Wall clock time and date at job start Tue Mar 9 2021 13:08:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.35534 * 125.67836 * 2 1 4 4 C 1.35444 * 108.87395 * 179.97438 * 3 2 1 5 5 C 1.50704 * 126.06720 * 180.02562 * 4 3 2 6 6 O 1.42901 * 109.47361 * 120.02436 * 5 4 3 7 7 Si 1.86303 * 109.47062 * 0.02562 * 5 4 3 8 8 C 1.39834 * 107.86591 * 0.25916 * 4 3 2 9 9 C 1.37647 * 125.67721 * 179.97438 * 2 1 3 10 10 C 1.46671 * 126.23731 * 0.03547 * 9 2 1 11 11 O 1.21695 * 119.99979 * 5.28622 * 10 9 2 12 12 N 1.34781 * 120.00390 * 185.28284 * 10 9 2 13 13 C 1.46503 * 120.00257 * 185.21384 * 12 10 9 14 14 H 1.08998 * 112.84856 * 23.79920 * 13 12 10 15 15 C 1.53777 * 113.61575 * 155.00193 * 13 12 10 16 16 C 1.53775 * 87.08075 * 139.97749 * 15 13 12 17 17 H 1.09005 * 113.61465 * 89.11243 * 16 15 13 18 18 C 1.53002 * 113.61454 * 219.93004 * 16 15 13 19 19 F 1.39903 * 109.47187 * 184.99902 * 18 16 15 20 20 C 1.53779 * 113.60981 * 252.49952 * 13 12 10 21 21 H 1.09000 * 109.47065 * 85.93292 * 1 2 3 22 22 H 1.08998 * 109.47304 * 205.92881 * 1 2 3 23 23 H 1.08994 * 109.47225 * 325.93493 * 1 2 3 24 24 H 1.07999 * 125.56136 * 359.97255 * 3 2 1 25 25 H 1.09003 * 109.47088 * 240.02290 * 5 4 3 26 26 H 0.96698 * 113.99916 * 180.02562 * 6 5 4 27 27 H 1.48501 * 110.00008 * 298.68094 * 7 5 4 28 28 H 1.48495 * 109.99724 * 60.00420 * 7 5 4 29 29 H 1.08001 * 126.45679 * 179.73744 * 8 4 3 30 30 H 0.97002 * 119.99690 * 5.21438 * 12 10 9 31 31 H 1.09004 * 113.61222 * 254.52935 * 15 13 12 32 32 H 1.09004 * 113.61433 * 25.34545 * 15 13 12 33 33 H 1.08998 * 109.47119 * 305.00531 * 18 16 15 34 34 H 1.09002 * 109.46720 * 65.00373 * 18 16 15 35 35 H 1.09004 * 113.61697 * 334.56196 * 20 13 12 36 36 H 1.09005 * 113.61691 * 105.46826 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5521 0.7094 0.0006 5 6 4.7536 1.6190 0.0013 6 8 5.5398 1.3689 1.1681 7 14 4.1885 3.3943 0.0021 8 6 3.5780 -0.6887 -0.0051 9 6 2.2678 -1.1181 0.0005 10 6 1.8125 -2.5124 0.0004 11 8 0.6261 -2.7650 -0.0973 12 7 2.7080 -3.5138 0.1084 13 6 2.2672 -4.9063 -0.0063 14 1 1.3380 -5.0113 -0.5662 15 6 3.3758 -5.8675 -0.4665 16 6 2.8164 -6.8750 0.5516 17 1 2.0367 -7.5193 0.1452 18 6 3.8990 -7.6533 1.3020 19 9 3.2988 -8.6190 2.1172 20 6 2.2722 -5.6660 1.3308 21 1 -0.3633 0.0729 -1.0251 22 1 -0.3634 -0.9242 0.4493 23 1 -0.3633 0.8513 0.5756 24 1 1.9082 2.1236 -0.0004 25 1 5.3537 1.4291 -0.8886 26 1 6.3311 1.9206 1.2349 27 1 3.3966 3.6757 -1.2222 28 1 3.3695 3.6659 1.2106 29 1 4.4584 -1.3143 -0.0101 30 1 3.6444 -3.3126 0.2621 31 1 3.2717 -6.1900 -1.5025 32 1 4.3814 -5.5191 -0.2307 33 1 4.5583 -8.1420 0.5847 34 1 4.4786 -6.9665 1.9189 35 1 2.9760 -5.2633 2.0592 36 1 1.2770 -5.8259 1.7458 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_10803934.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:38 Heat of formation + Delta-G solvation = -42.269929 kcal Electronic energy + Delta-G solvation = -20363.891497 eV Core-core repulsion = 16958.749978 eV Total energy + Delta-G solvation = -3405.141519 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.54715 -42.70017 -40.94268 -39.24007 -37.59728 -35.12731 -33.94305 -31.25952 -29.25878 -28.42186 -26.77092 -25.80307 -24.69372 -22.74909 -21.39064 -21.00516 -20.26095 -18.71886 -18.20904 -17.69561 -17.18772 -16.96918 -16.87785 -16.68458 -15.96720 -15.82905 -15.56460 -15.30108 -15.03889 -14.94024 -14.49318 -14.16665 -13.71532 -13.66672 -13.48774 -13.34614 -13.24583 -12.90312 -12.51285 -12.44566 -12.06710 -11.95976 -11.52145 -11.33146 -11.15060 -10.26616 -10.21608 -9.77483 -9.41343 -4.91834 0.24139 1.28692 1.42463 1.47846 1.72480 2.04670 2.15081 2.21281 3.33605 3.38945 3.51589 3.58287 3.65509 3.70538 3.73574 3.92168 4.01841 4.09662 4.18412 4.22240 4.27170 4.32742 4.52545 4.56619 4.58584 4.67512 4.70952 4.75437 4.78182 4.95904 5.01562 5.04944 5.21359 5.43804 5.55602 5.75620 5.94962 6.37519 7.01227 7.04305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.414 5.414 3 C 0.006 3.994 4 C -0.180 4.180 5 C -0.040 4.040 6 O -0.566 6.566 7 Si 0.774 3.226 8 C -0.106 4.106 9 C -0.075 4.075 10 C 0.588 3.412 11 O -0.583 6.583 12 N -0.693 5.693 13 C 0.119 3.881 14 H 0.098 0.902 15 C -0.118 4.118 16 C -0.139 4.139 17 H 0.100 0.900 18 C 0.066 3.934 19 F -0.241 7.241 20 C -0.149 4.149 21 H 0.086 0.914 22 H 0.091 0.909 23 H 0.103 0.897 24 H 0.173 0.827 25 H 0.091 0.909 26 H 0.401 0.599 27 H -0.290 1.290 28 H -0.300 1.300 29 H 0.170 0.830 30 H 0.418 0.582 31 H 0.090 0.910 32 H 0.115 0.885 33 H 0.096 0.904 34 H 0.092 0.908 35 H 0.097 0.903 36 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.961 3.208 -2.235 7.984 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.086 5.086 3 C -0.130 4.130 4 C -0.187 4.187 5 C -0.151 4.151 6 O -0.375 6.375 7 Si 0.680 3.320 8 C -0.132 4.132 9 C -0.188 4.188 10 C 0.377 3.623 11 O -0.466 6.466 12 N -0.343 5.343 13 C 0.014 3.986 14 H 0.116 0.884 15 C -0.156 4.156 16 C -0.159 4.159 17 H 0.118 0.882 18 C 0.012 3.988 19 F -0.222 7.222 20 C -0.187 4.187 21 H 0.104 0.896 22 H 0.110 0.890 23 H 0.122 0.878 24 H 0.190 0.810 25 H 0.109 0.891 26 H 0.252 0.748 27 H -0.217 1.217 28 H -0.228 1.228 29 H 0.188 0.812 30 H 0.256 0.744 31 H 0.109 0.891 32 H 0.133 0.867 33 H 0.115 0.885 34 H 0.110 0.890 35 H 0.116 0.884 36 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 4.568 3.064 -2.207 5.927 hybrid contribution -0.394 -0.400 0.100 0.570 sum 4.174 2.664 -2.107 5.382 Atomic orbital electron populations 1.22431 0.74869 1.05840 1.04761 1.43981 1.07674 1.04772 1.52189 1.21963 0.90734 0.91833 1.08478 1.19184 0.92916 0.94743 1.11846 1.24084 0.92419 1.07433 0.91125 1.86440 1.41680 1.66802 1.42619 0.94324 0.85086 0.76617 0.75962 1.21483 0.94507 0.94640 1.02570 1.20242 0.90991 0.87635 1.19928 1.17156 0.85454 0.84132 0.75532 1.90774 1.17696 1.85299 1.52782 1.45544 1.11571 1.05025 1.72187 1.22561 0.99709 0.78354 0.97941 0.88415 1.23293 0.99006 0.93274 1.00032 1.22941 0.99287 0.95770 0.97873 0.88205 1.22245 0.94666 0.88933 0.93005 1.92739 1.86331 1.67063 1.76101 1.23595 1.02136 0.95758 0.97252 0.89581 0.89014 0.87802 0.81018 0.89148 0.74817 1.21694 1.22799 0.81226 0.74428 0.89101 0.86655 0.88547 0.89006 0.88436 0.92294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.20 10.64 127.77 1.36 1.56 16 2 N -0.41 -2.90 3.16 -534.33 -1.69 -4.59 16 3 C 0.01 0.04 9.94 83.48 0.83 0.87 16 4 C -0.18 -0.83 5.47 -20.12 -0.11 -0.94 16 5 C -0.04 0.06 3.01 71.24 0.21 0.27 16 6 O -0.57 0.75 12.86 -148.98 -1.92 -1.16 16 7 Si 0.77 -2.38 30.59 68.60 2.10 -0.29 16 8 C -0.11 -0.40 10.28 22.57 0.23 -0.17 16 9 C -0.07 -0.53 6.88 40.35 0.28 -0.25 16 10 C 0.59 4.55 7.77 86.44 0.67 5.22 16 11 O -0.58 -8.37 14.29 -4.33 -0.06 -8.43 16 12 N -0.69 -0.14 5.33 -444.00 -2.37 -2.50 16 13 C 0.12 -0.07 4.21 45.52 0.19 0.12 16 14 H 0.10 0.38 7.53 -2.39 -0.02 0.36 16 15 C -0.12 0.81 7.39 31.12 0.23 1.04 16 16 C -0.14 0.52 4.09 -10.27 -0.04 0.47 16 17 H 0.10 -0.21 8.14 -2.38 -0.02 -0.23 16 18 C 0.07 -0.25 7.39 71.98 0.53 0.28 16 19 F -0.24 -1.21 17.36 44.97 0.78 -0.43 16 20 C -0.15 0.12 7.43 31.12 0.23 0.35 16 21 H 0.09 0.14 8.14 -2.39 -0.02 0.12 16 22 H 0.09 0.63 6.21 -2.39 -0.01 0.62 16 23 H 0.10 -0.16 8.14 -2.39 -0.02 -0.18 16 24 H 0.17 0.44 6.19 -2.91 -0.02 0.42 16 25 H 0.09 -0.49 7.96 -2.39 -0.02 -0.51 16 26 H 0.40 -4.76 8.74 -74.06 -0.65 -5.40 16 27 H -0.29 -0.64 7.11 99.48 0.71 0.07 16 28 H -0.30 -1.40 7.11 99.48 0.71 -0.69 16 29 H 0.17 -0.37 7.49 -2.91 -0.02 -0.39 16 30 H 0.42 -2.29 7.68 -92.71 -0.71 -3.01 16 31 H 0.09 -0.69 8.14 -2.38 -0.02 -0.71 16 32 H 0.12 -1.28 8.08 -2.38 -0.02 -1.30 16 33 H 0.10 -0.73 8.14 -2.39 -0.02 -0.74 16 34 H 0.09 -0.64 7.85 -2.39 -0.02 -0.66 16 35 H 0.10 -0.24 7.90 -2.38 -0.02 -0.26 16 36 H 0.06 0.18 8.14 -2.38 -0.02 0.16 16 Total: 0.00 -22.16 306.79 1.25 -20.90 By element: Atomic # 1 Polarization: -12.11 SS G_CDS: -0.21 Total: -12.32 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 4.62 Total: 8.82 kcal Atomic # 7 Polarization: -3.04 SS G_CDS: -4.06 Total: -7.10 kcal Atomic # 8 Polarization: -7.61 SS G_CDS: -1.98 Total: -9.59 kcal Atomic # 9 Polarization: -1.21 SS G_CDS: 0.78 Total: -0.43 kcal Atomic # 14 Polarization: -2.38 SS G_CDS: 2.10 Total: -0.29 kcal Total: -22.16 1.25 -20.90 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_10803934.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.368 kcal (2) G-P(sol) polarization free energy of solvation -22.156 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.524 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.902 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.270 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds