Wall clock time and date at job start Tue Mar 9 2021 13:03:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.47543 * 2 1 4 4 C 1.50699 * 109.46856 * 120.00116 * 2 1 3 5 5 C 1.38240 * 119.94149 * 245.01704 * 4 2 1 6 6 C 1.38182 * 120.07264 * 179.97438 * 5 4 2 7 7 C 1.38680 * 119.95546 * 0.02562 * 6 5 4 8 8 O 1.35922 * 120.05685 * 179.97438 * 7 6 5 9 9 C 1.42900 * 117.00265 * 359.97438 * 8 7 6 10 10 C 1.50695 * 109.47127 * 180.02562 * 9 8 7 11 11 O 1.21282 * 120.00157 * 359.97438 * 10 9 8 12 12 N 1.34780 * 120.00040 * 180.02562 * 10 9 8 13 13 C 1.46494 * 120.00035 * 179.97438 * 12 10 9 14 14 H 1.09007 * 112.85108 * 334.67100 * 13 12 10 15 15 C 1.53778 * 113.61512 * 105.86406 * 13 12 10 16 16 C 1.54046 * 86.98666 * 89.16297 * 15 13 12 17 17 H 1.09000 * 113.61284 * 270.88785 * 16 15 13 18 18 N 1.46501 * 113.62125 * 139.98239 * 16 15 13 19 19 C 1.36881 * 126.39866 * 142.22287 * 18 16 15 20 20 C 1.34668 * 106.81891 * 179.84148 * 19 18 16 21 21 N 1.34136 * 108.01784 * 0.41998 * 20 19 18 22 22 C 1.30502 * 109.25619 * 359.72961 * 21 20 19 23 23 C 1.53781 * 113.61486 * 203.47227 * 13 12 10 24 24 C 1.38827 * 119.88122 * 359.71855 * 7 6 5 25 25 Br 1.89103 * 120.03647 * 180.27563 * 24 7 6 26 26 C 1.38195 * 119.92913 * 0.53452 * 24 7 6 27 27 H 0.96701 * 114.00402 * 300.00275 * 1 2 3 28 28 H 1.09000 * 109.46922 * 239.99803 * 2 1 3 29 29 H 1.48499 * 109.99582 * 300.00011 * 3 2 1 30 30 H 1.48498 * 109.99892 * 61.31604 * 3 2 1 31 31 H 1.08003 * 119.96067 * 359.97438 * 5 4 2 32 32 H 1.08007 * 120.02338 * 179.97438 * 6 5 4 33 33 H 1.09000 * 109.46847 * 300.00557 * 9 8 7 34 34 H 1.09004 * 109.46672 * 60.00204 * 9 8 7 35 35 H 0.96999 * 119.99527 * 0.02562 * 12 10 9 36 36 H 1.09002 * 113.61709 * 203.66814 * 15 13 12 37 37 H 1.09000 * 113.61329 * 334.56380 * 15 13 12 38 38 H 1.08002 * 126.59209 * 359.96952 * 19 18 16 39 39 H 1.08000 * 125.99456 * 180.11418 * 20 19 18 40 40 H 1.07996 * 125.64739 * 180.02562 * 22 21 20 41 41 H 1.08997 * 113.61809 * 25.43429 * 23 13 12 42 42 H 1.08997 * 113.61492 * 156.33884 * 23 13 12 43 43 H 1.08002 * 119.98188 * 179.77172 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.6382 -0.0111 2.1907 6 6 3.0995 -0.6597 3.3203 7 6 2.8534 -2.0138 3.4903 8 8 3.3067 -2.6540 4.6004 9 6 4.0304 -1.8703 5.5513 10 6 4.4504 -2.7431 6.7057 11 8 4.1585 -3.9202 6.7137 12 7 5.1498 -2.2153 7.7299 13 6 5.5576 -3.0636 8.8525 14 1 4.9102 -3.9305 8.9850 15 6 7.0562 -3.4085 8.8512 16 6 7.2693 -2.1243 9.6750 17 1 7.4338 -1.2363 9.0647 18 7 8.2581 -2.2713 10.7460 19 6 9.1692 -1.3308 11.1450 20 6 9.8746 -1.8754 12.1546 21 7 9.4131 -3.1179 12.3603 22 6 8.4447 -3.3619 11.5202 23 6 5.8161 -2.2833 10.1522 24 6 2.1387 -2.7132 2.5274 25 35 1.7938 -4.5581 2.7585 26 6 1.6841 -2.0609 1.3971 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5139 -0.8900 29 1 1.5616 2.4678 -1.2085 30 1 1.5880 2.4585 1.2242 31 1 2.8301 1.0434 2.0579 32 1 3.6522 -0.1126 4.0698 33 1 4.9150 -1.4472 5.0753 34 1 3.3941 -1.0645 5.9172 35 1 5.3823 -1.2736 7.7241 36 1 7.2946 -4.3216 9.3966 37 1 7.5113 -3.3745 7.8613 38 1 9.2964 -0.3414 10.7311 39 1 10.6751 -1.3974 12.6997 40 1 7.8851 -4.2833 11.4551 41 1 5.2706 -1.3415 10.2119 42 1 5.7161 -2.8893 11.0525 43 1 1.1311 -2.6049 0.6456 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15608530_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:50 Heat of formation + Delta-G solvation = 38.651722 kcal Electronic energy + Delta-G solvation = -28597.808726 eV Core-core repulsion = 24273.261921 eV Total energy + Delta-G solvation = -4324.546804 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.052 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -43.18632 -41.87348 -41.19322 -39.81596 -38.96927 -37.41152 -35.12661 -33.68293 -33.07033 -32.07232 -30.61074 -30.31501 -29.72460 -27.27793 -26.62525 -26.09491 -24.23262 -22.84744 -22.44958 -22.24616 -21.96468 -20.59473 -19.79135 -18.93203 -18.62846 -18.23457 -17.72970 -17.35049 -17.19957 -16.58066 -16.34599 -16.28254 -15.88338 -15.84891 -15.72230 -15.26845 -15.13739 -14.91669 -14.70406 -14.54907 -14.51558 -14.18693 -13.98605 -13.93173 -13.72764 -13.67677 -13.27294 -12.51532 -12.43724 -12.34741 -12.32189 -12.00773 -11.87854 -11.80599 -11.14977 -11.12681 -10.90540 -10.70283 -10.57148 -10.49034 -10.04474 -9.46780 -9.42145 -5.09830 -0.16303 -0.00746 0.65715 1.04134 1.10532 1.16310 1.23906 1.44448 1.70336 1.85133 2.20652 2.26093 2.27070 2.84110 3.01954 3.15885 3.24181 3.31213 3.37329 3.43584 3.49754 3.55046 3.66448 3.69895 3.75193 3.80537 3.95293 4.13367 4.14933 4.20904 4.23231 4.39699 4.41941 4.49621 4.50956 4.53580 4.57180 4.69639 4.76281 4.83590 5.07635 5.09960 5.29300 5.32677 5.79883 5.84710 6.05407 6.19224 6.29295 6.83941 7.15126 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.071 4.071 3 Si 0.686 3.314 4 C -0.149 4.149 5 C -0.062 4.062 6 C -0.201 4.201 7 C 0.160 3.840 8 O -0.274 6.274 9 C 0.037 3.963 10 C 0.520 3.480 11 O -0.499 6.499 12 N -0.714 5.714 13 C 0.128 3.872 14 H 0.118 0.882 15 C -0.155 4.155 16 C 0.108 3.892 17 H 0.122 0.878 18 N -0.450 5.450 19 C -0.058 4.058 20 C -0.029 4.029 21 N -0.493 5.493 22 C 0.182 3.818 23 C -0.150 4.150 24 C -0.122 4.122 25 Br -0.024 7.024 26 C -0.023 4.023 27 H 0.376 0.624 28 H 0.121 0.879 29 H -0.255 1.255 30 H -0.259 1.259 31 H 0.137 0.863 32 H 0.140 0.860 33 H 0.099 0.901 34 H 0.099 0.901 35 H 0.403 0.597 36 H 0.105 0.895 37 H 0.087 0.913 38 H 0.173 0.827 39 H 0.170 0.830 40 H 0.202 0.798 41 H 0.088 0.912 42 H 0.109 0.891 43 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.772 7.567 -1.100 7.849 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.181 4.181 3 Si 0.587 3.413 4 C -0.150 4.150 5 C -0.080 4.080 6 C -0.220 4.220 7 C 0.112 3.888 8 O -0.185 6.185 9 C -0.041 4.041 10 C 0.304 3.696 11 O -0.371 6.371 12 N -0.369 5.369 13 C 0.022 3.978 14 H 0.136 0.864 15 C -0.195 4.195 16 C 0.004 3.996 17 H 0.140 0.860 18 N -0.133 5.133 19 C -0.191 4.191 20 C -0.176 4.176 21 N -0.210 5.210 22 C -0.100 4.100 23 C -0.189 4.189 24 C -0.202 4.202 25 Br 0.062 6.938 26 C -0.043 4.043 27 H 0.224 0.776 28 H 0.139 0.861 29 H -0.180 1.180 30 H -0.185 1.185 31 H 0.154 0.846 32 H 0.158 0.842 33 H 0.117 0.883 34 H 0.116 0.884 35 H 0.238 0.762 36 H 0.123 0.877 37 H 0.106 0.894 38 H 0.190 0.810 39 H 0.187 0.813 40 H 0.219 0.781 41 H 0.107 0.893 42 H 0.127 0.873 43 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 1.470 5.772 -1.026 6.044 hybrid contribution -0.991 1.620 -0.051 1.900 sum 0.479 7.392 -1.078 7.486 Atomic orbital electron populations 1.86628 1.17550 1.79895 1.49328 1.24997 0.84071 1.10931 0.98078 0.95078 0.91484 0.74293 0.80417 1.20216 1.02440 0.94277 0.98113 1.20983 0.94844 0.99771 0.92391 1.21152 1.06961 0.92780 1.01111 1.18625 0.93103 0.90705 0.86377 1.86286 1.68009 1.36023 1.28209 1.22524 0.98086 0.94046 0.89475 1.19979 0.78143 0.88543 0.82921 1.90832 1.52686 1.15969 1.77602 1.45474 1.57438 1.13157 1.20797 1.21654 0.95856 0.95103 0.85179 0.86359 1.23978 0.96443 0.97492 1.01567 1.23235 0.87237 1.00888 0.88257 0.85992 1.45558 1.27106 1.13182 1.27481 1.22776 0.96455 0.97025 1.02796 1.22382 1.03195 0.92364 0.99698 1.70353 1.10744 1.16393 1.23543 1.24906 0.99596 0.93373 0.92131 1.23854 0.94267 1.02487 0.98299 1.21167 1.07793 0.93264 0.98025 1.96823 1.94577 1.04887 1.97547 1.20907 0.95167 0.93611 0.94624 0.77590 0.86137 1.17981 1.18451 0.84559 0.84187 0.88282 0.88364 0.76213 0.87654 0.89408 0.80950 0.81299 0.78126 0.89317 0.87303 0.83781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.06 12.83 -35.23 -0.45 -0.51 16 2 C -0.07 0.12 2.80 36.01 0.10 0.22 16 3 Si 0.69 -1.77 29.88 -169.99 -5.08 -6.85 16 4 C -0.15 0.19 5.35 -104.60 -0.56 -0.37 16 5 C -0.06 0.15 8.66 -39.60 -0.34 -0.19 16 6 C -0.20 0.48 9.04 -39.44 -0.36 0.13 16 7 C 0.16 0.06 6.68 -39.20 -0.26 -0.21 16 8 O -0.27 -0.29 9.01 -39.41 -0.35 -0.65 16 9 C 0.04 -0.13 5.22 36.00 0.19 0.06 16 10 C 0.52 -0.63 7.91 -10.99 -0.09 -0.71 16 11 O -0.50 -2.05 16.12 -14.35 -0.23 -2.28 16 12 N -0.71 3.36 5.26 -53.02 -0.28 3.08 16 13 C 0.13 -0.51 4.29 -67.12 -0.29 -0.80 16 14 H 0.12 -0.24 7.50 -51.92 -0.39 -0.63 16 15 C -0.16 0.62 7.45 -25.78 -0.19 0.42 16 16 C 0.11 -0.48 4.53 -66.98 -0.30 -0.78 16 17 H 0.12 -0.76 8.14 -51.93 -0.42 -1.19 16 18 N -0.45 0.56 2.94 -110.44 -0.33 0.24 16 19 C -0.06 0.03 11.58 -16.56 -0.19 -0.17 16 20 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 21 N -0.49 -1.90 11.25 -14.66 -0.16 -2.06 16 22 C 0.18 0.12 11.38 -90.37 -1.03 -0.91 16 23 C -0.15 0.76 7.50 -25.92 -0.19 0.56 16 24 C -0.12 -0.19 6.24 -39.38 -0.25 -0.43 16 25 Br -0.02 -0.07 33.16 -68.01 -2.26 -2.33 16 26 C -0.02 -0.01 9.42 -39.58 -0.37 -0.38 16 27 H 0.38 -1.02 8.70 45.56 0.40 -0.63 16 28 H 0.12 -0.27 7.96 -51.93 -0.41 -0.69 16 29 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 30 H -0.26 0.27 7.01 56.52 0.40 0.67 16 31 H 0.14 -0.62 4.83 -52.48 -0.25 -0.87 16 32 H 0.14 -0.79 6.30 -52.48 -0.33 -1.12 16 33 H 0.10 -0.62 7.66 -51.93 -0.40 -1.02 16 34 H 0.10 -0.59 7.66 -51.93 -0.40 -0.99 16 35 H 0.40 -3.23 8.70 -40.82 -0.36 -3.59 16 36 H 0.11 -0.40 6.93 -51.93 -0.36 -0.76 16 37 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 38 H 0.17 -0.59 8.06 -52.49 -0.42 -1.01 16 39 H 0.17 0.02 8.06 -52.49 -0.42 -0.40 16 40 H 0.20 -0.46 7.44 -52.49 -0.39 -0.85 16 41 H 0.09 -0.51 8.14 -51.93 -0.42 -0.93 16 42 H 0.11 -0.48 7.90 -51.93 -0.41 -0.89 16 43 H 0.14 -0.01 8.06 -52.49 -0.42 -0.43 16 LS Contribution 384.67 15.07 5.80 5.80 Total: 0.00 -12.59 384.67 -12.73 -25.32 By element: Atomic # 1 Polarization: -10.89 SS G_CDS: -5.04 Total: -15.94 kcal Atomic # 6 Polarization: 0.53 SS G_CDS: -4.35 Total: -3.82 kcal Atomic # 7 Polarization: 2.02 SS G_CDS: -0.77 Total: 1.25 kcal Atomic # 8 Polarization: -2.40 SS G_CDS: -1.04 Total: -3.44 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.08 Total: -6.85 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.26 Total: -2.33 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -12.59 -12.73 -25.32 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.973 kcal (2) G-P(sol) polarization free energy of solvation -12.587 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.386 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.734 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.321 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.652 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds