Wall clock time and date at job start Tue Mar 9 2021 13:01:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 C 1.53899 * 113.59596 * 279.19659 * 5 3 2 7 7 C 1.53315 * 86.83253 * 220.49086 * 6 5 3 8 8 C 1.53134 * 87.75925 * 25.01052 * 7 6 5 9 9 C 1.53740 * 114.69653 * 268.65759 * 7 6 5 10 10 C 1.55304 * 102.73562 * 251.57672 * 9 7 6 11 11 C 1.54970 * 101.66399 * 325.01831 * 10 9 7 12 12 N 1.46378 * 115.40652 * 142.16167 * 7 6 5 13 13 C 1.34771 * 125.80072 * 311.05703 * 12 7 6 14 14 O 1.21283 * 120.00300 * 0.02562 * 13 12 7 15 15 C 1.50702 * 120.00326 * 179.97438 * 13 12 7 16 16 O 1.42901 * 109.47425 * 180.02562 * 15 13 12 17 17 C 1.35905 * 116.99982 * 180.02562 * 16 15 13 18 18 C 1.38709 * 120.05380 * 179.72372 * 17 16 15 19 19 N 1.48004 * 120.02828 * 0.02562 * 18 17 16 20 20 O 1.21800 * 119.99676 * 180.02562 * 19 18 17 21 21 O 1.21798 * 120.00068 * 0.02562 * 19 18 17 22 22 C 1.38170 * 119.94172 * 179.79056 * 18 17 16 23 23 C 1.38248 * 120.05471 * 0.48369 * 22 18 17 24 24 C 1.50693 * 119.94256 * 179.72416 * 23 22 18 25 25 O 1.42902 * 109.47405 * 300.02116 * 24 23 22 26 26 Si 1.86300 * 109.47249 * 180.02562 * 24 23 22 27 27 C 1.38286 * 120.10870 * 359.74488 * 23 22 18 28 28 C 1.38122 * 120.06027 * 0.02562 * 27 23 22 29 29 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 30 30 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 31 31 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 32 32 H 1.08997 * 112.83549 * 50.33146 * 5 3 2 33 33 H 1.09003 * 113.63917 * 334.95953 * 6 5 3 34 34 H 1.08998 * 113.65031 * 105.96079 * 6 5 3 35 35 H 1.09007 * 113.64846 * 220.48724 * 8 7 6 36 36 H 1.09007 * 113.64655 * 89.49003 * 8 7 6 37 37 H 1.08997 * 110.76125 * 9.88666 * 9 7 6 38 38 H 1.09000 * 110.76188 * 133.07964 * 9 7 6 39 39 H 1.08999 * 110.98801 * 83.11076 * 10 9 7 40 40 H 1.08999 * 110.99036 * 206.88389 * 10 9 7 41 41 H 1.08998 * 110.36439 * 155.52736 * 11 10 9 42 42 H 1.09003 * 110.35896 * 277.72542 * 11 10 9 43 43 H 1.09005 * 109.46863 * 300.00025 * 15 13 12 44 44 H 1.08997 * 109.46999 * 59.99464 * 15 13 12 45 45 H 1.07993 * 119.97044 * 180.22952 * 22 18 17 46 46 H 1.09000 * 109.47340 * 60.02418 * 24 23 22 47 47 H 0.96698 * 113.99523 * 300.00038 * 25 24 23 48 48 H 1.48496 * 110.00251 * 179.97438 * 26 24 23 49 49 H 1.48496 * 110.00146 * 301.32409 * 26 24 23 50 50 H 1.08006 * 119.96780 * 180.02562 * 27 23 22 51 51 H 1.08003 * 120.03012 * 179.97438 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1927 1.0824 1.3931 7 6 5.1685 2.2030 1.0154 8 6 4.1077 2.7150 0.0369 9 6 6.4736 1.7242 0.3590 10 6 7.5278 1.9722 1.4721 11 6 6.9873 3.2655 2.1330 12 7 5.5184 3.1227 2.0991 13 6 4.6476 3.7350 2.9256 14 8 3.4567 3.5407 2.8036 15 6 5.1536 4.6602 4.0022 16 8 4.0471 5.1814 4.7412 17 6 4.3322 6.0393 5.7560 18 6 3.3059 6.5875 6.5111 19 7 1.8989 6.2384 6.2129 20 8 0.9982 6.7206 6.8760 21 8 1.6418 5.4691 5.3043 22 6 3.5986 7.4560 7.5451 23 6 4.9124 7.7865 7.8209 24 6 5.2283 8.7388 8.9452 25 8 4.6000 9.9975 8.6942 26 14 7.0726 8.9770 9.0576 27 6 5.9370 7.2449 7.0665 28 6 5.6499 6.3725 6.0348 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 4.0226 0.6566 -0.7724 33 1 3.5237 1.3432 2.2132 34 1 4.6708 0.1120 1.5271 35 1 4.5176 3.0521 -0.9153 36 1 3.4149 3.4315 0.4785 37 1 6.4154 0.6644 0.1113 38 1 6.6989 2.3150 -0.5289 39 1 7.5447 1.1474 2.1845 40 1 8.5167 2.1358 1.0439 41 1 7.3375 3.3403 3.1625 42 1 7.2981 4.1411 1.5629 43 1 5.8121 4.1098 4.6743 44 1 5.7053 5.4818 3.5453 45 1 2.8002 7.8803 8.1357 46 1 4.8571 8.3283 9.8843 47 1 4.8836 10.4217 7.8727 48 1 7.3973 9.9147 10.1623 49 1 7.7404 7.6706 9.2867 50 1 6.9626 7.5043 7.2842 51 1 6.4505 5.9501 5.4456 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15736542_4549638.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:41 Heat of formation + Delta-G solvation = -107.678746 kcal Electronic energy + Delta-G solvation = -39917.595778 eV Core-core repulsion = 34561.681135 eV Total energy + Delta-G solvation = -5355.914643 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.160 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.01583 -42.50900 -41.64088 -40.95919 -39.95800 -38.85194 -37.53574 -37.47727 -37.10307 -36.64163 -33.54506 -33.02733 -32.36566 -30.20904 -29.44496 -28.10670 -27.58826 -26.97004 -26.74415 -25.46222 -24.24411 -23.54416 -22.84519 -22.26108 -20.89691 -20.52492 -19.51712 -19.31372 -19.16709 -18.55765 -18.34598 -18.31019 -18.02389 -17.88455 -17.62637 -17.26421 -17.13184 -16.85503 -16.55282 -16.31127 -16.18725 -15.73054 -15.68054 -15.43158 -15.00572 -14.82921 -14.61465 -14.50490 -14.23021 -14.15439 -13.97747 -13.87308 -13.71585 -13.51686 -13.26502 -13.23958 -12.85625 -12.60127 -12.52155 -12.41712 -12.31231 -12.18169 -12.12550 -12.09938 -12.00610 -11.83069 -11.71512 -11.68769 -11.58237 -11.12491 -10.93669 -10.78848 -10.76610 -9.91020 -9.83866 -5.31308 -1.12835 -0.38443 0.38809 0.54112 0.96773 1.02505 1.34868 1.35243 1.41850 1.74485 1.83182 1.93333 2.08263 2.90480 2.98119 3.10510 3.14896 3.19427 3.23889 3.26725 3.41765 3.46662 3.48441 3.52211 3.55348 3.61118 3.70397 3.75156 3.88579 4.10688 4.13752 4.15105 4.15705 4.21516 4.30125 4.33191 4.41812 4.42414 4.45660 4.50069 4.59423 4.66243 4.67114 4.71447 4.75970 4.82405 4.87700 4.90045 4.94943 5.01138 5.41008 5.48124 5.59682 5.71724 6.22339 6.32525 6.95090 6.96312 6.96618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.361 6.361 3 C 0.469 3.531 4 O -0.493 6.493 5 C -0.104 4.104 6 C -0.124 4.124 7 C 0.146 3.854 8 C -0.123 4.123 9 C -0.111 4.111 10 C -0.132 4.132 11 C 0.092 3.908 12 N -0.604 5.604 13 C 0.529 3.471 14 O -0.484 6.484 15 C 0.036 3.964 16 O -0.253 6.253 17 C 0.200 3.800 18 C -0.075 4.075 19 N 0.028 4.972 20 O -0.177 6.177 21 O -0.117 6.117 22 C 0.009 3.991 23 C -0.158 4.158 24 C -0.066 4.066 25 O -0.535 6.535 26 Si 0.693 3.307 27 C -0.025 4.025 28 C -0.209 4.209 29 H 0.065 0.935 30 H 0.063 0.937 31 H 0.102 0.898 32 H 0.127 0.873 33 H 0.103 0.897 34 H 0.086 0.914 35 H 0.082 0.918 36 H 0.113 0.887 37 H 0.091 0.909 38 H 0.087 0.913 39 H 0.081 0.919 40 H 0.090 0.910 41 H 0.078 0.922 42 H 0.077 0.923 43 H 0.100 0.900 44 H 0.102 0.898 45 H 0.165 0.835 46 H 0.121 0.879 47 H 0.381 0.619 48 H -0.248 1.248 49 H -0.254 1.254 50 H 0.149 0.851 51 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.998 -1.061 -2.519 14.262 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.277 6.277 3 C 0.311 3.689 4 O -0.379 6.379 5 C -0.123 4.123 6 C -0.162 4.162 7 C 0.061 3.939 8 C -0.161 4.161 9 C -0.148 4.148 10 C -0.170 4.170 11 C -0.031 4.031 12 N -0.340 5.340 13 C 0.315 3.685 14 O -0.356 6.356 15 C -0.042 4.042 16 O -0.162 6.162 17 C 0.150 3.850 18 C -0.160 4.160 19 N 0.548 4.452 20 O -0.385 6.385 21 O -0.341 6.341 22 C -0.010 4.010 23 C -0.159 4.159 24 C -0.176 4.176 25 O -0.341 6.341 26 Si 0.593 3.407 27 C -0.043 4.043 28 C -0.228 4.228 29 H 0.083 0.917 30 H 0.082 0.918 31 H 0.120 0.880 32 H 0.145 0.855 33 H 0.122 0.878 34 H 0.105 0.895 35 H 0.101 0.899 36 H 0.131 0.869 37 H 0.110 0.890 38 H 0.106 0.894 39 H 0.099 0.901 40 H 0.109 0.891 41 H 0.096 0.904 42 H 0.095 0.905 43 H 0.118 0.882 44 H 0.119 0.881 45 H 0.182 0.818 46 H 0.138 0.862 47 H 0.229 0.771 48 H -0.173 1.173 49 H -0.179 1.179 50 H 0.166 0.834 51 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 13.912 -0.898 -1.323 14.003 hybrid contribution -0.864 -0.394 0.093 0.954 sum 13.048 -1.292 -1.230 13.170 Atomic orbital electron populations 1.23300 0.76065 1.03794 1.02790 1.86488 1.23648 1.33447 1.84151 1.23377 0.91514 0.81468 0.72534 1.90712 1.66764 1.36331 1.44125 1.22296 0.88009 1.00841 1.01196 1.23330 0.97927 0.99008 0.95958 1.21947 0.94576 0.90066 0.87321 1.23367 0.97536 0.95451 0.99735 1.22460 0.91449 1.02859 0.98073 1.22807 0.99096 0.97048 0.98006 1.22523 0.79424 0.99360 1.01779 1.48154 1.06978 1.46152 1.32750 1.19442 0.86214 0.81061 0.81822 1.90889 1.14662 1.60608 1.69398 1.22705 0.88893 0.98426 0.94216 1.86503 1.32709 1.55925 1.41110 1.18696 0.92108 0.87688 0.86461 1.20594 0.80971 1.09652 1.04752 1.43343 1.02318 0.99529 0.99996 1.94555 1.38815 1.55695 1.49478 1.94710 1.89103 1.28921 1.21369 1.20839 0.98411 0.89994 0.91712 1.20315 0.92086 1.02610 1.00919 1.25097 1.10998 0.84173 0.97355 1.86562 1.69166 1.31972 1.46381 0.94895 0.74221 0.82692 0.88844 1.21260 0.99547 0.91987 0.91474 1.21259 0.94091 1.04581 1.02917 0.91672 0.91843 0.87986 0.85538 0.87819 0.89538 0.89895 0.86895 0.89017 0.89422 0.90078 0.89098 0.90388 0.90470 0.88227 0.88065 0.81802 0.86171 0.77122 1.17269 1.17917 0.83405 0.82677 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.06 10.56 101.05 1.07 1.12 16 2 O -0.36 -1.28 10.57 -39.27 -0.41 -1.69 16 3 C 0.47 2.08 7.48 36.01 0.27 2.35 16 4 O -0.49 -3.97 15.65 -18.75 -0.29 -4.26 16 5 C -0.10 -0.07 4.06 -90.84 -0.37 -0.44 16 6 C -0.12 -0.03 6.68 -26.10 -0.17 -0.21 16 7 C 0.15 -0.19 1.34 -131.27 -0.18 -0.37 16 8 C -0.12 -0.11 6.54 -26.20 -0.17 -0.28 16 9 C -0.11 0.50 6.08 -25.12 -0.15 0.35 16 10 C -0.13 0.75 7.09 -24.47 -0.17 0.58 16 11 C 0.09 -0.48 6.71 -2.39 -0.02 -0.50 16 12 N -0.60 0.87 3.17 -156.15 -0.49 0.38 16 13 C 0.53 0.76 7.59 -10.99 -0.08 0.67 16 14 O -0.48 -3.22 13.69 -14.36 -0.20 -3.42 16 15 C 0.04 -0.06 4.24 36.01 0.15 0.09 16 16 O -0.25 -0.67 7.68 -49.80 -0.38 -1.06 16 17 C 0.20 0.20 6.67 -39.22 -0.26 -0.07 16 18 C -0.08 -0.23 6.87 -79.81 -0.55 -0.78 16 19 N 0.03 0.20 4.45 34.03 0.15 0.35 16 20 O -0.18 -1.37 18.45 -29.46 -0.54 -1.91 16 21 O -0.12 -1.09 17.24 -36.49 -0.63 -1.72 16 22 C 0.01 0.01 9.11 -39.60 -0.36 -0.35 16 23 C -0.16 0.32 5.39 -104.60 -0.56 -0.25 16 24 C -0.07 0.16 2.82 36.00 0.10 0.26 16 25 O -0.54 0.82 12.77 -35.23 -0.45 0.37 16 26 Si 0.69 -2.64 29.78 -169.99 -5.06 -7.71 16 27 C -0.02 0.10 8.66 -39.61 -0.34 -0.25 16 28 C -0.21 0.67 9.04 -39.43 -0.36 0.31 16 29 H 0.06 0.16 8.13 -51.93 -0.42 -0.26 16 30 H 0.06 0.10 8.13 -51.93 -0.42 -0.32 16 31 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.13 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.10 0.37 6.50 -51.93 -0.34 0.04 16 34 H 0.09 -0.15 8.01 -51.93 -0.42 -0.57 16 35 H 0.08 -0.07 8.01 -51.93 -0.42 -0.49 16 36 H 0.11 0.55 6.03 -51.92 -0.31 0.24 16 37 H 0.09 -0.48 7.85 -51.93 -0.41 -0.89 16 38 H 0.09 -0.45 8.01 -51.93 -0.42 -0.86 16 39 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 40 H 0.09 -0.63 8.14 -51.93 -0.42 -1.05 16 41 H 0.08 -0.55 7.50 -51.93 -0.39 -0.94 16 42 H 0.08 -0.48 8.14 -51.93 -0.42 -0.91 16 43 H 0.10 -0.49 7.38 -51.93 -0.38 -0.87 16 44 H 0.10 -0.50 7.66 -51.93 -0.40 -0.90 16 45 H 0.16 0.13 7.61 -52.49 -0.40 -0.27 16 46 H 0.12 -0.24 7.96 -51.93 -0.41 -0.66 16 47 H 0.38 -2.11 8.70 45.56 0.40 -1.71 16 48 H -0.25 0.01 7.11 56.52 0.40 0.41 16 49 H -0.25 0.52 7.11 56.52 0.40 0.92 16 50 H 0.15 -0.98 4.88 -52.48 -0.26 -1.24 16 51 H 0.16 -1.05 6.30 -52.48 -0.33 -1.38 16 LS Contribution 423.96 15.07 6.39 6.39 Total: 0.00 -15.11 423.96 -10.72 -25.83 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -6.64 Total: -13.81 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: -2.16 Total: 2.25 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.34 Total: 0.73 kcal Atomic # 8 Polarization: -10.77 SS G_CDS: -2.91 Total: -13.68 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: -5.06 Total: -7.71 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -15.11 -10.72 -25.83 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_4549638.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.849 kcal (2) G-P(sol) polarization free energy of solvation -15.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.722 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds