Wall clock time and date at job start Tue Mar 9 2021 20:19:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34712 * 117.00294 * 2 1 4 4 O 1.21472 * 119.99735 * 0.02562 * 3 2 1 5 5 C 1.47724 * 120.00056 * 179.97438 * 3 2 1 6 6 C 1.39607 * 120.14738 * 180.27132 * 5 3 2 7 7 C 1.37971 * 119.84313 * 180.29688 * 6 5 3 8 8 C 1.50704 * 119.92117 * 179.71179 * 7 6 5 9 9 H 1.08994 * 112.85173 * 348.53019 * 8 7 6 10 10 C 1.53780 * 113.61041 * 119.72774 * 8 7 6 11 11 C 1.53777 * 87.08078 * 139.97907 * 10 8 7 12 12 H 1.09007 * 113.61510 * 219.93319 * 11 10 8 13 13 N 1.46498 * 113.61842 * 89.11118 * 11 10 8 14 14 C 1.34781 * 120.00110 * 156.52920 * 13 11 10 15 15 O 1.21547 * 119.99914 * 0.02562 * 14 13 11 16 16 C 1.47853 * 119.99931 * 180.02562 * 14 13 11 17 17 C 1.39545 * 120.14002 * 0.02562 * 16 14 13 18 18 C 1.38068 * 119.84450 * 179.97438 * 17 16 14 19 19 Br 1.89096 * 119.93879 * 179.97438 * 18 17 16 20 20 C 1.38421 * 120.12391 * 359.97438 * 18 17 16 21 21 C 1.38364 * 120.28257 * 0.02562 * 20 18 17 22 22 C 1.50701 * 119.92547 * 180.02562 * 21 20 18 23 23 O 1.42902 * 109.47282 * 244.97790 * 22 21 20 24 24 Si 1.86300 * 109.46982 * 4.97619 * 22 21 20 25 25 C 1.37946 * 120.15601 * 359.97438 * 21 20 18 26 26 C 1.53781 * 87.17245 * 334.52048 * 11 10 8 27 27 C 1.38342 * 120.14937 * 359.43176 * 7 6 5 28 28 C 1.38388 * 120.30428 * 0.28170 * 27 7 6 29 29 C 1.37915 * 120.15268 * 0.02562 * 28 27 7 30 30 H 1.08998 * 109.47845 * 179.97438 * 1 2 3 31 31 H 1.08999 * 109.47518 * 300.00259 * 1 2 3 32 32 H 1.09003 * 109.47035 * 60.00052 * 1 2 3 33 33 H 1.07998 * 120.07921 * 0.02562 * 6 5 3 34 34 H 1.09002 * 113.61982 * 25.43041 * 10 8 7 35 35 H 1.08998 * 113.69085 * 254.53628 * 10 8 7 36 36 H 0.97004 * 119.99870 * 336.53523 * 13 11 10 37 37 H 1.08007 * 120.07404 * 359.69996 * 17 16 14 38 38 H 1.07998 * 119.85998 * 180.02562 * 20 18 17 39 39 H 1.08999 * 109.46959 * 124.97300 * 22 21 20 40 40 H 0.96698 * 114.00102 * 59.99461 * 23 22 21 41 41 H 1.48497 * 110.00173 * 180.02562 * 24 22 21 42 42 H 1.48499 * 110.00040 * 301.32021 * 24 22 21 43 43 H 1.08002 * 120.06378 * 180.02562 * 25 21 20 44 44 H 1.09005 * 113.61077 * 140.02481 * 26 11 10 45 45 H 1.09002 * 113.61880 * 270.92526 * 26 11 10 46 46 H 1.08004 * 119.84800 * 180.24827 * 27 7 6 47 47 H 1.08002 * 119.92117 * 179.97438 * 28 27 7 48 48 H 1.08001 * 120.07892 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0636 1.2003 0.0000 4 8 1.4020 2.2190 0.0005 5 6 3.5388 1.2775 0.0006 6 6 4.1759 2.5197 0.0063 7 6 5.5541 2.5846 0.0006 8 6 6.2435 3.9247 0.0002 9 1 5.5611 4.7518 -0.1951 10 6 7.1518 4.1504 1.2204 11 6 8.1497 4.8133 0.2563 12 1 9.1900 4.5627 0.4642 13 7 7.9342 6.2524 0.0866 14 6 8.9494 7.0432 -0.3142 15 8 10.0435 6.5623 -0.5353 16 6 8.7320 8.4957 -0.4849 17 6 7.4771 9.0509 -0.2313 18 6 7.2811 10.4081 -0.3921 19 35 5.5815 11.1632 -0.0499 20 6 8.3263 11.2171 -0.8035 21 6 9.5726 10.6720 -1.0564 22 6 10.7050 11.5603 -1.5032 23 8 11.0925 11.2060 -2.8323 24 14 10.1493 13.3382 -1.4716 25 6 9.7814 9.3175 -0.8994 26 6 7.5218 3.9607 -0.8589 27 6 6.3044 1.4223 0.0011 28 6 5.6793 0.1877 0.0014 29 6 4.3024 0.1082 0.0008 30 1 -0.3635 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 3.5913 3.4278 0.0107 34 1 7.5225 3.2271 1.6657 35 1 6.7338 4.8372 1.9564 36 1 7.0609 6.6362 0.2629 37 1 6.6600 8.4198 0.0858 38 1 8.1683 12.2782 -0.9275 39 1 11.5537 11.4329 -0.8311 40 1 10.3849 11.2953 -3.4853 41 1 11.2568 14.2245 -1.9108 42 1 8.9727 13.5184 -2.3595 43 1 10.7550 8.8937 -1.0968 44 1 7.4012 4.4949 -1.8014 45 1 7.9934 2.9857 -0.9812 46 1 7.3829 1.4788 0.0007 47 1 6.2711 -0.7158 0.0014 48 1 3.8159 -0.8559 0.0014 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15508394_12335870.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 20:19:19 Heat of formation + Delta-G solvation = -56.553343 kcal Electronic energy + Delta-G solvation = -33384.331509 eV Core-core repulsion = 28611.373652 eV Total energy + Delta-G solvation = -4772.957857 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 446.061 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -41.95683 -41.62621 -40.89082 -39.90277 -38.71675 -37.81566 -37.57203 -34.93082 -33.63652 -33.12104 -32.34166 -31.85972 -30.46970 -28.73947 -27.10086 -26.71509 -26.60487 -25.38357 -24.79661 -22.91501 -22.81182 -22.05315 -21.63071 -20.27810 -19.23501 -18.79220 -18.27427 -17.94129 -17.67684 -17.47567 -17.28455 -17.06523 -16.66422 -16.43022 -16.24065 -16.08075 -15.86290 -15.69436 -15.21730 -14.98408 -14.90471 -14.67341 -14.63070 -14.39654 -14.29268 -14.16819 -13.99766 -13.48715 -13.30414 -13.15528 -13.12983 -13.04242 -12.86461 -12.69295 -12.29603 -11.97130 -11.90650 -11.87239 -11.82334 -11.80334 -11.72649 -11.47466 -11.24573 -11.21682 -10.70948 -10.39807 -10.13283 -10.06156 -9.91828 -9.74456 -4.97684 -0.52687 -0.38477 -0.16940 0.30743 0.42741 1.20431 1.40802 1.50416 1.54126 1.61355 1.88370 1.95723 2.44833 2.68616 3.24452 3.31848 3.40819 3.45974 3.60388 3.61520 3.69155 3.79660 3.86204 3.88104 3.95408 3.95463 4.13005 4.13561 4.19476 4.22919 4.26617 4.28193 4.29131 4.41505 4.54708 4.63190 4.64155 4.74459 4.76441 4.78792 4.83657 4.91932 4.95228 4.97711 5.02457 5.07053 5.12658 5.17412 5.26269 5.35975 5.40218 5.44995 5.60681 5.84175 6.34447 6.41790 6.56097 7.02238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.358 6.358 3 C 0.505 3.495 4 O -0.540 6.540 5 C -0.147 4.147 6 C -0.062 4.062 7 C -0.082 4.082 8 C -0.069 4.069 9 H 0.106 0.894 10 C -0.123 4.123 11 C 0.114 3.886 12 H 0.094 0.906 13 N -0.695 5.695 14 C 0.564 3.436 15 O -0.569 6.569 16 C -0.136 4.136 17 C -0.044 4.044 18 C -0.099 4.099 19 Br -0.031 7.031 20 C -0.063 4.063 21 C -0.113 4.113 22 C -0.083 4.083 23 O -0.545 6.545 24 Si 0.761 3.239 25 C -0.027 4.027 26 C -0.141 4.141 27 C -0.077 4.077 28 C -0.128 4.128 29 C -0.068 4.068 30 H 0.134 0.866 31 H 0.062 0.938 32 H 0.061 0.939 33 H 0.130 0.870 34 H 0.110 0.890 35 H 0.088 0.912 36 H 0.413 0.587 37 H 0.161 0.839 38 H 0.155 0.845 39 H 0.132 0.868 40 H 0.388 0.612 41 H -0.297 1.297 42 H -0.274 1.274 43 H 0.133 0.867 44 H 0.066 0.934 45 H 0.107 0.893 46 H 0.154 0.846 47 H 0.158 0.842 48 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.839 -1.720 3.199 4.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.274 6.274 3 C 0.352 3.648 4 O -0.432 6.432 5 C -0.148 4.148 6 C -0.080 4.080 7 C -0.082 4.082 8 C -0.088 4.088 9 H 0.124 0.876 10 C -0.161 4.161 11 C 0.009 3.991 12 H 0.112 0.888 13 N -0.347 5.347 14 C 0.351 3.649 15 O -0.449 6.449 16 C -0.140 4.140 17 C -0.064 4.064 18 C -0.179 4.179 19 Br 0.055 6.945 20 C -0.082 4.082 21 C -0.114 4.114 22 C -0.191 4.191 23 O -0.353 6.353 24 Si 0.665 3.335 25 C -0.047 4.047 26 C -0.179 4.179 27 C -0.094 4.094 28 C -0.145 4.145 29 C -0.086 4.086 30 H 0.152 0.848 31 H 0.081 0.919 32 H 0.080 0.920 33 H 0.148 0.852 34 H 0.128 0.872 35 H 0.106 0.894 36 H 0.252 0.748 37 H 0.178 0.822 38 H 0.172 0.828 39 H 0.149 0.851 40 H 0.237 0.763 41 H -0.224 1.224 42 H -0.200 1.200 43 H 0.151 0.849 44 H 0.085 0.915 45 H 0.125 0.875 46 H 0.171 0.829 47 H 0.175 0.825 48 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -1.546 -0.925 3.020 3.517 hybrid contribution -0.627 -0.468 -1.257 1.481 sum -2.173 -1.392 1.764 3.126 Atomic orbital electron populations 1.23581 0.74317 1.05928 1.02588 1.86530 1.25188 1.31889 1.83789 1.21649 0.89946 0.81398 0.71765 1.90820 1.67661 1.37048 1.47625 1.19179 0.88195 0.96121 1.11330 1.21216 0.94773 0.96385 0.95656 1.19733 0.91993 0.96010 1.00510 1.21667 0.95407 0.93970 0.97712 0.87561 1.23405 0.94750 1.02053 0.95886 1.21925 1.00587 0.79026 0.97576 0.88823 1.45516 1.13590 1.07755 1.67811 1.18293 0.84033 0.86311 0.76220 1.90802 1.25928 1.76246 1.51877 1.19870 0.95008 0.92984 1.06112 1.21456 0.96438 0.93584 0.94961 1.21727 0.93374 0.95397 1.07385 1.96866 1.19453 1.83630 1.94532 1.21419 0.91034 1.00646 0.95105 1.20249 0.95217 0.94429 1.01532 1.25282 0.99742 1.08331 0.85771 1.86618 1.42103 1.89069 1.17529 0.94148 0.77089 0.72110 0.90139 1.21277 0.98948 0.92537 0.91911 1.23637 0.95432 1.01270 0.97593 1.21659 1.01651 0.91438 0.94672 1.21500 0.93901 0.99282 0.99852 1.21666 0.94702 0.97734 0.94507 0.84807 0.91881 0.91971 0.85244 0.87174 0.89375 0.74830 0.82188 0.82799 0.85066 0.76288 1.22443 1.19982 0.84897 0.91521 0.87525 0.82874 0.82484 0.83590 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.36 -1.57 9.82 -56.22 -0.55 -2.12 16 3 C 0.51 3.85 7.90 70.33 0.56 4.40 16 4 O -0.54 -7.06 16.14 19.93 0.32 -6.73 16 5 C -0.15 -0.53 5.87 -20.10 -0.12 -0.65 16 6 C -0.06 -0.11 9.25 22.54 0.21 0.10 16 7 C -0.08 0.23 5.28 -19.90 -0.11 0.13 16 8 C -0.07 0.41 3.87 -10.92 -0.04 0.37 16 9 H 0.11 -0.75 8.09 -2.39 -0.02 -0.77 16 10 C -0.12 0.92 7.29 31.12 0.23 1.15 16 11 C 0.11 -0.42 4.29 45.52 0.20 -0.22 16 12 H 0.09 0.00 7.50 -2.38 -0.02 -0.02 16 13 N -0.70 2.23 5.21 -442.90 -2.31 -0.08 16 14 C 0.56 1.85 7.77 86.79 0.67 2.53 16 15 O -0.57 -6.63 15.97 -3.86 -0.06 -6.69 16 16 C -0.14 -0.07 5.87 -20.09 -0.12 -0.19 16 17 C -0.04 0.16 9.28 22.54 0.21 0.37 16 18 C -0.10 0.26 6.22 22.27 0.14 0.40 16 19 Br -0.03 0.07 33.69 -20.37 -0.69 -0.61 16 20 C -0.06 0.19 8.40 22.34 0.19 0.38 16 21 C -0.11 0.17 5.35 -19.90 -0.11 0.06 16 22 C -0.08 0.16 2.80 71.24 0.20 0.36 16 23 O -0.54 -0.94 12.83 -148.98 -1.91 -2.85 16 24 Si 0.76 -2.71 29.87 68.60 2.05 -0.66 16 25 C -0.03 -0.05 9.23 22.53 0.21 0.16 16 26 C -0.14 0.66 7.27 31.21 0.23 0.89 16 27 C -0.08 0.38 8.60 22.33 0.19 0.57 16 28 C -0.13 0.56 10.03 22.23 0.22 0.79 16 29 C -0.07 0.05 9.62 22.54 0.22 0.27 16 30 H 0.13 -0.92 8.14 -2.39 -0.02 -0.94 16 31 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 32 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 33 H 0.13 0.31 7.65 -2.91 -0.02 0.29 16 34 H 0.11 -0.96 7.72 -2.39 -0.02 -0.98 16 35 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 36 H 0.41 -3.54 6.74 -92.71 -0.62 -4.17 16 37 H 0.16 -1.42 6.41 -2.91 -0.02 -1.43 16 38 H 0.15 -0.89 4.82 -2.91 -0.01 -0.91 16 39 H 0.13 -0.46 7.96 -2.39 -0.02 -0.47 16 40 H 0.39 -1.61 8.70 -74.06 -0.64 -2.25 16 41 H -0.30 -1.27 7.11 99.48 0.71 -0.56 16 42 H -0.27 0.16 7.01 99.48 0.70 0.86 16 43 H 0.13 0.63 7.65 -2.91 -0.02 0.61 16 44 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 45 H 0.11 -0.69 6.31 -2.39 -0.02 -0.71 16 46 H 0.15 -1.46 6.64 -2.91 -0.02 -1.48 16 47 H 0.16 -1.46 8.06 -2.91 -0.02 -1.48 16 48 H 0.15 -0.44 7.61 -2.91 -0.02 -0.46 16 Total: 0.00 -23.56 424.96 1.03 -22.53 By element: Atomic # 1 Polarization: -15.63 SS G_CDS: -0.19 Total: -15.83 kcal Atomic # 6 Polarization: 8.67 SS G_CDS: 4.37 Total: 13.04 kcal Atomic # 7 Polarization: 2.23 SS G_CDS: -2.31 Total: -0.08 kcal Atomic # 8 Polarization: -16.19 SS G_CDS: -2.20 Total: -18.40 kcal Atomic # 14 Polarization: -2.71 SS G_CDS: 2.05 Total: -0.66 kcal Atomic # 35 Polarization: 0.07 SS G_CDS: -0.69 Total: -0.61 kcal Total: -23.56 1.03 -22.53 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15508394_12335870.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.021 kcal (2) G-P(sol) polarization free energy of solvation -23.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.026 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.533 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds