Wall clock time and date at job start Tue Mar 9 2021 12:59:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34223 * 116.99874 * 2 1 4 4 O 1.20826 * 120.00123 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00052 * 179.97438 * 3 2 1 6 6 C 1.53895 * 113.59521 * 179.97438 * 5 3 2 7 7 C 1.53143 * 86.89498 * 139.53849 * 6 5 3 8 8 C 1.53147 * 87.73037 * 334.91932 * 7 6 5 9 9 C 1.53751 * 114.91138 * 218.68450 * 7 6 5 10 10 C 1.55299 * 102.82763 * 208.23153 * 9 7 6 11 11 C 1.54962 * 101.66690 * 34.75078 * 10 9 7 12 12 N 1.46378 * 115.38047 * 92.02585 * 7 6 5 13 13 C 1.34777 * 125.79756 * 308.72302 * 12 7 6 14 14 O 1.21575 * 120.00280 * 5.56356 * 13 12 7 15 15 C 1.47660 * 119.99979 * 185.55990 * 13 12 7 16 16 C 1.40004 * 120.45352 * 317.03005 * 15 13 12 17 17 N 1.31311 * 121.37937 * 179.97438 * 16 15 13 18 18 C 1.32821 * 121.88611 * 359.97438 * 17 16 15 19 19 N 1.37154 * 132.96104 * 180.02562 * 18 17 16 20 20 C 1.36945 * 110.11452 * 179.97438 * 19 18 17 21 21 C 1.34181 * 109.95071 * 0.02562 * 20 19 18 22 22 C 1.50701 * 126.59871 * 180.26529 * 21 20 19 23 23 O 1.42895 * 109.47149 * 254.68666 * 22 21 20 24 24 Si 1.86308 * 109.46968 * 14.68743 * 22 21 20 25 25 C 1.41020 * 120.08662 * 0.02562 * 18 17 16 26 26 C 1.39286 * 119.61781 * 359.97438 * 25 18 17 27 27 C 1.50700 * 121.03205 * 179.97438 * 26 25 18 28 28 H 1.08994 * 109.47121 * 299.99948 * 1 2 3 29 29 H 1.09000 * 109.47223 * 60.00275 * 1 2 3 30 30 H 1.09002 * 109.47184 * 179.97438 * 1 2 3 31 31 H 1.08999 * 112.83305 * 48.86333 * 5 3 2 32 32 H 1.09000 * 113.64682 * 25.04351 * 6 5 3 33 33 H 1.09000 * 113.73036 * 254.05138 * 6 5 3 34 34 H 1.09004 * 113.64605 * 139.57573 * 8 7 6 35 35 H 1.08997 * 113.64700 * 270.57844 * 8 7 6 36 36 H 1.08996 * 110.91179 * 89.79740 * 9 7 6 37 37 H 1.08999 * 110.67889 * 326.55718 * 9 7 6 38 38 H 1.09001 * 110.98709 * 276.65997 * 10 9 7 39 39 H 1.08995 * 110.99309 * 152.84507 * 10 9 7 40 40 H 1.08992 * 110.36498 * 204.48142 * 11 10 9 41 41 H 1.09000 * 110.45384 * 82.21915 * 11 10 9 42 42 H 1.08005 * 119.31237 * 359.97438 * 16 15 13 43 43 H 0.97001 * 124.94594 * 359.95495 * 19 18 17 44 44 H 1.08003 * 125.02497 * 180.02562 * 20 19 18 45 45 H 1.09004 * 109.47097 * 134.68071 * 22 21 20 46 46 H 0.96703 * 113.99957 * 179.97438 * 23 22 21 47 47 H 1.48503 * 109.99766 * 299.99591 * 24 22 21 48 48 H 1.48497 * 110.00284 * 61.31572 * 24 22 21 49 49 H 1.08999 * 109.46999 * 95.60247 * 27 26 25 50 50 H 1.08998 * 109.47396 * 215.60552 * 27 26 25 51 51 H 1.09003 * 109.46886 * 335.60616 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1076 2.7155 -0.0001 7 6 5.1672 2.2292 0.9930 8 6 4.1907 1.1214 1.3988 9 6 5.5098 3.2247 2.1135 10 6 6.9806 2.8638 2.4575 11 6 7.5387 2.4656 1.0678 12 7 6.4228 1.7707 0.3964 13 6 6.5397 0.8712 -0.6004 14 8 5.5448 0.4412 -1.1511 15 6 7.8763 0.4080 -1.0238 16 6 8.9303 1.3184 -1.1673 17 7 10.1261 0.9263 -1.5423 18 6 10.3971 -0.3475 -1.8032 19 7 11.5371 -0.9980 -2.2012 20 6 11.2919 -2.3387 -2.3349 21 6 10.0107 -2.6020 -2.0355 22 6 9.3431 -3.9529 -2.0533 23 8 8.4984 -4.0517 -3.2016 24 14 10.6422 -5.2867 -2.1213 25 6 9.3874 -1.3244 -1.6813 26 6 8.1069 -0.9452 -1.2858 27 6 7.0039 -1.9625 -1.1459 28 1 -0.3633 0.5138 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 4.0236 0.6369 -0.7557 32 1 3.4144 3.4432 0.4218 33 1 4.5190 3.0290 -0.9596 34 1 4.6685 0.1551 1.5605 35 1 3.5206 1.4050 2.2103 36 1 4.8630 3.0751 2.9780 37 1 5.4380 4.2506 1.7522 38 1 7.0245 2.0241 3.1511 39 1 7.5110 3.7275 2.8584 40 1 8.3908 1.7952 1.1792 41 1 7.8266 3.3532 0.5044 42 1 8.7562 2.3650 -0.9654 43 1 12.3924 -0.5707 -2.3645 44 1 12.0219 -3.0752 -2.6368 45 1 8.7447 -4.0744 -1.1504 46 1 8.0358 -4.8974 -3.2780 47 1 11.4650 -5.1321 -3.3479 48 1 11.5076 -5.2147 -0.9168 49 1 6.9334 -2.2813 -0.1059 50 1 6.0579 -1.5175 -1.4544 51 1 7.2226 -2.8245 -1.7761 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:43 Heat of formation + Delta-G solvation = -15.693970 kcal Electronic energy + Delta-G solvation = -37541.013733 eV Core-core repulsion = 32795.944754 eV Total energy + Delta-G solvation = -4745.068978 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.95859 -42.43375 -40.95991 -39.58881 -38.46943 -37.76561 -37.43722 -36.49547 -35.06047 -33.05792 -32.07875 -30.89074 -29.62879 -28.84484 -28.13583 -26.85406 -26.56122 -25.49226 -24.58389 -24.10419 -23.32920 -21.98711 -21.27100 -20.42303 -19.47502 -19.00620 -18.75974 -18.43172 -18.29194 -17.72389 -17.31749 -17.12692 -17.04449 -16.87396 -16.27803 -16.10548 -15.92430 -15.45642 -15.28532 -15.18106 -15.07298 -14.71494 -14.43427 -14.32444 -14.24721 -14.13522 -13.93511 -13.81002 -13.76077 -13.52245 -13.44180 -13.27510 -12.98974 -12.97774 -12.74006 -12.63147 -12.48968 -12.20984 -12.00759 -11.97371 -11.62554 -11.55497 -11.42452 -11.06371 -11.02387 -10.79733 -10.27796 -10.11711 -9.77792 -9.57788 -9.17090 -5.09735 -0.24253 -0.04525 1.19485 1.29734 1.45707 1.55776 1.58978 1.60781 1.77634 1.86782 2.01939 2.71621 3.10236 3.28793 3.34172 3.40061 3.45951 3.50763 3.56241 3.66476 3.70646 3.76818 3.79872 3.90452 4.01197 4.05067 4.10046 4.25261 4.28558 4.32362 4.37173 4.39668 4.40943 4.44268 4.59482 4.63144 4.68719 4.70891 4.75035 4.75385 4.77854 4.80766 4.84322 4.98652 5.00620 5.01521 5.11528 5.16255 5.33216 5.35944 5.44520 5.51405 5.66680 5.74277 6.06896 6.35712 6.62812 6.83995 7.02475 7.24159 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.357 6.357 3 C 0.469 3.531 4 O -0.516 6.516 5 C -0.146 4.146 6 C -0.118 4.118 7 C 0.142 3.858 8 C -0.119 4.119 9 C -0.115 4.115 10 C -0.133 4.133 11 C 0.093 3.907 12 N -0.592 5.592 13 C 0.597 3.403 14 O -0.516 6.516 15 C -0.225 4.225 16 C 0.177 3.823 17 N -0.501 5.501 18 C 0.308 3.692 19 N -0.570 5.570 20 C 0.066 3.934 21 C -0.134 4.134 22 C -0.040 4.040 23 O -0.543 6.543 24 Si 0.686 3.314 25 C -0.144 4.144 26 C 0.080 3.920 27 C -0.146 4.146 28 H 0.061 0.939 29 H 0.062 0.938 30 H 0.101 0.899 31 H 0.192 0.808 32 H 0.104 0.896 33 H 0.079 0.921 34 H 0.082 0.918 35 H 0.094 0.906 36 H 0.088 0.912 37 H 0.085 0.915 38 H 0.079 0.921 39 H 0.089 0.911 40 H 0.083 0.917 41 H 0.078 0.922 42 H 0.167 0.833 43 H 0.426 0.574 44 H 0.177 0.823 45 H 0.075 0.925 46 H 0.381 0.619 47 H -0.251 1.251 48 H -0.255 1.255 49 H 0.076 0.924 50 H 0.102 0.898 51 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.814 -4.267 3.767 6.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.273 6.273 3 C 0.313 3.687 4 O -0.404 6.404 5 C -0.163 4.163 6 C -0.156 4.156 7 C 0.057 3.943 8 C -0.158 4.158 9 C -0.153 4.153 10 C -0.171 4.171 11 C -0.029 4.029 12 N -0.324 5.324 13 C 0.388 3.612 14 O -0.395 6.395 15 C -0.232 4.232 16 C 0.009 3.991 17 N -0.214 5.214 18 C 0.075 3.925 19 N -0.176 5.176 20 C -0.061 4.061 21 C -0.141 4.141 22 C -0.151 4.151 23 O -0.349 6.349 24 Si 0.587 3.413 25 C -0.151 4.151 26 C 0.072 3.928 27 C -0.202 4.202 28 H 0.080 0.920 29 H 0.080 0.920 30 H 0.119 0.881 31 H 0.207 0.793 32 H 0.122 0.878 33 H 0.098 0.902 34 H 0.100 0.900 35 H 0.112 0.888 36 H 0.106 0.894 37 H 0.103 0.897 38 H 0.098 0.902 39 H 0.108 0.892 40 H 0.101 0.899 41 H 0.096 0.904 42 H 0.184 0.816 43 H 0.265 0.735 44 H 0.194 0.806 45 H 0.092 0.908 46 H 0.229 0.771 47 H -0.176 1.176 48 H -0.179 1.179 49 H 0.094 0.906 50 H 0.121 0.879 51 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 5.038 -3.264 3.154 6.781 hybrid contribution -0.488 0.373 0.100 0.622 sum 4.550 -2.891 3.253 6.296 Atomic orbital electron populations 1.23268 0.76658 1.03692 1.02453 1.86545 1.23159 1.33727 1.83900 1.24019 0.92184 0.81073 0.71440 1.90638 1.67365 1.36532 1.45863 1.24072 0.86548 1.02299 1.03385 1.23180 0.96654 0.95555 1.00245 1.21442 0.84139 0.94938 0.93812 1.23165 0.97273 0.99744 0.95611 1.22519 0.96846 0.98788 0.97172 1.22824 0.95823 1.02573 0.95860 1.22640 0.89831 0.97006 0.93424 1.48077 1.07449 1.41558 1.35270 1.17625 0.88212 0.77243 0.78075 1.90166 1.36846 1.57855 1.54590 1.20249 0.95123 0.94741 1.13068 1.22680 0.85258 0.99362 0.91830 1.66494 1.22903 1.14822 1.17142 1.18477 0.86780 0.89510 0.97783 1.41459 1.11035 1.06226 1.58847 1.21625 0.97591 0.84086 1.02764 1.19522 0.92768 0.92671 1.09170 1.24029 1.00989 0.98774 0.91317 1.86555 1.62929 1.41290 1.44168 0.94941 0.79734 0.86023 0.80626 1.19406 0.93704 0.93803 1.08177 1.19737 0.92839 0.92839 0.87402 1.21301 0.97703 0.98299 1.02892 0.92030 0.91951 0.88100 0.79310 0.87800 0.90196 0.89970 0.88783 0.89381 0.89679 0.90210 0.89247 0.89896 0.90389 0.81648 0.73540 0.80606 0.90757 0.77113 1.17558 1.17896 0.90550 0.87927 0.89155 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.05 10.56 101.05 1.07 1.12 16 2 O -0.36 -1.48 10.57 -39.24 -0.41 -1.90 16 3 C 0.47 2.27 7.48 36.01 0.27 2.54 16 4 O -0.52 -3.67 15.64 -18.75 -0.29 -3.96 16 5 C -0.15 -0.42 3.61 -90.84 -0.33 -0.75 16 6 C -0.12 -0.21 6.50 -26.19 -0.17 -0.38 16 7 C 0.14 -0.02 1.44 -131.35 -0.19 -0.21 16 8 C -0.12 -0.09 6.73 -26.19 -0.18 -0.26 16 9 C -0.12 0.27 6.30 -25.12 -0.16 0.11 16 10 C -0.13 0.44 7.09 -24.48 -0.17 0.27 16 11 C 0.09 -0.22 5.29 -2.39 -0.01 -0.24 16 12 N -0.59 0.02 3.17 -157.40 -0.50 -0.48 16 13 C 0.60 1.25 6.83 -12.41 -0.08 1.16 16 14 O -0.52 -2.08 10.18 5.30 0.05 -2.03 16 15 C -0.22 -0.50 5.38 -104.82 -0.56 -1.07 16 16 C 0.18 0.28 9.13 -17.11 -0.16 0.13 16 17 N -0.50 -1.59 10.37 -11.96 -0.12 -1.71 16 18 C 0.31 0.99 8.42 -155.71 -1.31 -0.32 16 19 N -0.57 -0.43 6.04 -12.12 -0.07 -0.51 16 20 C 0.07 0.04 10.43 -16.70 -0.17 -0.14 16 21 C -0.13 -0.25 5.61 -102.73 -0.58 -0.82 16 22 C -0.04 0.03 1.87 36.01 0.07 0.10 16 23 O -0.54 0.22 11.61 -35.23 -0.41 -0.19 16 24 Si 0.69 -1.69 30.79 -169.99 -5.23 -6.93 16 25 C -0.14 -0.48 6.16 -105.13 -0.65 -1.12 16 26 C 0.08 0.23 5.97 -103.67 -0.62 -0.39 16 27 C -0.15 -0.22 9.17 36.01 0.33 0.11 16 28 H 0.06 0.08 8.13 -51.93 -0.42 -0.34 16 29 H 0.06 0.11 8.13 -51.93 -0.42 -0.32 16 30 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 31 H 0.19 0.80 4.07 -56.92 -0.23 0.57 16 32 H 0.10 0.22 7.41 -51.93 -0.38 -0.17 16 33 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 34 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 35 H 0.09 0.00 7.88 -51.93 -0.41 -0.41 16 36 H 0.09 -0.25 7.79 -51.93 -0.40 -0.65 16 37 H 0.08 -0.23 8.11 -51.93 -0.42 -0.65 16 38 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 40 H 0.08 -0.20 6.80 -51.93 -0.35 -0.55 16 41 H 0.08 -0.28 7.40 -51.93 -0.38 -0.66 16 42 H 0.17 -0.17 6.09 -52.48 -0.32 -0.49 16 43 H 0.43 -0.83 8.96 -40.82 -0.37 -1.20 16 44 H 0.18 -0.31 6.31 -52.48 -0.33 -0.64 16 45 H 0.07 -0.15 7.16 -51.93 -0.37 -0.52 16 46 H 0.38 -2.05 8.74 45.56 0.40 -1.66 16 47 H -0.25 -0.01 7.05 56.52 0.40 0.39 16 48 H -0.25 0.00 7.11 56.52 0.40 0.40 16 49 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 50 H 0.10 0.29 5.67 -51.93 -0.29 -0.01 16 51 H 0.09 0.10 4.83 -51.93 -0.25 -0.15 16 LS Contribution 398.85 15.07 6.01 6.01 Total: 0.00 -10.64 398.85 -11.30 -21.93 By element: Atomic # 1 Polarization: -3.35 SS G_CDS: -6.71 Total: -10.06 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: -3.61 Total: -0.17 kcal Atomic # 7 Polarization: -2.01 SS G_CDS: -0.70 Total: -2.70 kcal Atomic # 8 Polarization: -7.02 SS G_CDS: -1.06 Total: -8.09 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.23 Total: -6.93 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -10.64 -11.30 -21.93 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.238 kcal (2) G-P(sol) polarization free energy of solvation -10.636 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.398 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.296 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds