDS: -1.25 Total: -6.98 kcal Atomic # 14 Polarization: 0.25 SS G_CDS: -5.14 Total: -4.89 kcal Total LS contribution 6.51 Total: 6.51 kcal Total: -12.45 -10.86 -23.32 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15505404_4974302.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.241 kcal (2) G-P(sol) polarization free energy of solvation -12.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.318 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.077 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds