Wall clock time and date at job start Tue Mar 9 2021 12:59:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 C 1.53899 * 113.59596 * 279.19659 * 5 3 2 7 7 C 1.53315 * 86.83253 * 220.49086 * 6 5 3 8 8 C 1.53134 * 87.75925 * 25.01052 * 7 6 5 9 9 C 1.53740 * 114.69653 * 268.65759 * 7 6 5 10 10 C 1.55304 * 102.73562 * 251.57672 * 9 7 6 11 11 C 1.54970 * 101.66399 * 325.01831 * 10 9 7 12 12 N 1.46378 * 115.40652 * 142.16167 * 7 6 5 13 13 C 1.34778 * 125.79908 * 311.07947 * 12 7 6 14 14 O 1.21693 * 120.00430 * 359.97438 * 13 12 7 15 15 C 1.46431 * 119.99730 * 179.97438 * 13 12 7 16 16 C 1.34807 * 120.00058 * 179.97438 * 15 13 12 17 17 C 1.47201 * 120.00234 * 179.97438 * 16 15 13 18 18 C 1.39830 * 120.16966 * 359.72534 * 17 16 15 19 19 C 1.37895 * 119.82817 * 179.81260 * 18 17 16 20 20 C 1.38404 * 120.16928 * 0.43992 * 19 18 17 21 21 C 1.50695 * 119.82819 * 179.76345 * 20 19 18 22 22 O 1.42904 * 109.47446 * 245.02300 * 21 20 19 23 23 Si 1.86301 * 109.47344 * 5.02627 * 21 20 19 24 24 C 1.38403 * 120.34695 * 359.78969 * 20 19 18 25 25 C 1.37900 * 120.16674 * 0.02562 * 24 20 19 26 26 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 27 27 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 29 29 H 1.08997 * 112.83549 * 50.33146 * 5 3 2 30 30 H 1.09003 * 113.63917 * 334.95953 * 6 5 3 31 31 H 1.08998 * 113.65031 * 105.96079 * 6 5 3 32 32 H 1.09007 * 113.64846 * 220.48724 * 8 7 6 33 33 H 1.09007 * 113.64655 * 89.49003 * 8 7 6 34 34 H 1.08997 * 110.76125 * 9.88666 * 9 7 6 35 35 H 1.09000 * 110.76188 * 133.07964 * 9 7 6 36 36 H 1.08999 * 110.98801 * 83.11076 * 10 9 7 37 37 H 1.08997 * 110.99200 * 206.91989 * 10 9 7 38 38 H 1.08998 * 110.36439 * 155.52736 * 11 10 9 39 39 H 1.09003 * 110.35896 * 277.72542 * 11 10 9 40 40 H 1.08004 * 119.99997 * 359.97438 * 15 13 12 41 41 H 1.08004 * 119.99945 * 359.97438 * 16 15 13 42 42 H 1.07999 * 120.08729 * 359.97438 * 18 17 16 43 43 H 1.08004 * 119.91751 * 180.20911 * 19 18 17 44 44 H 1.09004 * 109.47156 * 125.02632 * 21 20 19 45 45 H 0.96701 * 113.99938 * 180.02562 * 22 21 20 46 46 H 1.48496 * 110.00190 * 178.68006 * 23 21 20 47 47 H 1.48497 * 109.99912 * 300.00034 * 23 21 20 48 48 H 1.07994 * 119.92203 * 179.97438 * 24 20 19 49 49 H 1.07995 * 120.08415 * 179.97438 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1927 1.0824 1.3931 7 6 5.1685 2.2030 1.0154 8 6 4.1077 2.7150 0.0369 9 6 6.4736 1.7242 0.3590 10 6 7.5278 1.9722 1.4721 11 6 6.9873 3.2655 2.1330 12 7 5.5184 3.1227 2.0991 13 6 4.6476 3.7347 2.9259 14 8 3.4526 3.5401 2.8032 15 6 5.1393 4.6337 3.9719 16 6 4.2683 5.2462 4.7986 17 6 4.7626 6.1496 5.8504 18 6 6.1354 6.3705 5.9990 19 6 6.5905 7.2211 6.9843 20 6 5.6930 7.8485 7.8307 21 6 6.1992 8.7724 8.9082 22 8 5.8960 8.2199 10.1907 23 14 8.0436 8.9728 8.7386 24 6 4.3331 7.6313 7.6931 25 6 3.8622 6.7864 6.7102 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 4.0226 0.6566 -0.7724 30 1 3.5237 1.3432 2.2132 31 1 4.6708 0.1120 1.5271 32 1 4.5176 3.0521 -0.9153 33 1 3.4149 3.4315 0.4785 34 1 6.4154 0.6644 0.1113 35 1 6.6989 2.3150 -0.5289 36 1 7.5447 1.1474 2.1845 37 1 8.5166 2.1364 1.0439 38 1 7.3375 3.3403 3.1625 39 1 7.2981 4.1411 1.5629 40 1 6.1999 4.8061 4.0811 41 1 3.2077 5.0742 4.6891 42 1 6.8372 5.8781 5.3422 43 1 7.6503 7.3954 7.0982 44 1 5.7174 9.7451 8.8086 45 1 6.1932 8.7633 10.9334 46 1 8.5506 9.9068 9.7758 47 1 8.7122 7.6536 8.8725 48 1 3.6389 8.1241 8.3576 49 1 2.8008 6.6176 6.6043 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:17 Heat of formation + Delta-G solvation = -67.525139 kcal Electronic energy + Delta-G solvation = -31435.868791 eV Core-core repulsion = 27103.167826 eV Total energy + Delta-G solvation = -4332.700965 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.166 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.35202 -40.97894 -40.58641 -39.16827 -37.86926 -37.43653 -36.54037 -35.10284 -32.78970 -32.20865 -31.26794 -29.65199 -28.07406 -27.27259 -26.88591 -25.45439 -24.29257 -23.95778 -23.16565 -22.18516 -21.20109 -20.14470 -19.30040 -18.62840 -18.59287 -18.20196 -17.75630 -17.30789 -17.18932 -16.89864 -16.74388 -16.29055 -16.06296 -15.68135 -15.49212 -15.29710 -14.98315 -14.66842 -14.46785 -14.37086 -14.35910 -14.05851 -13.92855 -13.87691 -13.70240 -13.60285 -13.40789 -13.21010 -12.94189 -12.82214 -12.40291 -12.26959 -12.21566 -12.07632 -11.99317 -11.91408 -11.71546 -11.61294 -11.57846 -11.27712 -11.10509 -10.66924 -10.55056 -10.00036 -9.65178 -9.22670 -5.03237 -0.53343 0.37327 0.92063 1.20893 1.38913 1.52979 1.76616 1.88538 2.06742 2.29150 2.75882 3.21948 3.27903 3.30574 3.36733 3.55389 3.58612 3.61747 3.71201 3.78310 3.85868 3.90705 3.98055 4.12989 4.16071 4.18063 4.25550 4.26464 4.29848 4.33522 4.37870 4.45148 4.50126 4.59762 4.63015 4.70453 4.72417 4.78649 4.79942 4.80930 4.92711 4.94494 4.98732 5.00359 5.08480 5.09894 5.21719 5.39141 5.46749 5.55980 5.60192 5.62806 5.86168 6.36312 6.52813 6.95688 7.24561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.360 6.360 3 C 0.471 3.529 4 O -0.497 6.497 5 C -0.105 4.105 6 C -0.122 4.122 7 C 0.143 3.857 8 C -0.121 4.121 9 C -0.111 4.111 10 C -0.133 4.133 11 C 0.097 3.903 12 N -0.602 5.602 13 C 0.564 3.436 14 O -0.532 6.532 15 C -0.212 4.212 16 C -0.014 4.014 17 C -0.072 4.072 18 C -0.095 4.095 19 C -0.117 4.117 20 C -0.061 4.061 21 C -0.080 4.080 22 O -0.535 6.535 23 Si 0.684 3.316 24 C -0.094 4.094 25 C -0.092 4.092 26 H 0.063 0.937 27 H 0.102 0.898 28 H 0.063 0.937 29 H 0.126 0.874 30 H 0.102 0.898 31 H 0.084 0.916 32 H 0.081 0.919 33 H 0.112 0.888 34 H 0.089 0.911 35 H 0.086 0.914 36 H 0.079 0.921 37 H 0.089 0.911 38 H 0.079 0.921 39 H 0.074 0.926 40 H 0.130 0.870 41 H 0.138 0.862 42 H 0.132 0.868 43 H 0.130 0.870 44 H 0.078 0.922 45 H 0.381 0.619 46 H -0.261 1.261 47 H -0.255 1.255 48 H 0.129 0.871 49 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.269 0.663 -1.225 6.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.277 6.277 3 C 0.313 3.687 4 O -0.383 6.383 5 C -0.124 4.124 6 C -0.161 4.161 7 C 0.057 3.943 8 C -0.160 4.160 9 C -0.149 4.149 10 C -0.171 4.171 11 C -0.026 4.026 12 N -0.334 5.334 13 C 0.356 3.644 14 O -0.410 6.410 15 C -0.233 4.233 16 C -0.034 4.034 17 C -0.073 4.073 18 C -0.113 4.113 19 C -0.135 4.135 20 C -0.061 4.061 21 C -0.189 4.189 22 O -0.343 6.343 23 Si 0.585 3.415 24 C -0.112 4.112 25 C -0.110 4.110 26 H 0.081 0.919 27 H 0.120 0.880 28 H 0.082 0.918 29 H 0.144 0.856 30 H 0.121 0.879 31 H 0.103 0.897 32 H 0.099 0.901 33 H 0.130 0.870 34 H 0.107 0.893 35 H 0.104 0.896 36 H 0.098 0.902 37 H 0.107 0.893 38 H 0.098 0.902 39 H 0.092 0.908 40 H 0.148 0.852 41 H 0.155 0.845 42 H 0.149 0.851 43 H 0.148 0.852 44 H 0.096 0.904 45 H 0.229 0.771 46 H -0.186 1.186 47 H -0.179 1.179 48 H 0.147 0.853 49 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 5.877 0.340 -1.213 6.011 hybrid contribution -0.638 0.114 1.189 1.354 sum 5.240 0.454 -0.025 5.259 Atomic orbital electron populations 1.23287 0.76201 1.03781 1.02663 1.86501 1.23545 1.33515 1.84140 1.23434 0.91578 0.81377 0.72314 1.90690 1.66824 1.36378 1.44390 1.22322 0.87764 1.01022 1.01324 1.23312 0.98003 0.99059 0.95713 1.21887 0.94364 0.90262 0.87745 1.23350 0.97651 0.95227 0.99727 1.22452 0.91722 1.02619 0.98112 1.22819 0.98978 0.97340 0.97936 1.22450 0.79601 0.98747 1.01821 1.48161 1.07101 1.45692 1.32454 1.18014 0.85282 0.80076 0.81072 1.90855 1.15173 1.63370 1.71604 1.22882 1.00664 1.01476 0.98235 1.22409 1.00527 0.90277 0.90180 1.19045 0.93422 0.98259 0.96525 1.21312 0.94691 0.97527 0.97742 1.20927 0.99144 0.97216 0.96177 1.19416 0.93940 0.97497 0.95234 1.24852 1.12280 0.97649 0.84127 1.86595 1.81976 1.51248 1.14448 0.95029 0.74313 0.81914 0.90209 1.20974 0.94870 0.97901 0.97436 1.21444 0.99808 0.95593 0.94142 0.91860 0.87983 0.91826 0.85608 0.87922 0.89706 0.90070 0.86996 0.89261 0.89581 0.90214 0.89269 0.90225 0.90772 0.85226 0.84465 0.85074 0.85215 0.90399 0.77135 1.18586 1.17929 0.85320 0.85023 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.12 16 2 O -0.36 -1.28 10.57 -39.27 -0.41 -1.70 16 3 C 0.47 2.15 7.48 36.01 0.27 2.42 16 4 O -0.50 -3.91 15.65 -18.75 -0.29 -4.21 16 5 C -0.10 -0.14 4.06 -90.84 -0.37 -0.50 16 6 C -0.12 -0.15 6.68 -26.10 -0.17 -0.32 16 7 C 0.14 0.01 1.34 -131.27 -0.18 -0.16 16 8 C -0.12 -0.22 6.54 -26.20 -0.17 -0.39 16 9 C -0.11 0.33 6.08 -25.12 -0.15 0.18 16 10 C -0.13 0.50 7.09 -24.47 -0.17 0.32 16 11 C 0.10 -0.26 6.54 -2.39 -0.02 -0.27 16 12 N -0.60 -0.39 3.17 -157.76 -0.50 -0.89 16 13 C 0.56 1.72 7.44 -12.96 -0.10 1.62 16 14 O -0.53 -3.58 13.42 5.20 0.07 -3.51 16 15 C -0.21 -0.16 8.86 -37.50 -0.33 -0.49 16 16 C -0.01 -0.02 9.46 -37.16 -0.35 -0.37 16 17 C -0.07 -0.06 5.87 -105.06 -0.62 -0.68 16 18 C -0.09 0.01 9.41 -39.11 -0.37 -0.36 16 19 C -0.12 -0.01 8.65 -39.65 -0.34 -0.35 16 20 C -0.06 -0.06 5.39 -104.50 -0.56 -0.62 16 21 C -0.08 0.03 2.79 36.00 0.10 0.13 16 22 O -0.54 -0.54 12.81 -35.23 -0.45 -0.99 16 23 Si 0.68 -0.90 29.84 -169.99 -5.07 -5.97 16 24 C -0.09 -0.10 9.66 -39.64 -0.38 -0.48 16 25 C -0.09 -0.08 9.80 -39.11 -0.38 -0.46 16 26 H 0.06 0.08 8.13 -51.93 -0.42 -0.34 16 27 H 0.10 -0.13 8.14 -51.93 -0.42 -0.56 16 28 H 0.06 0.12 8.13 -51.93 -0.42 -0.30 16 29 H 0.13 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.10 0.44 6.50 -51.93 -0.34 0.10 16 31 H 0.08 -0.06 8.01 -51.93 -0.42 -0.47 16 32 H 0.08 0.01 8.01 -51.93 -0.42 -0.41 16 33 H 0.11 0.62 6.02 -51.92 -0.31 0.31 16 34 H 0.09 -0.35 7.85 -51.93 -0.41 -0.76 16 35 H 0.09 -0.31 8.01 -51.93 -0.42 -0.72 16 36 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 37 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 38 H 0.08 -0.30 7.16 -51.93 -0.37 -0.67 16 39 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 40 H 0.13 -0.25 4.89 -52.48 -0.26 -0.50 16 41 H 0.14 0.27 7.52 -52.48 -0.39 -0.12 16 42 H 0.13 -0.32 6.17 -52.49 -0.32 -0.65 16 43 H 0.13 -0.22 4.84 -52.48 -0.25 -0.48 16 44 H 0.08 -0.16 7.96 -51.93 -0.41 -0.57 16 45 H 0.38 -1.13 8.74 45.56 0.40 -0.73 16 46 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 47 H -0.25 -0.42 7.04 56.52 0.40 -0.02 16 48 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 49 H 0.13 -0.08 8.06 -52.49 -0.42 -0.51 16 LS Contribution 398.06 15.07 6.00 6.00 Total: 0.00 -10.57 398.06 -10.82 -21.40 By element: Atomic # 1 Polarization: -3.53 SS G_CDS: -6.93 Total: -10.45 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: -3.23 Total: 0.32 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: -0.50 Total: -0.89 kcal Atomic # 8 Polarization: -9.31 SS G_CDS: -1.09 Total: -10.40 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.07 Total: -5.97 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -10.57 -10.82 -21.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.127 kcal (2) G-P(sol) polarization free energy of solvation -10.575 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.823 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.398 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds