Wall clock time and date at job start Tue Mar 9 2021 13:08:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 N 1.30825 * 125.96648 * 2 1 4 4 C 1.33241 * 109.83246 * 180.12620 * 3 2 1 5 5 C 1.50696 * 125.52724 * 179.85918 * 4 3 2 6 6 H 1.08996 * 109.47390 * 359.71552 * 5 4 3 7 7 C 1.52997 * 109.47242 * 119.71582 * 5 4 3 8 8 C 1.53006 * 109.47127 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.46626 * 299.99539 * 8 7 5 10 10 H 1.08993 * 109.47839 * 299.99931 * 9 8 7 11 11 N 1.46506 * 109.46691 * 179.97438 * 9 8 7 12 12 C 1.34783 * 119.99811 * 155.00013 * 11 9 8 13 13 O 1.21287 * 119.99943 * 0.02562 * 12 11 9 14 14 C 1.50696 * 120.00006 * 179.97438 * 12 11 9 15 15 O 1.42894 * 109.47002 * 180.02562 * 14 12 11 16 16 C 1.35918 * 117.00296 * 180.02562 * 15 14 12 17 17 C 1.38788 * 120.06558 * 179.97438 * 16 15 14 18 18 Br 1.89099 * 120.03269 * 0.02562 * 17 16 15 19 19 C 1.38236 * 119.92939 * 179.97438 * 17 16 15 20 20 C 1.38241 * 120.05040 * 0.02562 * 19 17 16 21 21 C 1.50698 * 119.94551 * 179.97438 * 20 19 17 22 22 O 1.42898 * 109.47208 * 64.99852 * 21 20 19 23 23 Si 1.86304 * 109.47232 * 184.99976 * 21 20 19 24 24 C 1.38292 * 120.11259 * 359.97438 * 20 19 17 25 25 C 1.38141 * 120.07263 * 359.76600 * 24 20 19 26 26 C 1.52997 * 109.46991 * 60.00378 * 9 8 7 27 27 C 1.52996 * 109.47131 * 299.99311 * 26 9 8 28 28 N 1.30717 * 108.94496 * 359.58773 * 4 3 2 29 29 N 1.34431 * 125.95524 * 179.67318 * 2 1 3 30 30 H 1.09006 * 109.47334 * 270.30324 * 1 2 3 31 31 H 1.09007 * 109.47099 * 30.30005 * 1 2 3 32 32 H 1.08997 * 109.47785 * 150.30554 * 1 2 3 33 33 H 1.09001 * 109.47502 * 60.00161 * 7 5 4 34 34 H 1.09001 * 109.47289 * 299.99957 * 7 5 4 35 35 H 1.08993 * 109.46955 * 60.00011 * 8 7 5 36 36 H 1.09000 * 109.47050 * 179.97438 * 8 7 5 37 37 H 0.97000 * 120.00279 * 335.00513 * 11 9 8 38 38 H 1.08997 * 109.47646 * 300.00758 * 14 12 11 39 39 H 1.09002 * 109.46942 * 60.00572 * 14 12 11 40 40 H 1.08002 * 119.97730 * 179.97438 * 19 17 16 41 41 H 1.08997 * 109.46922 * 304.99677 * 21 20 19 42 42 H 0.96704 * 113.99965 * 60.00031 * 22 21 20 43 43 H 1.48495 * 109.99840 * 180.02562 * 23 21 20 44 44 H 1.48503 * 109.99545 * 301.31900 * 23 21 20 45 45 H 1.07997 * 119.95674 * 180.02562 * 24 20 19 46 46 H 1.08001 * 120.02607 * 180.24960 * 25 24 20 47 47 H 1.09001 * 109.47289 * 179.97438 * 26 9 8 48 48 H 1.09000 * 109.47611 * 59.99933 * 26 9 8 49 49 H 1.08996 * 109.47452 * 300.00000 * 27 26 9 50 50 H 1.09000 * 109.47054 * 180.02562 * 27 26 9 51 51 H 0.97004 * 126.82850 * 359.97438 * 29 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0588 0.0000 4 6 3.5552 0.6886 -0.0028 5 6 4.7372 1.6234 -0.0067 6 1 4.3848 2.6548 -0.0120 7 6 5.5839 1.3803 1.2443 8 6 6.7836 2.3298 1.2406 9 6 7.6320 2.0747 -0.0069 10 1 7.9849 1.0435 -0.0018 11 7 8.7804 2.9844 -0.0107 12 6 9.9028 2.6498 -0.6778 13 8 9.9618 1.5960 -1.2753 14 6 11.0839 3.5857 -0.6823 15 8 12.1428 3.0126 -1.4519 16 6 13.2897 3.7343 -1.5570 17 6 14.3591 3.2376 -2.2891 18 35 14.2220 1.5557 -3.1424 19 6 15.5241 3.9742 -2.3946 20 6 15.6244 5.2040 -1.7713 21 6 16.8958 6.0047 -1.8875 22 8 17.0925 6.3914 -3.2490 23 14 16.7703 7.5274 -0.8214 24 6 14.5600 5.7008 -1.0414 25 6 13.3916 4.9712 -0.9372 26 6 6.7853 2.3178 -1.2578 27 6 5.5856 1.3683 -1.2541 28 7 3.6194 -0.6170 0.0043 29 7 2.2963 -1.0882 0.0062 30 1 -0.3634 0.0054 1.0277 31 1 -0.3634 0.8873 -0.5185 32 1 -0.3634 -0.8926 -0.5090 33 1 5.9365 0.3488 1.2497 34 1 4.9797 1.5623 2.1330 35 1 6.4308 3.3610 1.2355 36 1 7.3866 2.1569 2.1320 37 1 8.7331 3.8273 0.4669 38 1 10.7905 4.5390 -1.1218 39 1 11.4238 3.7466 0.3408 40 1 16.3569 3.5882 -2.9638 41 1 17.7387 5.3981 -1.5566 42 1 16.3790 6.9348 -3.6106 43 1 18.0177 8.3260 -0.9276 44 1 15.6056 8.3471 -1.2419 45 1 14.6410 6.6620 -0.5559 46 1 12.5594 5.3617 -0.3703 47 1 7.3898 2.1366 -2.1466 48 1 6.4325 3.3491 -1.2630 49 1 5.9384 0.3371 -1.2490 50 1 4.9827 1.5412 -2.1456 51 1 2.0092 -2.0147 0.0118 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15608548_6201210.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:13 Heat of formation + Delta-G solvation = 7.707827 kcal Electronic energy + Delta-G solvation = -34619.719366 eV Core-core repulsion = 29761.791965 eV Total energy + Delta-G solvation = -4857.927400 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 451.094 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -43.15610 -41.72188 -40.92443 -39.57261 -38.82509 -37.34035 -35.72648 -33.82661 -33.55917 -33.32873 -32.03352 -31.89104 -31.24234 -30.32522 -29.34965 -28.57324 -26.41601 -24.83708 -23.88576 -23.84177 -22.51847 -22.30276 -21.58152 -21.43722 -20.54657 -19.63866 -18.87946 -18.60824 -18.20535 -17.56237 -17.29421 -17.12905 -16.69219 -16.47987 -16.28803 -16.02682 -15.76133 -15.68369 -15.34219 -15.15865 -15.12693 -14.85615 -14.72064 -14.43860 -14.23471 -14.11720 -13.92191 -13.83679 -13.76258 -13.62206 -13.50542 -13.27304 -12.86843 -12.43839 -12.36814 -12.27864 -12.25645 -12.22074 -12.18020 -11.79691 -11.73522 -11.64557 -11.45140 -11.05165 -10.97871 -10.95449 -10.84223 -10.63791 -10.38771 -10.13178 -9.96119 -9.32406 -5.04206 -0.07747 0.08210 0.61374 0.74233 1.21801 1.34988 1.50158 1.50329 1.65520 1.88719 1.90209 2.34690 2.43428 2.89833 3.30042 3.36486 3.49989 3.54442 3.60397 3.61405 3.63696 3.70103 3.75854 3.81856 3.83339 4.02413 4.03995 4.11477 4.18232 4.29479 4.32017 4.33162 4.37666 4.42119 4.47743 4.48948 4.57634 4.65318 4.70508 4.75794 4.78504 4.92621 4.95086 5.01332 5.08549 5.12970 5.17912 5.23426 5.28207 5.33509 5.39547 5.42992 5.51879 5.99142 6.05869 6.35024 6.35322 7.11368 7.13645 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C 0.284 3.716 3 N -0.540 5.540 4 C 0.235 3.765 5 C 0.007 3.993 6 H 0.100 0.900 7 C -0.106 4.106 8 C -0.123 4.123 9 C 0.146 3.854 10 H 0.093 0.907 11 N -0.724 5.724 12 C 0.516 3.484 13 O -0.505 6.505 14 C 0.036 3.964 15 O -0.273 6.273 16 C 0.161 3.839 17 C -0.123 4.123 18 Br -0.025 7.025 19 C -0.023 4.023 20 C -0.151 4.151 21 C -0.070 4.070 22 O -0.528 6.528 23 Si 0.686 3.314 24 C -0.062 4.062 25 C -0.201 4.201 26 C -0.128 4.128 27 C -0.106 4.106 28 N -0.309 5.309 29 N -0.484 5.484 30 H 0.093 0.907 31 H 0.099 0.901 32 H 0.084 0.916 33 H 0.075 0.925 34 H 0.072 0.928 35 H 0.074 0.926 36 H 0.076 0.924 37 H 0.402 0.598 38 H 0.097 0.903 39 H 0.098 0.902 40 H 0.144 0.856 41 H 0.120 0.880 42 H 0.376 0.624 43 H -0.255 1.255 44 H -0.259 1.259 45 H 0.137 0.863 46 H 0.141 0.859 47 H 0.073 0.927 48 H 0.069 0.931 49 H 0.074 0.926 50 H 0.069 0.931 51 H 0.441 0.559 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.406 3.850 5.942 8.908 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C 0.006 3.994 3 N -0.269 5.269 4 C -0.048 4.048 5 C -0.014 4.014 6 H 0.118 0.882 7 C -0.145 4.145 8 C -0.162 4.162 9 C 0.042 3.958 10 H 0.111 0.889 11 N -0.378 5.378 12 C 0.300 3.700 13 O -0.378 6.378 14 C -0.042 4.042 15 O -0.185 6.185 16 C 0.113 3.887 17 C -0.203 4.203 18 Br 0.061 6.939 19 C -0.043 4.043 20 C -0.152 4.152 21 C -0.180 4.180 22 O -0.334 6.334 23 Si 0.587 3.413 24 C -0.080 4.080 25 C -0.220 4.220 26 C -0.166 4.166 27 C -0.146 4.146 28 N -0.138 5.138 29 N -0.202 5.202 30 H 0.112 0.888 31 H 0.118 0.882 32 H 0.103 0.897 33 H 0.094 0.906 34 H 0.091 0.909 35 H 0.092 0.908 36 H 0.094 0.906 37 H 0.236 0.764 38 H 0.114 0.886 39 H 0.116 0.884 40 H 0.161 0.839 41 H 0.138 0.862 42 H 0.224 0.776 43 H -0.180 1.180 44 H -0.184 1.184 45 H 0.154 0.846 46 H 0.159 0.841 47 H 0.092 0.908 48 H 0.087 0.913 49 H 0.093 0.907 50 H 0.088 0.912 51 H 0.287 0.713 Dipole moment (debyes) X Y Z Total from point charges -4.332 2.731 5.194 7.294 hybrid contribution -0.955 0.401 -0.593 1.194 sum -5.287 3.132 4.601 7.677 Atomic orbital electron populations 1.20433 0.83483 1.05221 1.04775 1.24444 0.96717 0.82844 0.95434 1.70387 1.01394 1.29570 1.25573 1.24168 0.93079 0.90129 0.97443 1.19623 0.88560 0.96788 0.96479 0.88210 1.21502 0.95527 1.00546 0.96897 1.21792 0.96472 1.00628 0.97264 1.21076 0.84651 0.94944 0.95101 0.88865 1.45887 1.13975 1.23709 1.54203 1.19941 0.83307 0.87208 0.79579 1.90816 1.81819 1.23770 1.41401 1.22572 0.87002 0.96981 0.97682 1.86291 1.20595 1.43819 1.67768 1.18652 0.85810 0.90270 0.93965 1.21160 0.95957 0.96831 1.06400 1.96814 1.98587 1.20856 1.77672 1.20886 0.95331 0.92401 0.95718 1.20197 0.97021 0.96421 1.01568 1.24988 0.97364 1.06320 0.89355 1.86624 1.49331 1.72469 1.25013 0.95071 0.80323 0.77094 0.88802 1.20978 0.91922 0.99123 0.95961 1.21167 1.00466 0.94783 1.05592 1.21915 0.96310 0.99996 0.98405 1.21515 0.95663 1.00711 0.96671 1.78006 0.96569 1.12378 1.26826 1.48040 1.04368 1.10167 1.57614 0.88814 0.88197 0.89713 0.90639 0.90946 0.90782 0.90582 0.76421 0.88555 0.88431 0.83853 0.86190 0.77599 1.18017 1.18444 0.84601 0.84142 0.90786 0.91255 0.90723 0.91210 0.71344 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.28 10.51 36.00 0.38 0.66 16 2 C 0.28 0.21 8.24 -155.70 -1.28 -1.08 16 3 N -0.54 -1.81 11.19 -8.16 -0.09 -1.90 16 4 C 0.23 0.70 6.65 -156.85 -1.04 -0.34 16 5 C 0.01 0.00 2.66 -91.77 -0.24 -0.24 16 6 H 0.10 -0.01 8.14 -51.93 -0.42 -0.44 16 7 C -0.11 0.09 5.19 -26.73 -0.14 -0.05 16 8 C -0.12 0.33 5.39 -26.73 -0.14 0.19 16 9 C 0.15 -0.15 2.45 -67.93 -0.17 -0.31 16 10 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 11 N -0.72 1.61 5.08 -53.81 -0.27 1.34 16 12 C 0.52 0.44 7.87 -10.98 -0.09 0.36 16 13 O -0.51 -3.07 16.16 -14.36 -0.23 -3.30 16 14 C 0.04 -0.06 5.22 36.00 0.19 0.13 16 15 O -0.27 -0.67 9.00 -39.39 -0.35 -1.02 16 16 C 0.16 0.24 6.68 -39.20 -0.26 -0.02 16 17 C -0.12 -0.30 6.24 -39.38 -0.25 -0.55 16 18 Br -0.02 -0.10 33.16 -68.01 -2.26 -2.35 16 19 C -0.02 -0.02 9.42 -39.58 -0.37 -0.40 16 20 C -0.15 0.07 5.35 -104.60 -0.56 -0.49 16 21 C -0.07 0.07 2.80 36.00 0.10 0.17 16 22 O -0.53 -0.37 12.83 -35.23 -0.45 -0.82 16 23 Si 0.69 -1.36 29.88 -169.99 -5.08 -6.44 16 24 C -0.06 0.10 8.66 -39.60 -0.34 -0.24 16 25 C -0.20 0.27 9.04 -39.44 -0.36 -0.08 16 26 C -0.13 0.06 5.49 -26.73 -0.15 -0.09 16 27 C -0.11 -0.05 5.19 -26.73 -0.14 -0.19 16 28 N -0.31 -1.03 12.80 32.42 0.41 -0.62 16 29 N -0.48 -0.29 7.45 32.62 0.24 -0.04 16 30 H 0.09 -0.42 8.14 -51.93 -0.42 -0.85 16 31 H 0.10 -0.34 8.14 -51.92 -0.42 -0.76 16 32 H 0.08 -0.47 8.14 -51.93 -0.42 -0.89 16 33 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 36 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 37 H 0.40 -2.25 8.60 -40.82 -0.35 -2.60 16 38 H 0.10 -0.42 7.65 -51.93 -0.40 -0.82 16 39 H 0.10 -0.44 7.67 -51.93 -0.40 -0.84 16 40 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 41 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 42 H 0.38 -0.80 8.70 45.56 0.40 -0.40 16 43 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 44 H -0.26 0.11 7.01 56.52 0.40 0.50 16 45 H 0.14 -0.51 4.83 -52.49 -0.25 -0.76 16 46 H 0.14 -0.63 6.30 -52.49 -0.33 -0.96 16 47 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 48 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 49 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 50 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 51 H 0.44 -1.22 8.96 -182.33 -1.63 -2.86 16 LS Contribution 438.72 15.07 6.61 6.61 Total: 0.00 -12.90 438.72 -14.81 -27.71 By element: Atomic # 1 Polarization: -8.10 SS G_CDS: -8.48 Total: -16.58 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -4.86 Total: -2.59 kcal Atomic # 7 Polarization: -1.51 SS G_CDS: 0.29 Total: -1.22 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -1.04 Total: -5.14 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.08 Total: -6.44 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -2.26 Total: -2.35 kcal Total LS contribution 6.61 Total: 6.61 kcal Total: -12.90 -14.81 -27.71 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608548_6201210.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.416 kcal (2) G-P(sol) polarization free energy of solvation -12.902 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.807 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.708 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.708 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds