Wall clock time and date at job start Tue Mar 9 2021 13:03:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.47543 * 2 1 4 4 C 1.50699 * 109.46856 * 120.00116 * 2 1 3 5 5 C 1.38240 * 119.94149 * 245.01704 * 4 2 1 6 6 C 1.38182 * 120.07264 * 179.97438 * 5 4 2 7 7 C 1.38680 * 119.95546 * 0.02562 * 6 5 4 8 8 O 1.35922 * 120.05685 * 179.97438 * 7 6 5 9 9 C 1.42900 * 117.00265 * 359.97438 * 8 7 6 10 10 C 1.50695 * 109.47127 * 180.02562 * 9 8 7 11 11 O 1.21282 * 120.00157 * 359.97438 * 10 9 8 12 12 N 1.34780 * 120.00040 * 180.02562 * 10 9 8 13 13 C 1.46494 * 120.00035 * 179.97438 * 12 10 9 14 14 H 1.09007 * 112.85108 * 334.67100 * 13 12 10 15 15 C 1.53778 * 113.61512 * 105.86406 * 13 12 10 16 16 C 1.54046 * 86.98666 * 89.16297 * 15 13 12 17 17 H 1.09000 * 113.61284 * 270.88785 * 16 15 13 18 18 N 1.46501 * 113.62125 * 139.98239 * 16 15 13 19 19 C 1.36881 * 126.39866 * 142.22287 * 18 16 15 20 20 C 1.34668 * 106.81891 * 179.84148 * 19 18 16 21 21 N 1.34136 * 108.01784 * 0.41998 * 20 19 18 22 22 C 1.30502 * 109.25619 * 359.72961 * 21 20 19 23 23 C 1.53781 * 113.61486 * 203.47227 * 13 12 10 24 24 C 1.38827 * 119.88122 * 359.71855 * 7 6 5 25 25 Br 1.89103 * 120.03647 * 180.27563 * 24 7 6 26 26 C 1.38195 * 119.92913 * 0.53452 * 24 7 6 27 27 H 0.96701 * 114.00402 * 300.00275 * 1 2 3 28 28 H 1.09000 * 109.46922 * 239.99803 * 2 1 3 29 29 H 1.48499 * 109.99582 * 300.00011 * 3 2 1 30 30 H 1.48498 * 109.99892 * 61.31604 * 3 2 1 31 31 H 1.08003 * 119.96067 * 359.97438 * 5 4 2 32 32 H 1.08007 * 120.02338 * 179.97438 * 6 5 4 33 33 H 1.09000 * 109.46847 * 300.00557 * 9 8 7 34 34 H 1.09004 * 109.46672 * 60.00204 * 9 8 7 35 35 H 0.96999 * 119.99527 * 0.02562 * 12 10 9 36 36 H 1.09002 * 113.61709 * 203.66814 * 15 13 12 37 37 H 1.09000 * 113.61329 * 334.56380 * 15 13 12 38 38 H 1.08002 * 126.59209 * 359.96952 * 19 18 16 39 39 H 1.08000 * 125.99456 * 180.11418 * 20 19 18 40 40 H 1.07996 * 125.64739 * 180.02562 * 22 21 20 41 41 H 1.08997 * 113.61809 * 25.43429 * 23 13 12 42 42 H 1.08997 * 113.61492 * 156.33884 * 23 13 12 43 43 H 1.08002 * 119.98188 * 179.77172 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.6382 -0.0111 2.1907 6 6 3.0995 -0.6597 3.3203 7 6 2.8534 -2.0138 3.4903 8 8 3.3067 -2.6540 4.6004 9 6 4.0304 -1.8703 5.5513 10 6 4.4504 -2.7431 6.7057 11 8 4.1585 -3.9202 6.7137 12 7 5.1498 -2.2153 7.7299 13 6 5.5576 -3.0636 8.8525 14 1 4.9102 -3.9305 8.9850 15 6 7.0562 -3.4085 8.8512 16 6 7.2693 -2.1243 9.6750 17 1 7.4338 -1.2363 9.0647 18 7 8.2581 -2.2713 10.7460 19 6 9.1692 -1.3308 11.1450 20 6 9.8746 -1.8754 12.1546 21 7 9.4131 -3.1179 12.3603 22 6 8.4447 -3.3619 11.5202 23 6 5.8161 -2.2833 10.1522 24 6 2.1387 -2.7132 2.5274 25 35 1.7938 -4.5581 2.7585 26 6 1.6841 -2.0609 1.3971 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5139 -0.8900 29 1 1.5616 2.4678 -1.2085 30 1 1.5880 2.4585 1.2242 31 1 2.8301 1.0434 2.0579 32 1 3.6522 -0.1126 4.0698 33 1 4.9150 -1.4472 5.0753 34 1 3.3941 -1.0645 5.9172 35 1 5.3823 -1.2736 7.7241 36 1 7.2946 -4.3216 9.3966 37 1 7.5113 -3.3745 7.8613 38 1 9.2964 -0.3414 10.7311 39 1 10.6751 -1.3974 12.6997 40 1 7.8851 -4.2833 11.4551 41 1 5.2706 -1.3415 10.2119 42 1 5.7161 -2.8893 11.0525 43 1 1.1311 -2.6049 0.6456 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608530_6201210.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:49 Heat of formation + Delta-G solvation = 36.846318 kcal Electronic energy + Delta-G solvation = -28597.887014 eV Core-core repulsion = 24273.261921 eV Total energy + Delta-G solvation = -4324.625093 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.052 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -43.10063 -41.72196 -41.02173 -39.64629 -38.86071 -37.32772 -34.98298 -33.61931 -32.97937 -31.92970 -30.54824 -30.28142 -29.52906 -26.93887 -26.47567 -25.87279 -24.08125 -22.72423 -22.34252 -22.15198 -21.80844 -20.39715 -19.60932 -18.72992 -18.50794 -18.07297 -17.49957 -17.15948 -17.00313 -16.42733 -16.22597 -16.15860 -15.70711 -15.67958 -15.62236 -15.15067 -15.00398 -14.72816 -14.60952 -14.48846 -14.41550 -13.98377 -13.80168 -13.67490 -13.60901 -13.54562 -13.05205 -12.40552 -12.21064 -12.19998 -12.11458 -11.88576 -11.70085 -11.68948 -11.23622 -11.05659 -10.93445 -10.59934 -10.49470 -10.26415 -9.96446 -9.44152 -9.32963 -4.89083 -0.04969 0.12330 0.64643 1.11244 1.33268 1.36781 1.41956 1.61666 1.87512 2.01895 2.22674 2.39472 2.45651 3.17420 3.33493 3.41056 3.46122 3.60581 3.64254 3.75239 3.76612 3.82583 3.86447 3.99892 4.04277 4.10314 4.12450 4.33173 4.40824 4.44707 4.56997 4.58144 4.63076 4.65039 4.73261 4.82258 4.85110 4.85608 4.89871 5.00605 5.24186 5.30190 5.43576 5.49160 5.84635 6.06292 6.29433 6.40830 6.50859 7.11064 7.16323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.086 4.086 3 Si 0.779 3.221 4 C -0.149 4.149 5 C -0.056 4.056 6 C -0.188 4.188 7 C 0.150 3.850 8 O -0.306 6.306 9 C 0.031 3.969 10 C 0.516 3.484 11 O -0.565 6.565 12 N -0.693 5.693 13 C 0.127 3.873 14 H 0.093 0.907 15 C -0.156 4.156 16 C 0.111 3.889 17 H 0.152 0.848 18 N -0.445 5.445 19 C -0.044 4.044 20 C -0.068 4.068 21 N -0.544 5.544 22 C 0.172 3.828 23 C -0.138 4.138 24 C -0.145 4.145 25 Br -0.056 7.056 26 C -0.036 4.036 27 H 0.387 0.613 28 H 0.121 0.879 29 H -0.310 1.310 30 H -0.269 1.269 31 H 0.164 0.836 32 H 0.182 0.818 33 H 0.136 0.864 34 H 0.133 0.867 35 H 0.424 0.576 36 H 0.099 0.901 37 H 0.084 0.916 38 H 0.206 0.794 39 H 0.173 0.827 40 H 0.219 0.781 41 H 0.106 0.894 42 H 0.101 0.899 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.500 11.007 -1.089 11.340 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.194 4.194 3 Si 0.683 3.317 4 C -0.151 4.151 5 C -0.074 4.074 6 C -0.207 4.207 7 C 0.102 3.898 8 O -0.218 6.218 9 C -0.046 4.046 10 C 0.303 3.697 11 O -0.442 6.442 12 N -0.348 5.348 13 C 0.020 3.980 14 H 0.112 0.888 15 C -0.195 4.195 16 C 0.009 3.991 17 H 0.170 0.830 18 N -0.127 5.127 19 C -0.178 4.178 20 C -0.214 4.214 21 N -0.262 5.262 22 C -0.110 4.110 23 C -0.176 4.176 24 C -0.225 4.225 25 Br 0.029 6.971 26 C -0.056 4.056 27 H 0.236 0.764 28 H 0.139 0.861 29 H -0.239 1.239 30 H -0.195 1.195 31 H 0.181 0.819 32 H 0.199 0.801 33 H 0.154 0.846 34 H 0.150 0.850 35 H 0.263 0.737 36 H 0.117 0.883 37 H 0.103 0.897 38 H 0.223 0.777 39 H 0.190 0.810 40 H 0.235 0.765 41 H 0.125 0.875 42 H 0.120 0.880 43 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 2.215 9.243 -0.989 9.556 hybrid contribution -1.235 0.598 -0.090 1.375 sum 0.980 9.841 -1.079 9.948 Atomic orbital electron populations 1.86597 1.18706 1.80444 1.50207 1.25331 0.83372 1.12468 0.98178 0.94098 0.89823 0.71017 0.76747 1.20281 1.02607 0.93561 0.98622 1.21299 0.93553 1.00881 0.91656 1.21568 1.05965 0.91459 1.01693 1.18784 0.93198 0.91737 0.86070 1.86248 1.68696 1.37950 1.28954 1.22885 0.99882 0.93629 0.88242 1.20522 0.77460 0.87976 0.83782 1.90814 1.55496 1.18827 1.79066 1.45289 1.55947 1.14029 1.19501 1.21543 0.95346 0.94964 0.86110 0.88849 1.23949 0.96248 0.97837 1.01453 1.23520 0.86596 1.01530 0.87476 0.83003 1.45723 1.27142 1.12375 1.27473 1.23235 0.95162 0.97920 1.01437 1.22683 1.04683 0.92515 1.01568 1.70272 1.12552 1.17867 1.25556 1.25220 0.99242 0.94531 0.92027 1.23760 0.93870 1.02865 0.97149 1.21282 1.09767 0.91939 0.99485 1.96768 1.94849 1.07775 1.97662 1.20890 0.95793 0.94489 0.94394 0.76401 0.86099 1.23869 1.19469 0.81858 0.80076 0.84646 0.84957 0.73721 0.88305 0.89735 0.77674 0.80957 0.76483 0.87538 0.88029 0.84720 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.27 12.83 -148.98 -1.91 -2.19 16 2 C -0.09 0.31 2.80 71.24 0.20 0.51 16 3 Si 0.78 -5.20 29.88 68.60 2.05 -3.15 16 4 C -0.15 0.49 5.35 -19.85 -0.11 0.39 16 5 C -0.06 0.44 8.66 22.26 0.19 0.63 16 6 C -0.19 1.51 9.04 22.36 0.20 1.72 16 7 C 0.15 -0.03 6.68 22.52 0.15 0.12 16 8 O -0.31 -0.50 9.01 -73.64 -0.66 -1.17 16 9 C 0.03 -0.29 5.22 71.23 0.37 0.09 16 10 C 0.52 -1.63 7.91 87.65 0.69 -0.93 16 11 O -0.56 -5.51 16.12 16.00 0.26 -5.25 16 12 N -0.69 7.80 5.26 -440.05 -2.32 5.48 16 13 C 0.13 -1.07 4.29 45.52 0.20 -0.88 16 14 H 0.09 -0.25 7.50 -2.38 -0.02 -0.26 16 15 C -0.16 1.32 7.45 31.21 0.23 1.55 16 16 C 0.11 -1.22 4.53 45.61 0.21 -1.02 16 17 H 0.15 -2.54 8.14 -2.39 -0.02 -2.55 16 18 N -0.45 1.62 2.94 -503.33 -1.48 0.14 16 19 C -0.04 0.10 11.58 83.09 0.96 1.06 16 20 C -0.07 -0.30 11.87 83.52 0.99 0.69 16 21 N -0.54 -4.84 11.25 -200.31 -2.25 -7.10 16 22 C 0.17 0.29 11.38 180.26 2.05 2.34 16 23 C -0.14 1.61 7.50 31.12 0.23 1.84 16 24 C -0.14 -0.57 6.24 22.40 0.14 -0.43 16 25 Br -0.06 -0.46 33.16 -20.37 -0.68 -1.14 16 26 C -0.04 -0.05 9.42 22.27 0.21 0.16 16 27 H 0.39 -2.14 8.70 -74.06 -0.64 -2.78 16 28 H 0.12 -0.52 7.96 -2.39 -0.02 -0.54 16 29 H -0.31 -0.82 7.11 99.48 0.71 -0.12 16 30 H -0.27 1.34 7.01 99.48 0.70 2.04 16 31 H 0.16 -2.18 4.83 -2.91 -0.01 -2.20 16 32 H 0.18 -3.07 6.30 -2.91 -0.02 -3.09 16 33 H 0.14 -2.27 7.66 -2.39 -0.02 -2.29 16 34 H 0.13 -2.15 7.66 -2.39 -0.02 -2.17 16 35 H 0.42 -8.37 8.70 -92.71 -0.81 -9.18 16 36 H 0.10 -0.69 6.93 -2.39 -0.02 -0.71 16 37 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 38 H 0.21 -2.03 8.06 -2.91 -0.02 -2.05 16 39 H 0.17 0.26 8.06 -2.91 -0.02 0.24 16 40 H 0.22 -0.82 7.44 -2.91 -0.02 -0.84 16 41 H 0.11 -1.56 8.14 -2.39 -0.02 -1.58 16 42 H 0.10 -0.96 7.90 -2.39 -0.02 -0.98 16 43 H 0.13 0.28 8.06 -2.91 -0.02 0.26 16 Total: 0.00 -35.54 384.67 -0.41 -35.95 By element: Atomic # 1 Polarization: -29.11 SS G_CDS: -0.34 Total: -29.45 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: 6.92 Total: 7.86 kcal Atomic # 7 Polarization: 4.58 SS G_CDS: -6.05 Total: -1.47 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -2.32 Total: -8.60 kcal Atomic # 14 Polarization: -5.20 SS G_CDS: 2.05 Total: -3.15 kcal Atomic # 35 Polarization: -0.46 SS G_CDS: -0.68 Total: -1.14 kcal Total: -35.54 -0.41 -35.95 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608530_6201210.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.800 kcal (2) G-P(sol) polarization free energy of solvation -35.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.255 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.953 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds