Wall clock time and date at job start Tue Mar 9 2021 13:08:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 N 1.30831 * 125.96102 * 2 1 4 4 C 1.33243 * 109.82641 * 180.02562 * 3 2 1 5 5 C 1.50700 * 125.52672 * 179.97438 * 4 3 2 6 6 H 1.08996 * 109.46923 * 0.02562 * 5 4 3 7 7 C 1.52999 * 109.47098 * 119.99551 * 5 4 3 8 8 C 1.53005 * 109.47076 * 179.97438 * 7 5 4 9 9 C 1.52995 * 109.47228 * 300.00529 * 8 7 5 10 10 H 1.09007 * 109.46875 * 299.99554 * 9 8 7 11 11 N 1.46499 * 109.47022 * 179.97438 * 9 8 7 12 12 C 1.34784 * 119.99971 * 84.99732 * 11 9 8 13 13 O 1.21274 * 119.99897 * 359.72827 * 12 11 9 14 14 C 1.50695 * 119.99635 * 179.97438 * 12 11 9 15 15 N 1.46506 * 109.46874 * 180.02562 * 14 12 11 16 16 C 1.36828 * 125.05794 * 264.69612 * 15 14 12 17 17 C 1.34241 * 109.93527 * 179.81206 * 16 15 14 18 18 C 1.50703 * 126.50121 * 180.16613 * 17 16 15 19 19 O 1.42896 * 109.46836 * 105.31872 * 18 17 16 20 20 Si 1.86299 * 109.47048 * 345.32343 * 18 17 16 21 21 C 1.46484 * 107.00018 * 0.43599 * 17 16 15 22 22 C 1.39591 * 134.03993 * 179.75579 * 21 17 16 23 23 C 1.36658 * 119.76576 * 179.97438 * 22 21 17 24 24 C 1.38788 * 120.53108 * 0.02562 * 23 22 21 25 25 C 1.37789 * 120.66159 * 359.97438 * 24 23 22 26 26 C 1.37686 * 125.06420 * 84.99756 * 15 14 12 27 27 C 1.52999 * 109.47524 * 59.99745 * 9 8 7 28 28 C 1.52996 * 109.47326 * 239.99696 * 5 4 3 29 29 N 1.30712 * 108.94725 * 0.25639 * 4 3 2 30 30 N 1.34429 * 125.95756 * 180.02562 * 2 1 3 31 31 H 1.09007 * 109.46805 * 89.99921 * 1 2 3 32 32 H 1.08993 * 109.47167 * 210.00358 * 1 2 3 33 33 H 1.09000 * 109.47197 * 330.00746 * 1 2 3 34 34 H 1.08996 * 109.47227 * 300.00558 * 7 5 4 35 35 H 1.09007 * 109.47200 * 60.00239 * 7 5 4 36 36 H 1.09001 * 109.46819 * 179.97438 * 8 7 5 37 37 H 1.08996 * 109.46852 * 60.00557 * 8 7 5 38 38 H 0.96999 * 119.99984 * 264.99579 * 11 9 8 39 39 H 1.09005 * 109.47403 * 300.00056 * 14 12 11 40 40 H 1.09002 * 109.47422 * 60.00295 * 14 12 11 41 41 H 1.08006 * 125.03726 * 359.96533 * 16 15 14 42 42 H 1.08995 * 109.47156 * 225.31924 * 18 17 16 43 43 H 0.96701 * 114.00283 * 300.00097 * 19 18 17 44 44 H 1.48503 * 109.99910 * 179.97438 * 20 18 17 45 45 H 1.48504 * 109.99892 * 301.31501 * 20 18 17 46 46 H 1.08000 * 120.11215 * 359.94941 * 22 21 17 47 47 H 1.08002 * 119.73754 * 179.97438 * 23 22 21 48 48 H 1.08001 * 119.66973 * 180.02562 * 24 23 22 49 49 H 1.08002 * 120.10725 * 179.97438 * 25 24 23 50 50 H 1.08996 * 109.46825 * 59.99807 * 27 9 8 51 51 H 1.08993 * 109.47204 * 180.02562 * 27 9 8 52 52 H 1.09006 * 109.46787 * 60.00196 * 28 5 4 53 53 H 1.09003 * 109.47095 * 300.00297 * 28 5 4 54 54 H 0.96997 * 126.82551 * 359.97438 * 30 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0590 0.0000 4 6 3.5553 0.6887 -0.0006 5 6 4.7373 1.6235 -0.0013 6 1 4.3848 2.6549 -0.0008 7 6 5.5853 1.3744 1.2476 8 6 6.7857 2.3231 1.2466 9 6 7.6323 2.0729 -0.0030 10 1 7.9845 1.0413 -0.0027 11 7 8.7814 2.9817 -0.0043 12 6 9.9035 2.6502 0.6648 13 8 9.9601 1.6019 1.2719 14 6 11.0856 3.5848 0.6629 15 7 12.1712 3.0006 1.4545 16 6 12.4168 3.2724 2.7729 17 6 13.4798 2.5695 3.1948 18 6 14.0710 2.5835 4.5809 19 8 13.7219 1.3755 5.2597 20 14 13.4021 4.0426 5.5266 21 6 13.9603 1.7914 2.0505 22 6 15.0115 0.8927 1.8607 23 6 15.1995 0.3174 0.6355 24 6 14.3538 0.6198 -0.4226 25 6 13.3101 1.5041 -0.2574 26 6 13.0997 2.1009 0.9811 27 6 6.7844 2.3220 -1.2519 28 6 5.5842 1.3739 -1.2508 29 7 3.6194 -0.6168 -0.0065 30 7 2.2964 -1.0881 -0.0005 31 1 -0.3633 0.0000 -1.0277 32 1 -0.3633 -0.8899 0.5138 33 1 -0.3633 0.8900 0.5137 34 1 4.9819 1.5522 2.1378 35 1 5.9378 0.3429 1.2477 36 1 7.3895 2.1459 2.1366 37 1 6.4336 3.3546 1.2463 38 1 8.7346 3.8219 -0.4867 39 1 11.4255 3.7389 -0.3613 40 1 10.7934 4.5413 1.0965 41 1 11.8393 3.9500 3.3843 42 1 15.1560 2.6613 4.5124 43 1 12.7694 1.2401 5.3571 44 1 13.9770 4.0674 6.8956 45 1 13.7309 5.3035 4.8143 46 1 15.6741 0.6533 2.6793 47 1 16.0132 -0.3775 0.4891 48 1 14.5149 0.1568 -1.3849 49 1 12.6577 1.7332 -1.0870 50 1 6.4322 3.3535 -1.2521 51 1 7.3874 2.1434 -2.1421 52 1 4.9800 1.5514 -2.1406 53 1 5.9366 0.3425 -1.2508 54 1 2.0093 -2.0146 -0.0006 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15608548_9818708.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:41 Heat of formation + Delta-G solvation = 74.613398 kcal Electronic energy + Delta-G solvation = -36499.776920 eV Core-core repulsion = 31825.835147 eV Total energy + Delta-G solvation = -4673.941773 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.195 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.23006 -42.51753 -40.96366 -39.26130 -38.09048 -37.59364 -35.74112 -34.14836 -33.66990 -33.38134 -31.85209 -31.63005 -30.63975 -30.22567 -28.94225 -28.43275 -25.88178 -24.63311 -23.80888 -23.70022 -22.74316 -22.28646 -21.55103 -21.45539 -20.71817 -20.49527 -18.92384 -18.61030 -18.30875 -17.78915 -17.35891 -16.94445 -16.75125 -16.45147 -16.29520 -16.21838 -15.90063 -15.46551 -15.35986 -15.26727 -15.14724 -14.89090 -14.77451 -14.69567 -14.39438 -14.07885 -14.03766 -13.96586 -13.68524 -13.64688 -13.48973 -13.26199 -13.10012 -12.84887 -12.72296 -12.56818 -12.30290 -12.26725 -12.23225 -12.14587 -12.10745 -11.80771 -11.63811 -11.44690 -11.10036 -11.06654 -11.01715 -10.53794 -10.46802 -10.29924 -10.07951 -9.15427 -8.61808 -4.99210 0.14255 0.55319 0.63300 1.37221 1.43086 1.54097 1.69058 1.69839 1.72735 1.78652 2.00277 2.24981 2.92645 2.95122 3.50084 3.59094 3.65282 3.68918 3.69867 3.73388 3.76367 3.84494 3.89820 4.06025 4.09337 4.19092 4.20211 4.21442 4.22535 4.30600 4.38754 4.40665 4.47487 4.48097 4.55979 4.62727 4.66395 4.67379 4.71854 4.78809 4.83429 4.88363 5.02626 5.03494 5.04485 5.09901 5.13083 5.14353 5.23211 5.28167 5.35873 5.40940 5.50028 5.52857 5.65436 5.73317 5.75634 6.15181 6.21095 6.25624 6.56285 6.81910 7.05333 7.23420 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.285 3.715 3 N -0.573 5.573 4 C 0.225 3.775 5 C 0.010 3.990 6 H 0.110 0.890 7 C -0.099 4.099 8 C -0.116 4.116 9 C 0.149 3.851 10 H 0.057 0.943 11 N -0.706 5.706 12 C 0.492 3.508 13 O -0.569 6.569 14 C 0.087 3.913 15 N -0.466 5.466 16 C 0.081 3.919 17 C -0.227 4.227 18 C -0.047 4.047 19 O -0.565 6.565 20 Si 0.794 3.206 21 C -0.118 4.118 22 C -0.091 4.091 23 C -0.154 4.154 24 C -0.109 4.109 25 C -0.133 4.133 26 C 0.091 3.909 27 C -0.112 4.112 28 C -0.101 4.101 29 N -0.344 5.344 30 N -0.481 5.481 31 H 0.108 0.892 32 H 0.108 0.892 33 H 0.101 0.899 34 H 0.062 0.938 35 H 0.050 0.950 36 H 0.054 0.946 37 H 0.090 0.910 38 H 0.421 0.579 39 H 0.141 0.859 40 H 0.167 0.833 41 H 0.209 0.791 42 H 0.091 0.909 43 H 0.390 0.610 44 H -0.301 1.301 45 H -0.273 1.273 46 H 0.115 0.885 47 H 0.135 0.865 48 H 0.145 0.855 49 H 0.134 0.866 50 H 0.099 0.901 51 H 0.083 0.917 52 H 0.072 0.928 53 H 0.054 0.946 54 H 0.453 0.547 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.464 5.935 -4.727 12.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.007 3.993 3 N -0.303 5.303 4 C -0.058 4.058 5 C -0.011 4.011 6 H 0.128 0.872 7 C -0.138 4.138 8 C -0.155 4.155 9 C 0.044 3.956 10 H 0.076 0.924 11 N -0.360 5.360 12 C 0.278 3.722 13 O -0.447 6.447 14 C -0.038 4.038 15 N -0.148 5.148 16 C -0.044 4.044 17 C -0.234 4.234 18 C -0.156 4.156 19 O -0.372 6.372 20 Si 0.698 3.302 21 C -0.122 4.122 22 C -0.110 4.110 23 C -0.173 4.173 24 C -0.129 4.129 25 C -0.153 4.153 26 C -0.015 4.015 27 C -0.150 4.150 28 C -0.140 4.140 29 N -0.173 5.173 30 N -0.200 5.200 31 H 0.126 0.874 32 H 0.127 0.873 33 H 0.119 0.881 34 H 0.081 0.919 35 H 0.069 0.931 36 H 0.073 0.927 37 H 0.109 0.891 38 H 0.260 0.740 39 H 0.159 0.841 40 H 0.184 0.816 41 H 0.225 0.775 42 H 0.109 0.891 43 H 0.239 0.761 44 H -0.229 1.229 45 H -0.199 1.199 46 H 0.133 0.867 47 H 0.153 0.847 48 H 0.163 0.837 49 H 0.152 0.848 50 H 0.117 0.883 51 H 0.101 0.899 52 H 0.091 0.909 53 H 0.073 0.927 54 H 0.301 0.699 Dipole moment (debyes) X Y Z Total from point charges -8.294 5.967 -4.054 10.993 hybrid contribution 0.317 -1.389 -0.391 1.478 sum -7.977 4.578 -4.445 10.215 Atomic orbital electron populations 1.20638 0.80489 1.06460 1.05994 1.25212 0.98187 0.82256 0.93620 1.70401 1.01781 1.30961 1.27180 1.24617 0.93794 0.90355 0.97035 1.19692 0.87972 0.96767 0.96663 0.87184 1.21404 0.96084 0.99770 0.96555 1.21796 0.95333 1.00633 0.97690 1.20881 0.85318 0.93683 0.95688 0.92449 1.45849 1.12991 1.24188 1.52925 1.21394 0.84912 0.87280 0.78641 1.90810 1.82988 1.26696 1.44243 1.22012 0.83931 0.97286 1.00528 1.43447 1.24305 1.37440 1.09594 1.22078 0.97457 1.00794 0.84121 1.20798 1.01789 1.04944 0.95894 1.24705 1.01690 0.97921 0.91299 1.86437 1.30436 1.42287 1.78061 0.93976 0.88890 0.72531 0.74843 1.19381 0.98022 1.00910 0.93922 1.20433 0.96799 0.96089 0.97692 1.20900 1.01407 1.02042 0.92977 1.21120 0.94453 0.97509 0.99770 1.20255 1.00523 0.99927 0.94623 1.18384 0.92184 0.95441 0.95453 1.21712 0.95327 1.01363 0.96621 1.21424 0.96132 1.00016 0.96395 1.77926 0.98314 1.12957 1.28121 1.48010 1.03631 1.11012 1.57380 0.87401 0.87323 0.88075 0.91929 0.93101 0.92716 0.89099 0.74047 0.84106 0.81596 0.77458 0.89120 0.76056 1.22906 1.19896 0.86700 0.84733 0.83736 0.84844 0.88284 0.89876 0.90934 0.92684 0.69870 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.64 10.51 71.24 0.75 1.39 16 2 C 0.29 0.35 8.24 138.23 1.14 1.49 16 3 N -0.57 -3.94 11.19 -179.72 -2.01 -5.95 16 4 C 0.22 1.50 6.65 138.63 0.92 2.42 16 5 C 0.01 0.01 2.66 -11.54 -0.03 -0.02 16 6 H 0.11 -0.15 8.14 -2.39 -0.02 -0.17 16 7 C -0.10 -0.14 5.19 30.60 0.16 0.02 16 8 C -0.12 0.26 5.49 30.59 0.17 0.42 16 9 C 0.15 -0.46 2.45 44.99 0.11 -0.35 16 10 H 0.06 0.25 7.58 -2.38 -0.02 0.24 16 11 N -0.71 5.29 5.08 -442.54 -2.25 3.04 16 12 C 0.49 -0.77 7.86 87.65 0.69 -0.08 16 13 O -0.57 -5.96 16.09 -3.01 -0.05 -6.00 16 14 C 0.09 -0.65 6.48 85.63 0.56 -0.10 16 15 N -0.47 -0.82 2.27 -519.98 -1.18 -2.00 16 16 C 0.08 0.08 9.89 83.00 0.82 0.90 16 17 C -0.23 -1.48 5.58 -18.63 -0.10 -1.59 16 18 C -0.05 -0.24 3.06 71.24 0.22 -0.02 16 19 O -0.56 -4.18 12.88 -148.98 -1.92 -6.09 16 20 Si 0.79 -0.57 30.75 68.60 2.11 1.54 16 21 C -0.12 -1.33 6.35 -20.20 -0.13 -1.46 16 22 C -0.09 -1.04 10.05 22.23 0.22 -0.81 16 23 C -0.15 -1.27 9.97 22.03 0.22 -1.05 16 24 C -0.11 -0.68 10.01 22.29 0.22 -0.46 16 25 C -0.13 -0.83 10.00 22.37 0.22 -0.61 16 26 C 0.09 0.74 6.80 39.03 0.27 1.00 16 27 C -0.11 0.78 5.39 30.58 0.16 0.94 16 28 C -0.10 0.15 5.18 30.58 0.16 0.31 16 29 N -0.34 -2.72 12.80 -51.33 -0.66 -3.38 16 30 N -0.48 -0.74 7.45 -50.70 -0.38 -1.12 16 31 H 0.11 -1.16 8.14 -2.38 -0.02 -1.18 16 32 H 0.11 -1.42 8.14 -2.39 -0.02 -1.44 16 33 H 0.10 -0.82 8.14 -2.39 -0.02 -0.83 16 34 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 35 H 0.05 0.30 8.14 -2.38 -0.02 0.28 16 36 H 0.05 0.12 8.14 -2.39 -0.02 0.10 16 37 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 38 H 0.42 -6.47 8.60 -92.71 -0.80 -7.26 16 39 H 0.14 -1.71 8.14 -2.38 -0.02 -1.73 16 40 H 0.17 -2.69 8.12 -2.39 -0.02 -2.70 16 41 H 0.21 -1.69 6.34 -2.91 -0.02 -1.71 16 42 H 0.09 0.69 7.96 -2.39 -0.02 0.67 16 43 H 0.39 0.00 8.70 -74.06 -0.64 -0.64 16 44 H -0.30 -2.09 7.11 99.48 0.71 -1.39 16 45 H -0.27 -0.59 7.11 99.48 0.71 0.11 16 46 H 0.11 1.23 8.06 -2.91 -0.02 1.21 16 47 H 0.13 0.56 8.06 -2.91 -0.02 0.54 16 48 H 0.14 0.15 8.06 -2.91 -0.02 0.12 16 49 H 0.13 0.16 8.06 -2.91 -0.02 0.14 16 50 H 0.10 -1.11 8.14 -2.39 -0.02 -1.13 16 51 H 0.08 -0.65 8.14 -2.39 -0.02 -0.67 16 52 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 53 H 0.05 0.14 8.14 -2.39 -0.02 0.13 16 54 H 0.45 -2.42 8.96 -213.10 -1.91 -4.33 16 Total: 0.00 -37.90 444.86 -1.94 -39.85 By element: Atomic # 1 Polarization: -19.86 SS G_CDS: -2.36 Total: -22.22 kcal Atomic # 6 Polarization: -4.41 SS G_CDS: 6.74 Total: 2.33 kcal Atomic # 7 Polarization: -2.94 SS G_CDS: -6.47 Total: -9.41 kcal Atomic # 8 Polarization: -10.13 SS G_CDS: -1.97 Total: -12.10 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: 2.11 Total: 1.54 kcal Total: -37.90 -1.94 -39.85 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15608548_9818708.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.458 kcal (2) G-P(sol) polarization free energy of solvation -37.902 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.557 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.845 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds