Wall clock time and date at job start Tue Mar 9 2021 12:59:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35982 * 116.99888 * 2 1 4 4 C 1.38678 * 119.99969 * 180.02562 * 3 2 1 5 5 C 1.38153 * 119.99648 * 180.02562 * 4 3 2 6 6 C 1.50708 * 119.99808 * 180.02562 * 5 4 3 7 7 O 1.42906 * 109.46862 * 254.97748 * 6 5 4 8 8 Si 1.86300 * 109.46815 * 14.97481 * 6 5 4 9 9 C 1.38673 * 120.00594 * 359.97438 * 5 4 3 10 10 O 1.35977 * 120.00255 * 180.02562 * 9 5 4 11 11 C 1.42908 * 117.00021 * 180.02562 * 10 9 5 12 12 C 1.50699 * 109.47004 * 179.97438 * 11 10 9 13 13 O 1.21279 * 120.00406 * 359.97438 * 12 11 10 14 14 N 1.34780 * 119.99563 * 179.97438 * 12 11 10 15 15 C 1.46499 * 120.00229 * 0.02562 * 14 12 11 16 16 C 1.46499 * 119.99546 * 180.02562 * 14 12 11 17 17 H 1.08996 * 109.47508 * 0.02562 * 16 14 12 18 18 C 1.53002 * 109.47083 * 120.00689 * 16 14 12 19 19 C 1.52996 * 109.47078 * 179.97438 * 18 16 14 20 20 C 1.52995 * 109.47356 * 299.99916 * 19 18 16 21 21 H 1.09002 * 109.47028 * 179.97438 * 20 19 18 22 22 O 1.42898 * 109.47203 * 299.99934 * 20 19 18 23 23 C 1.52993 * 109.47353 * 60.00109 * 20 19 18 24 24 C 1.53006 * 109.46868 * 240.00135 * 16 14 12 25 25 C 1.38726 * 119.99705 * 0.27707 * 9 5 4 26 26 C 1.38116 * 119.99514 * 359.44677 * 25 9 5 27 27 H 1.08999 * 109.47408 * 60.00436 * 1 2 3 28 28 H 1.08997 * 109.46739 * 180.02562 * 1 2 3 29 29 H 1.09007 * 109.46888 * 299.99961 * 1 2 3 30 30 H 1.07992 * 120.00178 * 0.04003 * 4 3 2 31 31 H 1.08995 * 109.46909 * 134.97671 * 6 5 4 32 32 H 0.96696 * 113.99882 * 300.00265 * 7 6 5 33 33 H 1.48494 * 110.00362 * 298.68238 * 8 6 5 34 34 H 1.48501 * 110.00091 * 60.00548 * 8 6 5 35 35 H 1.09004 * 109.47206 * 59.99879 * 11 10 9 36 36 H 1.09002 * 109.47024 * 300.00067 * 11 10 9 37 37 H 1.09002 * 109.47391 * 89.99442 * 15 14 12 38 38 H 1.09001 * 109.46813 * 329.99499 * 15 14 12 39 39 H 1.09004 * 109.47041 * 209.99626 * 15 14 12 40 40 H 1.09001 * 109.46541 * 299.99577 * 18 16 14 41 41 H 1.08996 * 109.47255 * 59.99470 * 18 16 14 42 42 H 1.09003 * 109.47417 * 179.97438 * 19 18 16 43 43 H 1.09005 * 109.47048 * 59.99643 * 19 18 16 44 44 H 0.96702 * 113.99555 * 300.00041 * 22 20 19 45 45 H 1.09007 * 109.47587 * 180.02562 * 23 20 19 46 46 H 1.09005 * 109.47355 * 60.00086 * 23 20 19 47 47 H 1.08993 * 109.47519 * 299.99954 * 24 16 14 48 48 H 1.09007 * 109.47040 * 60.00609 * 24 16 14 49 49 H 1.07991 * 120.00009 * 179.70393 * 25 9 5 50 50 H 1.08003 * 119.99445 * 180.30062 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0583 2.5152 0.0000 6 6 5.5633 2.5942 -0.0012 7 8 6.0217 2.9667 1.3001 8 14 6.2719 0.9326 -0.4570 9 6 3.3031 3.6783 0.0005 10 8 3.9204 4.8898 0.0005 11 6 3.0804 6.0460 0.0017 12 6 3.9346 7.2875 0.0021 13 8 5.1436 7.1918 0.0020 14 7 3.3549 8.5042 0.0027 15 6 1.8944 8.6199 0.0034 16 6 4.1853 9.7111 0.0026 17 1 5.2378 9.4280 0.0015 18 6 3.8794 10.5405 -1.2463 19 6 4.7462 11.8012 -1.2461 20 6 4.4412 12.6297 0.0035 21 1 5.0591 13.5276 0.0038 22 8 3.0612 13.0005 0.0041 23 6 4.7470 11.8005 1.2523 24 6 3.8807 10.5398 1.2522 25 6 1.9177 3.6056 0.0063 26 6 1.2908 2.3750 0.0000 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5139 0.8901 30 1 4.0194 0.3786 -0.0016 31 1 5.8875 3.3392 -0.7277 32 1 5.6913 3.8235 1.6031 33 1 5.8633 -0.0857 0.5436 34 1 5.8026 0.5337 -1.8083 35 1 2.4518 6.0375 0.8922 36 1 2.4504 6.0382 -0.8878 37 1 1.5327 8.6482 1.0312 38 1 1.4618 7.7615 -0.5105 39 1 1.6023 9.5359 -0.5101 40 1 4.0964 9.9501 -2.1365 41 1 2.8269 10.8236 -1.2457 42 1 4.5287 12.3919 -2.1360 43 1 5.7989 11.5184 -1.2465 44 1 2.7958 13.5294 -0.7607 45 1 4.5293 12.3905 2.1427 46 1 5.7998 11.5176 1.2519 47 1 2.8282 10.8230 1.2528 48 1 4.0986 9.9490 2.1420 49 1 1.3296 4.5113 0.0116 50 1 0.2122 2.3185 -0.0003 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15557736_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:55 Heat of formation + Delta-G solvation = -155.571172 kcal Electronic energy + Delta-G solvation = -32195.672274 eV Core-core repulsion = 27769.611957 eV Total energy + Delta-G solvation = -4426.060317 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.00521 -41.37262 -40.25962 -39.56409 -38.19840 -37.14760 -36.95652 -35.00848 -32.95007 -31.87023 -31.43090 -30.52347 -28.92440 -28.07718 -27.75505 -26.65804 -24.24392 -23.78780 -23.06618 -22.50982 -20.86894 -20.30201 -19.70179 -18.97554 -18.35641 -18.09713 -17.86907 -17.63836 -17.45314 -17.33647 -16.78075 -16.51506 -16.16787 -15.95237 -15.70353 -15.64419 -15.45300 -15.29456 -14.67297 -14.50572 -14.23279 -14.15629 -14.07763 -13.97838 -13.64001 -13.53696 -13.38004 -13.26842 -13.18796 -13.09354 -12.99283 -12.62864 -12.40790 -12.36770 -12.23788 -12.08402 -11.57158 -11.48114 -11.33016 -11.25770 -11.14189 -10.97371 -10.68246 -10.26620 -9.76591 -8.96484 -4.87918 -0.09631 0.18539 1.29776 1.32717 1.36318 1.57843 1.88403 2.19743 2.35464 2.40157 3.23535 3.37980 3.42391 3.54697 3.66789 3.71688 3.79807 3.81363 3.94025 3.95015 3.96513 4.00649 4.05910 4.08713 4.17421 4.21313 4.24957 4.31797 4.32496 4.35256 4.44353 4.47578 4.53885 4.59630 4.63237 4.66726 4.81321 4.85527 4.91567 4.96367 4.98329 5.02420 5.04781 5.11310 5.12703 5.24813 5.26029 5.35545 5.45734 6.01680 6.20762 6.30333 6.50627 6.92016 6.95781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.089 3.911 4 C -0.141 4.141 5 C -0.118 4.118 6 C -0.087 4.087 7 O -0.544 6.544 8 Si 0.813 3.187 9 C 0.096 3.904 10 O -0.310 6.310 11 C 0.040 3.960 12 C 0.510 3.490 13 O -0.569 6.569 14 N -0.602 5.602 15 C 0.060 3.940 16 C 0.140 3.860 17 H 0.074 0.926 18 C -0.116 4.116 19 C -0.148 4.148 20 C 0.106 3.894 21 H 0.065 0.935 22 O -0.577 6.577 23 C -0.115 4.115 24 C -0.114 4.114 25 C -0.155 4.155 26 C -0.158 4.158 27 H 0.070 0.930 28 H 0.114 0.886 29 H 0.069 0.931 30 H 0.125 0.875 31 H 0.077 0.923 32 H 0.371 0.629 33 H -0.285 1.285 34 H -0.266 1.266 35 H 0.122 0.878 36 H 0.123 0.877 37 H 0.073 0.927 38 H 0.095 0.905 39 H 0.088 0.912 40 H 0.056 0.944 41 H 0.084 0.916 42 H 0.084 0.916 43 H 0.069 0.931 44 H 0.392 0.608 45 H 0.072 0.928 46 H 0.078 0.922 47 H 0.078 0.922 48 H 0.054 0.946 49 H 0.173 0.827 50 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.563 5.609 -2.490 9.739 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.255 6.255 3 C 0.044 3.956 4 C -0.160 4.160 5 C -0.119 4.119 6 C -0.194 4.194 7 O -0.350 6.350 8 Si 0.714 3.286 9 C 0.051 3.949 10 O -0.224 6.224 11 C -0.037 4.037 12 C 0.298 3.702 13 O -0.447 6.447 14 N -0.335 5.335 15 C -0.082 4.082 16 C 0.038 3.962 17 H 0.092 0.908 18 C -0.154 4.154 19 C -0.186 4.186 20 C 0.048 3.952 21 H 0.083 0.917 22 O -0.385 6.385 23 C -0.153 4.153 24 C -0.152 4.152 25 C -0.173 4.173 26 C -0.176 4.176 27 H 0.089 0.911 28 H 0.133 0.867 29 H 0.088 0.912 30 H 0.142 0.858 31 H 0.095 0.905 32 H 0.220 0.780 33 H -0.213 1.213 34 H -0.192 1.192 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.092 0.908 38 H 0.113 0.887 39 H 0.107 0.893 40 H 0.075 0.925 41 H 0.102 0.898 42 H 0.103 0.897 43 H 0.088 0.912 44 H 0.241 0.759 45 H 0.091 0.909 46 H 0.097 0.903 47 H 0.097 0.903 48 H 0.072 0.928 49 H 0.190 0.810 50 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -6.535 3.707 -2.191 7.826 hybrid contribution -1.521 1.370 -0.217 2.059 sum -8.056 5.078 -2.408 9.822 Atomic orbital electron populations 1.23394 0.75952 1.05741 1.02647 1.86081 1.23880 1.26594 1.88990 1.18980 0.91689 0.85637 0.99295 1.20156 0.92888 0.96845 1.06092 1.19559 0.96847 0.90560 1.04969 1.25417 0.91153 1.14304 0.88528 1.86650 1.73879 1.42264 1.32242 0.92480 0.89988 0.69684 0.76437 1.18715 0.91627 0.84245 1.00325 1.86092 1.35386 1.11670 1.89244 1.22770 0.92646 0.81883 1.06417 1.20511 0.88232 0.85267 0.76163 1.90743 1.16448 1.86935 1.50608 1.47885 1.08778 1.04391 1.72471 1.22205 0.76992 1.05234 1.03730 1.21124 0.95321 0.83631 0.96173 0.90824 1.21713 1.01749 0.95798 0.96131 1.22211 1.00546 0.96732 0.99117 1.21741 0.83012 0.96217 0.94273 0.91698 1.86472 1.25950 1.75371 1.50725 1.21555 1.00093 0.95706 0.97957 1.21669 1.01612 0.95582 0.96336 1.21452 0.92116 1.00028 1.03710 1.21433 1.01708 0.90624 1.03868 0.91104 0.86725 0.91211 0.85759 0.90475 0.78046 1.21273 1.19159 0.86012 0.85993 0.90850 0.88681 0.89305 0.92501 0.89780 0.89700 0.91181 0.75893 0.90948 0.90345 0.90308 0.92765 0.80980 0.81593 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.21 10.50 -93.35 -0.98 -3.19 16 3 C 0.09 0.61 6.69 22.49 0.15 0.76 16 4 C -0.14 -1.45 8.59 22.35 0.19 -1.26 16 5 C -0.12 -1.09 5.28 -19.78 -0.10 -1.20 16 6 C -0.09 -0.77 2.33 71.24 0.17 -0.61 16 7 O -0.54 -5.83 12.65 -148.98 -1.89 -7.71 16 8 Si 0.81 4.92 30.40 68.60 2.09 7.00 16 9 C 0.10 0.51 6.62 22.49 0.15 0.66 16 10 O -0.31 -1.76 8.56 -74.26 -0.64 -2.40 16 11 C 0.04 -0.09 3.77 71.24 0.27 0.17 16 12 C 0.51 2.09 7.75 87.66 0.68 2.76 16 13 O -0.57 -8.27 15.83 16.01 0.25 -8.02 16 14 N -0.60 0.77 2.76 -822.58 -2.27 -1.50 16 15 C 0.06 -0.56 9.30 127.77 1.19 0.63 16 16 C 0.14 0.08 2.52 44.99 0.11 0.19 16 17 H 0.07 0.48 6.90 -2.39 -0.02 0.47 16 18 C -0.12 0.32 5.04 30.59 0.15 0.48 16 19 C -0.15 0.64 5.64 30.59 0.17 0.81 16 20 C 0.11 -0.39 3.77 30.59 0.12 -0.28 16 21 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 22 O -0.58 1.97 11.97 -148.98 -1.78 0.18 16 23 C -0.12 0.17 5.66 30.58 0.17 0.34 16 24 C -0.11 0.07 5.06 30.58 0.15 0.22 16 25 C -0.15 0.11 9.03 22.36 0.20 0.31 16 26 C -0.16 -0.07 9.03 22.35 0.20 0.13 16 27 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 28 H 0.11 -0.69 8.14 -2.39 -0.02 -0.71 16 29 H 0.07 -0.42 7.66 -2.38 -0.02 -0.44 16 30 H 0.13 1.44 4.93 -2.91 -0.01 1.43 16 31 H 0.08 0.67 7.82 -2.39 -0.02 0.65 16 32 H 0.37 3.09 8.60 -74.06 -0.64 2.45 16 33 H -0.29 -3.26 6.81 99.48 0.68 -2.59 16 34 H -0.27 -2.23 7.11 99.48 0.71 -1.52 16 35 H 0.12 -1.00 7.61 -2.39 -0.02 -1.02 16 36 H 0.12 -1.04 6.93 -2.39 -0.02 -1.05 16 37 H 0.07 -0.79 8.14 -2.39 -0.02 -0.81 16 38 H 0.09 -1.34 6.44 -2.39 -0.02 -1.36 16 39 H 0.09 -0.90 6.43 -2.38 -0.02 -0.91 16 40 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 41 H 0.08 -0.39 6.20 -2.39 -0.01 -0.41 16 42 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 43 H 0.07 -0.20 8.14 -2.38 -0.02 -0.22 16 44 H 0.39 -4.10 9.08 -74.06 -0.67 -4.78 16 45 H 0.07 -0.06 8.14 -2.38 -0.02 -0.08 16 46 H 0.08 -0.12 8.14 -2.38 -0.02 -0.14 16 47 H 0.08 -0.08 7.21 -2.39 -0.02 -0.09 16 48 H 0.05 0.08 8.14 -2.38 -0.02 0.06 16 49 H 0.17 -1.58 6.29 -2.92 -0.02 -1.60 16 50 H 0.17 -1.03 6.29 -2.91 -0.02 -1.05 16 Total: 0.00 -25.16 391.82 -0.45 -25.61 By element: Atomic # 1 Polarization: -14.85 SS G_CDS: -0.32 Total: -15.17 kcal Atomic # 6 Polarization: 0.11 SS G_CDS: 5.09 Total: 5.20 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -2.27 Total: -1.50 kcal Atomic # 8 Polarization: -16.11 SS G_CDS: -5.03 Total: -21.14 kcal Atomic # 14 Polarization: 4.92 SS G_CDS: 2.09 Total: 7.00 kcal Total: -25.16 -0.45 -25.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15557736_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.961 kcal (2) G-P(sol) polarization free energy of solvation -25.161 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.123 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.448 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.610 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds