Wall clock time and date at job start Tue Mar 9 2021 13:02:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 C 1.53899 * 113.59596 * 279.19659 * 5 3 2 7 7 C 1.53315 * 86.83253 * 220.49086 * 6 5 3 8 8 C 1.53134 * 87.75925 * 25.01052 * 7 6 5 9 9 C 1.53740 * 114.69653 * 268.65759 * 7 6 5 10 10 C 1.55304 * 102.73562 * 251.57672 * 9 7 6 11 11 C 1.54970 * 101.66399 * 325.01831 * 10 9 7 12 12 N 1.46378 * 115.40652 * 142.16167 * 7 6 5 13 13 C 1.34771 * 125.80072 * 311.05703 * 12 7 6 14 14 O 1.21283 * 120.00300 * 0.02562 * 13 12 7 15 15 C 1.50702 * 120.00326 * 179.97438 * 13 12 7 16 16 O 1.42901 * 109.47425 * 180.02562 * 15 13 12 17 17 C 1.35919 * 116.99905 * 180.02562 * 16 15 13 18 18 C 1.38789 * 120.05669 * 180.02562 * 17 16 15 19 19 Br 1.89100 * 120.03702 * 0.02562 * 18 17 16 20 20 C 1.38238 * 119.92527 * 179.97438 * 18 17 16 21 21 C 1.38240 * 120.04904 * 359.97438 * 20 18 17 22 22 C 1.50699 * 119.94249 * 179.97438 * 21 20 18 23 23 O 1.42899 * 109.46881 * 65.00506 * 22 21 20 24 24 Si 1.86302 * 109.47039 * 184.99828 * 22 21 20 25 25 C 1.38285 * 120.11626 * 359.97438 * 21 20 18 26 26 C 1.38146 * 120.07007 * 359.76460 * 25 21 20 27 27 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 29 29 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 30 30 H 1.08997 * 112.83549 * 50.33146 * 5 3 2 31 31 H 1.09003 * 113.63917 * 334.95953 * 6 5 3 32 32 H 1.08998 * 113.65031 * 105.96079 * 6 5 3 33 33 H 1.09007 * 113.64846 * 220.48724 * 8 7 6 34 34 H 1.09007 * 113.64655 * 89.49003 * 8 7 6 35 35 H 1.08997 * 110.76125 * 9.88666 * 9 7 6 36 36 H 1.09000 * 110.76188 * 133.07964 * 9 7 6 37 37 H 1.08999 * 110.98801 * 83.11076 * 10 9 7 38 38 H 1.08999 * 110.99036 * 206.88389 * 10 9 7 39 39 H 1.08998 * 110.36439 * 155.52736 * 11 10 9 40 40 H 1.09003 * 110.35896 * 277.72542 * 11 10 9 41 41 H 1.09005 * 109.46863 * 300.00025 * 15 13 12 42 42 H 1.08997 * 109.46999 * 59.99464 * 15 13 12 43 43 H 1.08004 * 119.97589 * 179.97438 * 20 18 17 44 44 H 1.08993 * 109.47498 * 305.00249 * 22 21 20 45 45 H 0.96701 * 114.00201 * 179.97438 * 23 22 21 46 46 H 1.48491 * 110.00326 * 300.00611 * 24 22 21 47 47 H 1.48500 * 109.99547 * 61.32592 * 24 22 21 48 48 H 1.07999 * 119.96427 * 180.02562 * 25 21 20 49 49 H 1.08001 * 120.02037 * 180.25804 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.1927 1.0824 1.3931 7 6 5.1685 2.2030 1.0154 8 6 4.1077 2.7150 0.0369 9 6 6.4736 1.7242 0.3590 10 6 7.5278 1.9722 1.4721 11 6 6.9873 3.2655 2.1330 12 7 5.5184 3.1227 2.0991 13 6 4.6476 3.7350 2.9256 14 8 3.4567 3.5407 2.8036 15 6 5.1536 4.6602 4.0022 16 8 4.0471 5.1814 4.7412 17 6 4.3322 6.0393 5.7561 18 6 3.3058 6.5831 6.5158 19 35 1.5085 6.1307 6.1404 20 6 3.5989 7.4550 7.5477 21 6 4.9128 7.7846 7.8233 22 6 5.2296 8.7358 8.9484 23 8 4.8478 8.1457 10.1927 24 14 7.0583 9.0911 8.9650 25 6 5.9371 7.2431 7.0683 26 6 5.6500 6.3672 6.0394 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 4.0226 0.6566 -0.7724 31 1 3.5237 1.3432 2.2132 32 1 4.6708 0.1120 1.5271 33 1 4.5176 3.0521 -0.9153 34 1 3.4149 3.4315 0.4785 35 1 6.4154 0.6644 0.1113 36 1 6.6989 2.3150 -0.5289 37 1 7.5447 1.1474 2.1845 38 1 8.5167 2.1358 1.0439 39 1 7.3375 3.3403 3.1625 40 1 7.2981 4.1411 1.5629 41 1 5.8121 4.1098 4.6743 42 1 5.7053 5.4818 3.5453 43 1 2.8008 7.8789 8.1391 44 1 4.6800 9.6659 8.8036 45 1 5.0234 8.7035 10.9628 46 1 7.8188 7.8310 9.1618 47 1 7.4623 9.7341 7.6889 48 1 6.9627 7.5021 7.2860 49 1 6.4508 5.9415 5.4529 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15736542_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:10 Heat of formation + Delta-G solvation = -107.168908 kcal Electronic energy + Delta-G solvation = -35124.208706 eV Core-core repulsion = 30259.514604 eV Total energy + Delta-G solvation = -4864.694102 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 440.076 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.57241 -41.73964 -41.17454 -39.74821 -38.78761 -37.74472 -37.28001 -36.73855 -33.81772 -32.91195 -32.14390 -30.69188 -30.04572 -29.40546 -28.07211 -27.05149 -26.41254 -25.42544 -24.31922 -23.41334 -22.50022 -22.10123 -20.99872 -19.89814 -19.32328 -18.82364 -18.41843 -18.05956 -18.03027 -17.72250 -17.52502 -17.37003 -16.85251 -16.69142 -16.27302 -15.97732 -15.75596 -15.53827 -15.45039 -14.98202 -14.75592 -14.53475 -14.35485 -14.27966 -14.20350 -14.08528 -13.95763 -13.75546 -13.58649 -13.43044 -13.40358 -12.99975 -12.66964 -12.40001 -12.36714 -12.22681 -12.14592 -12.03667 -12.00683 -11.94676 -11.94628 -11.93533 -11.50591 -11.41195 -11.33494 -10.89823 -10.31889 -10.13147 -9.80549 -9.47786 -4.90363 -0.26347 -0.04909 0.48344 1.00371 1.17948 1.31611 1.32037 1.65532 1.68255 1.95926 2.19360 2.26486 3.09152 3.20701 3.27235 3.30734 3.44540 3.49423 3.50297 3.55589 3.72934 3.76795 3.87090 3.87964 3.88492 3.92630 4.07190 4.15885 4.16627 4.18030 4.18812 4.37239 4.39659 4.50096 4.50204 4.57405 4.62058 4.67205 4.67958 4.75348 4.76970 4.82371 4.90405 4.93616 5.05253 5.06794 5.16253 5.25095 5.29493 5.33044 5.45266 5.89572 6.30015 6.59243 6.91078 6.93476 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.464 3.536 4 O -0.542 6.542 5 C -0.099 4.099 6 C -0.124 4.124 7 C 0.150 3.850 8 C -0.129 4.129 9 C -0.105 4.105 10 C -0.125 4.125 11 C 0.082 3.918 12 N -0.601 5.601 13 C 0.522 3.478 14 O -0.556 6.556 15 C 0.038 3.962 16 O -0.302 6.302 17 C 0.148 3.852 18 C -0.141 4.141 19 Br -0.046 7.046 20 C -0.030 4.030 21 C -0.118 4.118 22 C -0.082 4.082 23 O -0.566 6.566 24 Si 0.778 3.222 25 C -0.074 4.074 26 C -0.190 4.190 27 H 0.135 0.865 28 H 0.050 0.950 29 H 0.062 0.938 30 H 0.166 0.834 31 H 0.061 0.939 32 H 0.111 0.889 33 H 0.101 0.899 34 H 0.064 0.936 35 H 0.108 0.892 36 H 0.099 0.901 37 H 0.081 0.919 38 H 0.112 0.888 39 H 0.098 0.902 40 H 0.091 0.909 41 H 0.125 0.875 42 H 0.125 0.875 43 H 0.148 0.852 44 H 0.093 0.907 45 H 0.404 0.596 46 H -0.287 1.287 47 H -0.281 1.281 48 H 0.141 0.859 49 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.257 0.280 0.682 13.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.308 3.692 4 O -0.431 6.431 5 C -0.118 4.118 6 C -0.162 4.162 7 C 0.064 3.936 8 C -0.168 4.168 9 C -0.142 4.142 10 C -0.163 4.163 11 C -0.039 4.039 12 N -0.334 5.334 13 C 0.310 3.690 14 O -0.433 6.433 15 C -0.039 4.039 16 O -0.215 6.215 17 C 0.100 3.900 18 C -0.221 4.221 19 Br 0.040 6.960 20 C -0.050 4.050 21 C -0.120 4.120 22 C -0.191 4.191 23 O -0.376 6.376 24 Si 0.682 3.318 25 C -0.092 4.092 26 C -0.209 4.209 27 H 0.153 0.847 28 H 0.069 0.931 29 H 0.081 0.919 30 H 0.183 0.817 31 H 0.080 0.920 32 H 0.130 0.870 33 H 0.119 0.881 34 H 0.083 0.917 35 H 0.126 0.874 36 H 0.118 0.882 37 H 0.100 0.900 38 H 0.130 0.870 39 H 0.116 0.884 40 H 0.109 0.891 41 H 0.143 0.857 42 H 0.142 0.858 43 H 0.166 0.834 44 H 0.111 0.889 45 H 0.255 0.745 46 H -0.214 1.214 47 H -0.208 1.208 48 H 0.159 0.841 49 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges 12.052 -0.353 -0.285 12.060 hybrid contribution -1.218 0.111 -0.167 1.234 sum 10.834 -0.242 -0.452 10.846 Atomic orbital electron populations 1.23506 0.75314 1.05704 1.02046 1.86498 1.24579 1.32996 1.83698 1.24246 0.93067 0.80954 0.70913 1.90679 1.68086 1.37819 1.46547 1.22566 0.85414 1.01300 1.02549 1.23253 0.97846 1.00877 0.94223 1.22091 0.95608 0.89055 0.86819 1.23291 0.97772 0.94735 1.00956 1.22538 0.89316 1.03888 0.98501 1.22840 0.99585 0.96385 0.97482 1.22886 0.76746 1.00592 1.03677 1.48291 1.08550 1.44940 1.31662 1.20100 0.85677 0.80939 0.82291 1.90814 1.17549 1.63333 1.71623 1.22802 0.88646 0.98740 0.93710 1.86254 1.34608 1.57802 1.42801 1.18752 0.93108 0.90147 0.87982 1.21339 0.90736 1.07067 1.03001 1.96765 1.11015 1.93145 1.95116 1.20965 0.97702 0.93355 0.92935 1.19667 0.92626 1.01085 0.98579 1.24907 1.14065 0.96225 0.83900 1.86453 1.87466 1.47997 1.15685 0.94000 0.71840 0.81220 0.84770 1.21082 0.98922 0.94741 0.94446 1.21436 0.94500 1.02937 1.01995 0.84728 0.93128 0.91927 0.81678 0.91993 0.87032 0.88101 0.91686 0.87398 0.88207 0.90027 0.86974 0.88380 0.89071 0.85706 0.85776 0.83390 0.88935 0.74451 1.21399 1.20824 0.84143 0.80794 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.14 10.56 113.37 1.20 1.33 16 2 O -0.36 -3.19 10.57 -51.46 -0.54 -3.73 16 3 C 0.46 5.42 7.48 71.24 0.53 5.95 16 4 O -0.54 -11.00 15.65 21.98 0.34 -10.66 16 5 C -0.10 -0.28 4.06 -10.94 -0.04 -0.33 16 6 C -0.12 -0.30 6.68 31.00 0.21 -0.09 16 7 C 0.15 -0.20 1.34 4.02 0.01 -0.20 16 8 C -0.13 -0.56 6.54 30.94 0.20 -0.36 16 9 C -0.10 1.07 6.08 31.63 0.19 1.26 16 10 C -0.13 1.58 7.09 32.06 0.23 1.81 16 11 C 0.08 -0.84 6.71 86.84 0.58 -0.25 16 12 N -0.60 0.44 3.17 -766.33 -2.43 -1.99 16 13 C 0.52 3.54 7.59 87.66 0.67 4.20 16 14 O -0.56 -10.29 13.69 16.00 0.22 -10.07 16 15 C 0.04 0.02 4.24 71.24 0.30 0.32 16 16 O -0.30 -2.98 9.01 -73.60 -0.66 -3.64 16 17 C 0.15 1.13 6.68 22.52 0.15 1.29 16 18 C -0.14 -1.42 6.24 22.40 0.14 -1.28 16 19 Br -0.05 -0.59 33.16 -20.37 -0.68 -1.27 16 20 C -0.03 -0.21 9.42 22.27 0.21 0.00 16 21 C -0.12 -0.48 5.38 -19.85 -0.11 -0.59 16 22 C -0.08 0.15 2.79 71.24 0.20 0.35 16 23 O -0.57 0.51 12.81 -148.98 -1.91 -1.39 16 24 Si 0.78 -3.88 29.85 68.60 2.05 -1.83 16 25 C -0.07 -0.17 8.66 22.26 0.19 0.02 16 26 C -0.19 -0.26 9.04 22.36 0.20 -0.06 16 27 H 0.13 -0.28 8.14 -2.38 -0.02 -0.30 16 28 H 0.05 0.39 8.13 -2.39 -0.02 0.37 16 29 H 0.06 0.32 8.13 -2.39 -0.02 0.30 16 30 H 0.17 -0.87 8.14 -2.39 -0.02 -0.89 16 31 H 0.06 0.72 6.50 -2.39 -0.02 0.70 16 32 H 0.11 -0.36 8.01 -2.39 -0.02 -0.38 16 33 H 0.10 -0.04 8.01 -2.38 -0.02 -0.06 16 34 H 0.06 0.97 6.03 -2.38 -0.01 0.96 16 35 H 0.11 -1.39 7.85 -2.39 -0.02 -1.41 16 36 H 0.10 -1.20 8.01 -2.39 -0.02 -1.21 16 37 H 0.08 -0.98 8.14 -2.39 -0.02 -1.00 16 38 H 0.11 -1.80 8.14 -2.39 -0.02 -1.82 16 39 H 0.10 -1.36 7.50 -2.39 -0.02 -1.38 16 40 H 0.09 -1.14 8.14 -2.39 -0.02 -1.16 16 41 H 0.13 -0.76 7.37 -2.38 -0.02 -0.78 16 42 H 0.12 -0.72 7.67 -2.39 -0.02 -0.74 16 43 H 0.15 0.76 8.06 -2.91 -0.02 0.73 16 44 H 0.09 -0.49 7.96 -2.39 -0.02 -0.51 16 45 H 0.40 -4.65 8.74 -74.06 -0.65 -5.29 16 46 H -0.29 -0.32 7.04 99.48 0.70 0.38 16 47 H -0.28 0.11 7.11 99.48 0.71 0.82 16 48 H 0.14 -0.12 4.86 -2.91 -0.01 -0.14 16 49 H 0.17 -1.18 6.30 -2.91 -0.02 -1.20 16 Total: 0.00 -37.03 418.47 1.84 -35.19 By element: Atomic # 1 Polarization: -14.39 SS G_CDS: 0.39 Total: -14.00 kcal Atomic # 6 Polarization: 8.33 SS G_CDS: 5.06 Total: 13.39 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -2.43 Total: -1.99 kcal Atomic # 8 Polarization: -26.94 SS G_CDS: -2.55 Total: -29.50 kcal Atomic # 14 Polarization: -3.88 SS G_CDS: 2.05 Total: -1.83 kcal Atomic # 35 Polarization: -0.59 SS G_CDS: -0.68 Total: -1.27 kcal Total: -37.03 1.84 -35.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15736542_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.974 kcal (2) G-P(sol) polarization free energy of solvation -37.033 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.838 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.195 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds