Wall clock time and date at job start Tue Mar 9 2021 20:17:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39631 * 120.15404 * 118.27452 * 3 2 1 5 5 C 1.37946 * 119.84788 * 180.02562 * 4 3 2 6 6 C 1.38359 * 120.14992 * 359.97438 * 5 4 3 7 7 C 1.50702 * 119.84557 * 179.97438 * 6 5 4 8 8 H 1.08991 * 112.85113 * 11.19977 * 7 6 5 9 9 C 1.54058 * 113.61739 * 142.50493 * 7 6 5 10 10 C 1.53779 * 86.98421 * 139.98096 * 9 7 6 11 11 H 1.09005 * 113.61424 * 219.98162 * 10 9 7 12 12 N 1.46495 * 113.61921 * 89.16290 * 10 9 7 13 13 C 1.34776 * 120.00573 * 105.86022 * 12 10 9 14 14 O 1.21283 * 119.99401 * 359.97438 * 13 12 10 15 15 C 1.50696 * 120.00286 * 180.02562 * 13 12 10 16 16 N 1.46501 * 109.47112 * 180.02562 * 15 13 12 17 17 C 1.36835 * 125.05910 * 264.97428 * 16 15 13 18 18 C 1.34235 * 109.93739 * 180.02562 * 17 16 15 19 19 C 1.50705 * 126.50377 * 179.97438 * 18 17 16 20 20 O 1.42901 * 109.46913 * 105.02681 * 19 18 17 21 21 Si 1.86296 * 109.46774 * 345.02914 * 19 18 17 22 22 C 1.46493 * 106.99829 * 0.02562 * 18 17 16 23 23 C 1.39595 * 134.03477 * 180.02562 * 22 18 17 24 24 C 1.36657 * 119.76566 * 180.02562 * 23 22 18 25 25 C 1.38793 * 120.52724 * 359.97210 * 24 23 22 26 26 C 1.37789 * 120.66498 * 0.06304 * 25 24 23 27 27 C 1.37693 * 125.06570 * 85.01367 * 16 15 13 28 28 C 1.53779 * 87.17327 * 334.56805 * 10 9 7 29 29 C 1.38364 * 120.30866 * 0.27716 * 6 5 4 30 30 C 1.37949 * 120.14944 * 359.48657 * 29 6 5 31 31 H 1.07995 * 120.07146 * 0.04389 * 4 3 2 32 32 H 1.07995 * 119.92569 * 179.97438 * 5 4 3 33 33 H 1.09002 * 113.61406 * 25.47391 * 9 7 6 34 34 H 1.09002 * 113.69405 * 254.49171 * 9 7 6 35 35 H 0.96998 * 119.99816 * 285.86053 * 12 10 9 36 36 H 1.08998 * 109.47301 * 59.99937 * 15 13 12 37 37 H 1.09000 * 109.46797 * 300.00176 * 15 13 12 38 38 H 1.07997 * 125.03656 * 359.77167 * 17 16 15 39 39 H 1.08999 * 109.47175 * 225.02858 * 19 18 17 40 40 H 0.96701 * 113.99578 * 180.02562 * 20 19 18 41 41 H 1.48503 * 110.00013 * 298.67796 * 21 19 18 42 42 H 1.48508 * 110.00230 * 59.99735 * 21 19 18 43 43 H 1.07999 * 120.11572 * 359.96719 * 23 22 18 44 44 H 1.07995 * 119.73737 * 179.97438 * 24 23 22 45 45 H 1.07996 * 119.66699 * 180.02562 * 25 24 23 46 46 H 1.08008 * 120.11287 * 179.97438 * 26 25 24 47 47 H 1.09004 * 113.61377 * 140.02633 * 28 10 9 48 48 H 1.09002 * 113.61401 * 270.92664 * 28 10 9 49 49 H 1.08000 * 119.92737 * 179.73111 * 29 6 5 50 50 H 1.07997 * 120.07850 * 180.25737 * 30 29 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2692 0.5729 -1.0633 5 6 4.6486 0.5695 -1.0571 6 6 5.3374 0.0013 -0.0001 7 6 6.8444 0.0010 -0.0007 8 1 7.2676 0.6390 -0.7764 9 6 7.4621 0.2276 1.3923 10 6 8.5069 -0.8349 1.0124 11 1 8.7601 -1.5102 1.8298 12 7 9.6879 -0.2840 0.3433 13 6 10.8559 -0.1872 1.0088 14 8 10.9290 -0.5560 2.1619 15 6 12.0705 0.3801 0.3205 16 7 13.2037 0.3776 1.2491 17 6 13.5872 1.4381 2.0240 18 6 14.6600 1.1041 2.7584 19 6 15.3869 1.9893 3.7379 20 8 15.0572 1.5954 5.0714 21 14 14.8776 3.7611 3.4698 22 6 14.9911 -0.2837 2.4263 23 6 15.9795 -1.1736 2.8504 24 6 16.0210 -2.4381 2.3337 25 6 15.0876 -2.8452 1.3905 26 6 14.1041 -1.9829 0.9574 27 6 14.0418 -0.6920 1.4715 28 6 7.4601 -1.4075 0.0423 29 6 4.6490 -0.5721 1.0543 30 6 3.2696 -0.5714 1.0633 31 1 2.7327 1.0173 -1.8885 32 1 5.1922 1.0114 -1.8790 33 1 6.8111 -0.0739 2.2130 34 1 7.8824 1.2241 1.5282 35 1 9.6292 0.0113 -0.5788 36 1 11.8636 1.4017 0.0019 37 1 12.3130 -0.2298 -0.5497 38 1 13.1015 2.4026 2.0392 39 1 16.4619 1.8933 3.5859 40 1 15.4901 2.1237 5.7559 41 1 15.2438 4.1928 2.0969 42 1 13.4137 3.9053 3.6741 43 1 16.7094 -0.8636 3.5836 44 1 16.7861 -3.1260 2.6618 45 1 15.1331 -3.8478 0.9917 46 1 13.3825 -2.3089 0.2229 47 1 7.8787 -1.7303 -0.9110 48 1 6.8086 -2.1553 0.4945 49 1 5.1929 -1.0177 1.8740 50 1 2.7334 -1.0156 1.8889 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15505404_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:17:40 Heat of formation + Delta-G solvation = 93.149028 kcal Electronic energy + Delta-G solvation = -33624.968758 eV Core-core repulsion = 29164.617008 eV Total energy + Delta-G solvation = -4460.351750 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.157 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.53446 -41.75814 -40.54235 -39.21515 -37.95865 -37.51569 -37.31205 -34.83482 -34.11781 -32.46147 -32.18780 -31.32022 -30.20231 -29.07517 -26.99440 -26.98415 -25.63976 -24.07861 -23.79024 -23.43248 -22.69070 -21.82894 -20.56904 -20.43081 -20.01554 -18.78781 -18.23016 -18.14391 -17.72022 -17.42782 -16.88735 -16.65701 -16.40392 -16.35280 -15.83146 -15.74792 -15.49944 -15.22051 -15.06338 -14.88148 -14.83664 -14.71067 -14.67609 -14.48971 -14.36944 -14.19022 -14.04440 -13.78067 -13.74545 -13.51326 -13.50610 -13.26972 -13.05039 -12.65523 -12.49781 -12.47310 -12.37838 -12.11450 -11.95003 -11.92436 -11.66131 -11.48392 -11.15809 -10.45353 -10.32301 -10.19904 -10.11507 -9.84953 -9.05328 -8.56389 -4.98609 -0.39435 0.16413 0.24247 0.76601 1.31627 1.32663 1.34998 1.63517 1.67564 1.73136 1.84403 2.00294 2.00921 2.72709 2.82286 3.07157 3.17007 3.35031 3.37598 3.41622 3.49145 3.60997 3.65132 3.71527 3.72110 3.72714 3.78237 3.82933 3.92636 4.07762 4.12396 4.26191 4.29773 4.34226 4.38725 4.43306 4.47726 4.56880 4.60720 4.64722 4.68234 4.75462 4.75979 4.81678 4.86667 4.87836 4.96637 5.04150 5.14686 5.22781 5.27471 5.40412 5.61955 5.62416 5.77310 5.82759 5.86718 6.08702 6.25664 6.33608 6.48232 6.81600 6.94699 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.032 4.032 4 C -0.067 4.067 5 C -0.116 4.116 6 C -0.042 4.042 7 C -0.079 4.079 8 H 0.101 0.899 9 C -0.143 4.143 10 C 0.119 3.881 11 H 0.106 0.894 12 N -0.712 5.712 13 C 0.493 3.507 14 O -0.507 6.507 15 C 0.092 3.908 16 N -0.466 5.466 17 C 0.064 3.936 18 C -0.150 4.150 19 C -0.033 4.033 20 O -0.545 6.545 21 Si 0.682 3.318 22 C -0.085 4.085 23 C -0.063 4.063 24 C -0.145 4.145 25 C -0.095 4.095 26 C -0.127 4.127 27 C 0.109 3.891 28 C -0.133 4.133 29 C -0.118 4.118 30 C -0.066 4.066 31 H 0.134 0.866 32 H 0.133 0.867 33 H 0.098 0.902 34 H 0.076 0.924 35 H 0.402 0.598 36 H 0.121 0.879 37 H 0.120 0.880 38 H 0.162 0.838 39 H 0.070 0.930 40 H 0.378 0.622 41 H -0.256 1.256 42 H -0.254 1.254 43 H 0.123 0.877 44 H 0.124 0.876 45 H 0.126 0.874 46 H 0.115 0.885 47 H 0.079 0.921 48 H 0.102 0.898 49 H 0.135 0.865 50 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.159 2.663 -3.697 6.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.035 4.035 4 C -0.087 4.087 5 C -0.134 4.134 6 C -0.043 4.043 7 C -0.097 4.097 8 H 0.120 0.880 9 C -0.182 4.182 10 C 0.014 3.986 11 H 0.124 0.876 12 N -0.365 5.365 13 C 0.277 3.723 14 O -0.380 6.380 15 C -0.034 4.034 16 N -0.150 5.150 17 C -0.060 4.060 18 C -0.158 4.158 19 C -0.144 4.144 20 O -0.351 6.351 21 Si 0.583 3.417 22 C -0.089 4.089 23 C -0.082 4.082 24 C -0.164 4.164 25 C -0.115 4.115 26 C -0.148 4.148 27 C 0.005 3.995 28 C -0.171 4.171 29 C -0.136 4.136 30 C -0.086 4.086 31 H 0.152 0.848 32 H 0.151 0.849 33 H 0.117 0.883 34 H 0.094 0.906 35 H 0.237 0.763 36 H 0.139 0.861 37 H 0.138 0.862 38 H 0.179 0.821 39 H 0.088 0.912 40 H 0.224 0.776 41 H -0.181 1.181 42 H -0.179 1.179 43 H 0.141 0.859 44 H 0.142 0.858 45 H 0.144 0.856 46 H 0.133 0.867 47 H 0.098 0.902 48 H 0.120 0.880 49 H 0.153 0.847 50 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.337 2.533 -3.846 5.164 hybrid contribution 0.102 -0.300 -0.777 0.839 sum 2.440 2.233 -4.623 5.684 Atomic orbital electron populations 1.81313 1.12072 1.08090 1.07231 1.25744 0.92705 0.94043 0.94110 1.16023 0.84352 1.05152 0.97973 1.21214 0.94314 0.96458 0.96721 1.21004 0.93462 1.00270 0.98686 1.19944 0.95112 0.95443 0.93806 1.21749 0.90595 0.98250 0.99088 0.88034 1.23627 0.97617 1.00439 0.96498 1.21870 0.84055 0.96159 0.96549 0.87609 1.45617 1.09308 1.65252 1.16363 1.21009 0.84445 0.79283 0.87587 1.90838 1.84126 1.46457 1.16598 1.21579 0.84413 1.05024 0.92425 1.43146 1.24431 1.10420 1.36955 1.21394 0.96890 0.92268 0.95487 1.19539 0.99699 0.94071 1.02466 1.23938 1.00267 1.06600 0.83607 1.86574 1.72787 1.61726 1.13985 0.95257 0.82835 0.78379 0.85214 1.18929 0.97529 0.93607 0.98881 1.20285 0.96796 0.92598 0.98474 1.20674 1.00365 0.96318 0.99057 1.20833 0.94379 0.98951 0.97305 1.19952 1.01127 0.90715 1.03007 1.18164 0.92389 0.89627 0.99312 1.23423 0.97062 0.96234 1.00400 1.20979 0.93421 1.00318 0.98897 1.21213 0.94243 0.96438 0.96709 0.84840 0.84912 0.88344 0.90563 0.76305 0.86081 0.86229 0.82096 0.91230 0.77553 1.18052 1.17882 0.85873 0.85793 0.85617 0.86661 0.90190 0.88005 0.84743 0.84783 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.03 18.54 41.84 0.78 -1.26 16 2 C 0.25 0.49 15.33 -22.47 -0.34 0.15 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.14 9.76 -39.17 -0.38 -0.24 16 5 C -0.12 0.37 9.69 -39.64 -0.38 -0.01 16 6 C -0.04 0.14 5.30 -104.53 -0.55 -0.42 16 7 C -0.08 0.35 3.87 -90.81 -0.35 0.00 16 8 H 0.10 -0.57 8.09 -51.93 -0.42 -0.99 16 9 C -0.14 0.45 7.27 -25.77 -0.19 0.26 16 10 C 0.12 -0.31 4.29 -67.12 -0.29 -0.60 16 11 H 0.11 -0.02 7.50 -51.93 -0.39 -0.41 16 12 N -0.71 2.29 5.26 -53.02 -0.28 2.01 16 13 C 0.49 0.10 7.90 -10.99 -0.09 0.01 16 14 O -0.51 -2.90 16.04 5.55 0.09 -2.81 16 15 C 0.09 -0.17 6.48 -5.20 -0.03 -0.21 16 16 N -0.47 -1.18 2.27 -115.71 -0.26 -1.44 16 17 C 0.06 0.21 9.89 -16.73 -0.17 0.04 16 18 C -0.15 -0.64 5.61 -102.71 -0.58 -1.22 16 19 C -0.03 -0.05 3.05 36.01 0.11 0.06 16 20 O -0.55 -1.16 12.86 -35.23 -0.45 -1.62 16 21 Si 0.68 -0.45 30.79 -169.99 -5.23 -5.68 16 22 C -0.09 -0.44 6.35 -105.14 -0.67 -1.11 16 23 C -0.06 -0.24 10.05 -39.65 -0.40 -0.64 16 24 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 25 C -0.10 -0.22 10.01 -39.54 -0.40 -0.61 16 26 C -0.13 -0.36 10.00 -39.43 -0.39 -0.75 16 27 C 0.11 0.46 6.80 -83.99 -0.57 -0.11 16 28 C -0.13 0.59 7.28 -25.92 -0.19 0.40 16 29 C -0.12 0.35 8.57 -39.64 -0.34 0.01 16 30 C -0.07 0.13 9.76 -39.16 -0.38 -0.25 16 31 H 0.13 -0.44 8.06 -52.49 -0.42 -0.86 16 32 H 0.13 -0.67 8.05 -52.49 -0.42 -1.09 16 33 H 0.10 -0.32 6.32 -51.93 -0.33 -0.65 16 34 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.40 -2.59 8.70 -40.82 -0.36 -2.94 16 36 H 0.12 -0.60 8.12 -51.93 -0.42 -1.02 16 37 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 38 H 0.16 0.21 6.30 -52.49 -0.33 -0.12 16 39 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 40 H 0.38 -1.25 8.74 45.56 0.40 -0.86 16 41 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 42 H -0.25 -0.55 7.04 56.52 0.40 -0.16 16 43 H 0.12 0.29 8.06 -52.49 -0.42 -0.13 16 44 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 45 H 0.13 -0.01 8.06 -52.49 -0.42 -0.44 16 46 H 0.12 0.08 8.06 -52.48 -0.42 -0.35 16 47 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 48 H 0.10 -0.45 7.71 -51.93 -0.40 -0.85 16 49 H 0.13 -0.59 6.66 -52.49 -0.35 -0.93 16 50 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 LS Contribution 429.79 15.07 6.48 6.48 Total: 0.00 -13.72 429.79 -12.92 -26.64 By element: Atomic # 1 Polarization: -9.29 SS G_CDS: -6.44 Total: -15.73 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: -7.59 Total: -6.58 kcal Atomic # 7 Polarization: -0.92 SS G_CDS: 0.23 Total: -0.69 kcal Atomic # 8 Polarization: -4.06 SS G_CDS: -0.36 Total: -4.43 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.23 Total: -5.68 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -13.72 -12.92 -26.64 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15505404_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.784 kcal (2) G-P(sol) polarization free energy of solvation -13.717 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.635 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.149 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds