Wall clock time and date at job start Tue Mar 9 2021 13:08:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.36453 * 120.29305 * 239.99655 * 4 2 1 6 6 C 1.40089 * 119.25315 * 180.02562 * 5 4 2 7 7 C 1.40856 * 132.86417 * 179.97438 * 6 5 4 8 8 C 1.46564 * 126.58141 * 0.02562 * 7 6 5 9 9 O 1.21716 * 119.99981 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99989 * 180.02562 * 8 7 6 11 11 C 1.46503 * 119.99966 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.84808 * 23.80328 * 11 10 8 13 13 C 1.53778 * 113.61331 * 154.99967 * 11 10 8 14 14 C 1.53789 * 87.07857 * 139.98233 * 13 11 10 15 15 H 1.08997 * 113.61460 * 89.11485 * 14 13 11 16 16 C 1.53003 * 113.61173 * 219.93251 * 14 13 11 17 17 F 1.39901 * 109.47088 * 300.00268 * 16 14 13 18 18 C 1.53776 * 87.08046 * 334.56437 * 14 13 11 19 19 C 1.40559 * 106.83818 * 180.02562 * 7 6 5 20 20 N 1.30735 * 108.74295 * 0.02562 * 19 7 6 21 21 N 1.36569 * 120.23268 * 359.97438 * 6 5 4 22 22 C 1.36241 * 120.08069 * 359.97438 * 21 6 5 23 23 C 1.35193 * 120.70560 * 359.72057 * 22 21 6 24 24 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 25 25 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 26 26 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 27 27 H 1.48492 * 109.99800 * 181.32238 * 3 2 1 28 28 H 1.07996 * 120.37309 * 0.02562 * 5 4 2 29 29 H 0.96997 * 120.00161 * 359.97438 * 10 8 7 30 30 H 1.09004 * 113.61377 * 254.52588 * 13 11 10 31 31 H 1.08993 * 113.61617 * 25.43632 * 13 11 10 32 32 H 1.09004 * 109.46871 * 59.99780 * 16 14 13 33 33 H 1.08997 * 109.46991 * 179.97438 * 16 14 13 34 34 H 1.08997 * 113.61889 * 270.88573 * 18 14 13 35 35 H 1.09005 * 113.61240 * 139.97915 * 18 14 13 36 36 H 1.08004 * 125.62316 * 179.97438 * 19 7 6 37 37 H 1.07998 * 119.64806 * 180.02562 * 22 21 6 38 38 H 1.08000 * 119.84054 * 180.27647 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7163 -1.8202 -1.1122 6 6 3.1716 -2.4632 -2.2706 7 6 3.9762 -3.5999 -2.4822 8 6 4.5766 -4.4495 -1.4499 9 8 4.3971 -4.1962 -0.2730 10 7 5.3285 -5.5106 -1.8038 11 6 5.9292 -6.3595 -0.7719 12 1 5.3975 -6.3110 0.1784 13 6 6.2161 -7.7944 -1.2448 14 6 7.5323 -7.7077 -0.4542 15 1 7.4402 -8.0279 0.5837 16 6 8.7213 -8.3509 -1.1710 17 9 8.4551 -9.7065 -1.3915 18 6 7.4510 -6.1832 -0.6381 19 6 4.0926 -3.7629 -3.8734 20 7 3.4201 -2.8111 -4.4657 21 7 2.8316 -1.9824 -3.5028 22 6 2.0465 -0.8741 -3.6105 23 6 1.5906 -0.2411 -2.5064 24 1 -0.3934 0.4416 -0.7651 25 1 1.7924 -0.5138 0.8900 26 1 1.5613 2.4680 1.2084 27 1 3.5344 1.7705 -0.0322 28 1 2.9834 -2.1987 -0.1367 29 1 5.4719 -5.7122 -2.7417 30 1 5.5175 -8.5321 -0.8501 31 1 6.3586 -7.8787 -2.3221 32 1 8.8824 -7.8521 -2.1267 33 1 9.6145 -8.2512 -0.5543 34 1 7.9311 -5.8271 -1.5496 35 1 7.7492 -5.6201 0.2463 36 1 4.6470 -4.5450 -4.3709 37 1 1.7815 -0.5002 -4.5884 38 1 0.9655 0.6337 -2.6081 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_11618758.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:42 Heat of formation + Delta-G solvation = 11.506874 kcal Electronic energy + Delta-G solvation = -24250.272266 eV Core-core repulsion = 20397.358351 eV Total energy + Delta-G solvation = -3852.913915 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.117 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -48.50642 -43.32499 -40.93599 -39.52750 -38.97365 -37.28839 -34.58973 -34.18187 -32.12646 -30.61090 -29.27521 -27.30386 -26.79104 -25.23222 -24.30461 -23.22790 -22.67550 -21.37728 -20.69406 -19.05310 -18.58547 -18.03087 -17.60772 -17.39688 -16.98723 -16.94549 -16.71775 -16.58803 -15.99214 -15.83605 -15.65091 -15.44636 -15.36234 -14.72485 -14.56309 -14.25584 -14.05029 -13.60995 -13.59939 -13.34497 -13.20088 -13.03761 -12.63734 -12.44581 -12.18981 -11.98889 -11.83786 -11.61178 -11.53469 -11.36819 -10.84118 -10.75661 -10.35670 -10.00273 -8.79952 -5.20482 -0.59119 -0.17891 0.97263 1.03957 1.10263 1.55441 1.85309 2.03182 2.25071 2.55866 3.02765 3.14411 3.28458 3.30652 3.35084 3.42147 3.56173 3.62003 3.74166 3.81721 3.92857 3.96262 4.05583 4.08743 4.16739 4.21108 4.33171 4.47109 4.56325 4.61607 4.68851 4.71444 4.79151 4.91897 4.97114 5.04279 5.11840 5.19312 5.25130 5.57884 5.61179 6.28004 6.35616 6.59591 7.37349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.699 3.301 4 C -0.068 4.068 5 C -0.097 4.097 6 C 0.170 3.830 7 C -0.318 4.318 8 C 0.602 3.398 9 O -0.550 6.550 10 N -0.719 5.719 11 C 0.128 3.872 12 H 0.119 0.881 13 C -0.138 4.138 14 C -0.145 4.145 15 H 0.105 0.895 16 C 0.073 3.927 17 F -0.216 7.216 18 C -0.143 4.143 19 C 0.121 3.879 20 N -0.312 5.312 21 N -0.267 5.267 22 C 0.122 3.878 23 C -0.157 4.157 24 H 0.378 0.622 25 H 0.123 0.877 26 H -0.246 1.246 27 H -0.255 1.255 28 H 0.161 0.839 29 H 0.399 0.601 30 H 0.080 0.920 31 H 0.089 0.911 32 H 0.075 0.925 33 H 0.076 0.924 34 H 0.089 0.911 35 H 0.078 0.922 36 H 0.199 0.801 37 H 0.180 0.820 38 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.364 3.808 -3.819 5.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.178 4.178 3 Si 0.598 3.402 4 C -0.073 4.073 5 C -0.116 4.116 6 C 0.049 3.951 7 C -0.333 4.333 8 C 0.392 3.608 9 O -0.429 6.429 10 N -0.369 5.369 11 C 0.023 3.977 12 H 0.136 0.864 13 C -0.176 4.176 14 C -0.164 4.164 15 H 0.123 0.877 16 C 0.018 3.982 17 F -0.197 7.197 18 C -0.182 4.182 19 C -0.061 4.061 20 N -0.133 5.133 21 N -0.031 5.031 22 C -0.004 4.004 23 C -0.178 4.178 24 H 0.226 0.774 25 H 0.140 0.860 26 H -0.170 1.170 27 H -0.179 1.179 28 H 0.178 0.822 29 H 0.233 0.767 30 H 0.099 0.901 31 H 0.108 0.892 32 H 0.093 0.907 33 H 0.094 0.906 34 H 0.107 0.893 35 H 0.097 0.903 36 H 0.215 0.785 37 H 0.197 0.803 38 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -0.225 4.650 -3.238 5.671 hybrid contribution 0.491 -1.229 0.301 1.357 sum 0.266 3.421 -2.937 4.517 Atomic orbital electron populations 1.86611 1.16299 1.81662 1.49088 1.25169 0.85599 1.10345 0.96713 0.95002 0.81463 0.75950 0.87772 1.20512 0.95931 0.94963 0.95943 1.20707 0.98337 0.94467 0.98112 1.19266 0.95548 0.94094 0.86200 1.19633 1.16251 1.03773 0.93602 1.16876 0.77119 0.79552 0.87300 1.90780 1.61707 1.71768 1.18617 1.45676 1.52585 1.28909 1.09760 1.22461 0.92774 0.89236 0.93244 0.86361 1.23349 0.96879 0.96468 1.00921 1.23003 0.95333 0.96865 1.01248 0.87675 1.21939 0.98101 0.77015 1.01163 1.92783 1.95538 1.35105 1.96311 1.23469 0.96848 0.94632 1.03267 1.24063 0.94337 0.95727 0.91935 1.77635 1.18479 1.06437 1.10710 1.46097 1.32138 1.19084 1.05765 1.21606 0.91727 0.85135 1.01945 1.20721 1.04094 1.02769 0.90220 0.77401 0.85985 1.17049 1.17881 0.82151 0.76664 0.90119 0.89234 0.90722 0.90551 0.89279 0.90320 0.78488 0.80323 0.81559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.64 12.87 -35.23 -0.45 0.19 16 2 C -0.07 0.10 2.84 36.00 0.10 0.20 16 3 Si 0.70 -1.68 31.98 -169.99 -5.44 -7.11 16 4 C -0.07 0.06 4.53 -104.55 -0.47 -0.42 16 5 C -0.10 -0.19 9.35 -39.53 -0.37 -0.56 16 6 C 0.17 0.49 6.76 -84.07 -0.57 -0.08 16 7 C -0.32 -0.81 6.17 -104.68 -0.65 -1.46 16 8 C 0.60 1.91 7.78 -12.90 -0.10 1.81 16 9 O -0.55 -3.58 15.30 5.17 0.08 -3.50 16 10 N -0.72 0.12 5.35 -54.36 -0.29 -0.17 16 11 C 0.13 -0.04 4.24 -67.12 -0.28 -0.32 16 12 H 0.12 0.18 7.46 -51.93 -0.39 -0.21 16 13 C -0.14 0.21 7.26 -25.92 -0.19 0.02 16 14 C -0.15 0.24 4.13 -89.80 -0.37 -0.13 16 15 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 16 C 0.07 -0.11 7.40 37.16 0.28 0.17 16 17 F -0.22 -0.43 17.22 2.25 0.04 -0.40 16 18 C -0.14 0.21 7.43 -25.92 -0.19 0.02 16 19 C 0.12 0.07 11.44 -17.14 -0.20 -0.12 16 20 N -0.31 -0.74 12.57 30.75 0.39 -0.35 16 21 N -0.27 -0.46 3.86 -10.55 -0.04 -0.50 16 22 C 0.12 -0.23 11.17 -16.68 -0.19 -0.41 16 23 C -0.16 0.54 8.38 -39.95 -0.33 0.21 16 24 H 0.38 -2.26 8.06 45.56 0.37 -1.89 16 25 H 0.12 -0.08 7.71 -51.93 -0.40 -0.48 16 26 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 27 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 28 H 0.16 0.44 7.01 -52.49 -0.37 0.07 16 29 H 0.40 -1.19 7.65 -40.82 -0.31 -1.50 16 30 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.09 -0.21 8.08 -51.93 -0.42 -0.63 16 32 H 0.07 -0.21 7.95 -51.93 -0.41 -0.62 16 33 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.09 -0.20 7.97 -51.93 -0.41 -0.62 16 35 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.20 -0.73 7.46 -52.48 -0.39 -1.12 16 37 H 0.18 -0.88 8.06 -52.49 -0.42 -1.30 16 38 H 0.17 -1.34 7.31 -52.49 -0.38 -1.73 16 LS Contribution 329.53 15.07 4.97 4.97 Total: 0.00 -11.09 329.53 -8.72 -19.80 By element: Atomic # 1 Polarization: -7.43 SS G_CDS: -4.43 Total: -11.86 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -3.53 Total: -1.07 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: 0.06 Total: -1.02 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -0.37 Total: -3.31 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.44 Total: -7.11 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -11.09 -8.72 -19.80 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_11618758.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.311 kcal (2) G-P(sol) polarization free energy of solvation -11.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.223 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.716 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.804 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds