Wall clock time and date at job start Tue Mar 9 2021 13:08:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.35446 * 125.56581 * 2 1 4 4 C 1.50707 * 126.06336 * 0.02910 * 3 2 1 5 5 O 1.42903 * 109.46442 * 210.02173 * 4 3 2 6 6 Si 1.86293 * 109.47256 * 330.01739 * 4 3 2 7 7 C 1.39830 * 107.86716 * 180.28772 * 3 2 1 8 8 C 1.50701 * 126.45835 * 179.74236 * 7 3 2 9 9 C 1.37872 * 107.08525 * 359.57655 * 7 3 2 10 10 C 1.46676 * 126.23471 * 180.11975 * 9 7 3 11 11 O 1.21692 * 120.00269 * 0.33002 * 10 9 7 12 12 N 1.34777 * 119.99946 * 180.33511 * 10 9 7 13 13 C 1.46498 * 120.00097 * 180.02562 * 12 10 9 14 14 H 1.09002 * 112.85002 * 336.19186 * 13 12 10 15 15 C 1.53780 * 113.61530 * 107.50045 * 13 12 10 16 16 C 1.53782 * 87.07885 * 139.98326 * 15 13 12 17 17 H 1.09003 * 113.69071 * 89.13424 * 16 15 13 18 18 C 1.52999 * 113.60893 * 220.01537 * 16 15 13 19 19 F 1.39904 * 109.46938 * 162.49816 * 18 16 15 20 20 C 1.53774 * 87.08150 * 334.56717 * 16 15 13 21 21 N 1.35533 * 125.56010 * 180.02562 * 2 1 3 22 22 H 1.08994 * 109.47152 * 89.99531 * 1 2 3 23 23 H 1.09001 * 109.46651 * 209.99631 * 1 2 3 24 24 H 1.08996 * 109.46932 * 329.99420 * 1 2 3 25 25 H 1.08999 * 109.47345 * 90.02243 * 4 3 2 26 26 H 0.96700 * 114.00311 * 60.00230 * 5 4 3 27 27 H 1.48506 * 109.99973 * 180.02562 * 6 4 3 28 28 H 1.48493 * 110.00375 * 301.32185 * 6 4 3 29 29 H 1.08996 * 109.47193 * 90.00162 * 8 7 3 30 30 H 1.09004 * 109.46859 * 210.00027 * 8 7 3 31 31 H 1.08999 * 109.47339 * 329.99805 * 8 7 3 32 32 H 0.96997 * 119.99899 * 359.97438 * 12 10 9 33 33 H 1.09002 * 113.61024 * 254.52917 * 15 13 12 34 34 H 1.08997 * 113.61487 * 25.43461 * 15 13 12 35 35 H 1.08994 * 109.47801 * 282.49664 * 18 16 15 36 36 H 1.08995 * 109.47456 * 42.50386 * 18 16 15 37 37 H 1.09001 * 113.61421 * 270.88735 * 20 16 15 38 38 H 1.08996 * 113.61394 * 139.98555 * 20 16 15 39 39 H 0.96999 * 125.67988 * 359.97438 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8199 2.5321 0.0006 5 8 2.7767 3.3518 -0.6737 6 14 0.1800 2.6422 -0.8764 7 6 3.6270 0.6767 -0.0067 8 6 4.8486 1.5592 -0.0145 9 6 3.6123 -0.7019 -0.0009 10 6 4.7860 -1.5815 -0.0022 11 8 5.9049 -1.1031 -0.0029 12 7 4.6253 -2.9197 -0.0028 13 6 5.7976 -3.7982 -0.0036 14 1 6.6874 -3.3165 -0.4091 15 6 6.0369 -4.5074 1.3398 16 6 6.4070 -5.7575 0.5242 17 1 7.4640 -5.8133 0.2637 18 6 5.8733 -7.0602 1.1234 19 9 5.8996 -8.0658 0.1511 20 6 5.5246 -5.1893 -0.5997 21 7 2.2953 -1.1026 -0.0005 22 1 -0.3633 0.0001 -1.0276 23 1 -0.3633 -0.8901 0.5138 24 1 -0.3633 0.8899 0.5139 25 1 1.7062 2.8767 1.0284 26 1 2.9286 3.1020 -1.5954 27 1 -0.2989 4.0479 -0.8832 28 1 0.3145 2.1453 -2.2692 29 1 5.1487 1.7733 1.0112 30 1 5.6614 1.0497 -0.5322 31 1 4.6192 2.4926 -0.5284 32 1 3.7335 -3.3010 -0.0020 33 1 6.8700 -4.0949 1.9089 34 1 5.1331 -4.6275 1.9371 35 1 6.4971 -7.3545 1.9673 36 1 4.8486 -6.9106 1.4636 37 1 4.4808 -5.4958 -0.5325 38 1 5.9441 -5.3273 -1.5962 39 1 1.9833 -2.0210 -0.0006 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12297754.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:45 Heat of formation + Delta-G solvation = -56.770294 kcal Electronic energy + Delta-G solvation = -22441.068522 eV Core-core repulsion = 18879.760601 eV Total energy + Delta-G solvation = -3561.307921 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -48.57872 -42.69159 -40.94521 -39.17245 -37.84947 -34.90260 -33.66407 -33.03270 -29.74078 -29.33632 -27.37514 -26.90824 -26.33172 -23.87950 -22.17642 -21.24684 -20.71444 -20.24329 -19.26458 -17.83611 -17.44444 -17.06157 -16.85119 -16.68245 -16.65226 -16.02878 -15.90204 -15.69534 -15.32898 -15.05590 -14.59876 -14.29444 -14.09598 -14.02939 -13.72396 -13.69936 -13.41367 -13.24525 -13.18158 -13.14636 -12.73972 -12.46317 -12.26450 -11.97033 -11.77344 -11.68288 -11.47565 -10.99692 -10.44977 -10.19661 -9.50789 -8.99761 -4.81996 0.39350 1.20805 1.66070 1.67466 1.91206 2.01542 2.09651 2.35779 3.18023 3.23319 3.41482 3.44800 3.60474 3.61845 3.76581 3.88345 3.96155 3.97668 4.00677 4.09216 4.29507 4.40040 4.43678 4.50426 4.60308 4.62309 4.67802 4.70627 4.73908 4.80069 4.86819 4.93198 5.07120 5.15119 5.34770 5.40900 5.48876 5.72159 5.93955 6.25641 6.42396 6.55423 7.14596 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.066 3.934 3 C -0.211 4.211 4 C -0.034 4.034 5 O -0.527 6.527 6 Si 0.653 3.347 7 C -0.040 4.040 8 C -0.100 4.100 9 C -0.069 4.069 10 C 0.592 3.408 11 O -0.521 6.521 12 N -0.724 5.724 13 C 0.126 3.874 14 H 0.121 0.879 15 C -0.143 4.143 16 C -0.144 4.144 17 H 0.107 0.893 18 C 0.073 3.927 19 F -0.216 7.216 20 C -0.139 4.139 21 N -0.535 5.535 22 H 0.088 0.912 23 H 0.087 0.913 24 H 0.102 0.898 25 H 0.112 0.888 26 H 0.374 0.626 27 H -0.255 1.255 28 H -0.261 1.261 29 H 0.066 0.934 30 H 0.075 0.925 31 H 0.081 0.919 32 H 0.394 0.606 33 H 0.080 0.920 34 H 0.088 0.912 35 H 0.077 0.923 36 H 0.074 0.926 37 H 0.088 0.912 38 H 0.081 0.919 39 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.768 -3.811 1.749 7.131 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.052 4.052 3 C -0.218 4.218 4 C -0.144 4.144 5 O -0.334 6.334 6 Si 0.554 3.446 7 C -0.048 4.048 8 C -0.157 4.157 9 C -0.180 4.180 10 C 0.381 3.619 11 O -0.397 6.397 12 N -0.375 5.375 13 C 0.021 3.979 14 H 0.139 0.861 15 C -0.182 4.182 16 C -0.163 4.163 17 H 0.125 0.875 18 C 0.018 3.982 19 F -0.197 7.197 20 C -0.177 4.177 21 N -0.132 5.132 22 H 0.106 0.894 23 H 0.106 0.894 24 H 0.120 0.880 25 H 0.130 0.870 26 H 0.222 0.778 27 H -0.180 1.180 28 H -0.185 1.185 29 H 0.085 0.915 30 H 0.094 0.906 31 H 0.100 0.900 32 H 0.227 0.773 33 H 0.099 0.901 34 H 0.106 0.894 35 H 0.096 0.904 36 H 0.092 0.908 37 H 0.106 0.894 38 H 0.100 0.900 39 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -5.359 -3.021 1.620 6.361 hybrid contribution 0.399 -0.726 -0.679 1.071 sum -4.960 -3.747 0.941 6.287 Atomic orbital electron populations 1.20420 0.87591 1.03699 1.04174 1.20156 0.93413 0.85756 1.05864 1.19555 0.92946 0.94861 1.14397 1.24252 1.01126 0.86792 1.02264 1.86553 1.61003 1.57058 1.28746 0.95574 0.82194 0.83690 0.83139 1.19807 0.94876 0.90677 0.99452 1.20566 0.93826 0.98589 1.02741 1.20113 0.82737 0.94138 1.21007 1.17056 0.87584 0.81306 0.75973 1.90842 1.24186 1.74910 1.49758 1.45864 1.09382 1.05773 1.76470 1.22518 0.89991 0.88611 0.96732 0.86120 1.23453 1.02726 0.94777 0.97215 1.23000 1.01454 0.93892 0.98002 0.87500 1.21940 1.02455 0.84599 0.89193 1.92787 1.98074 1.62811 1.66045 1.23364 1.00656 0.94317 0.99358 1.41736 1.05321 1.08202 1.57954 0.89378 0.89425 0.88006 0.86998 0.77780 1.17982 1.18536 0.91531 0.90632 0.90003 0.77270 0.90091 0.89357 0.90429 0.90798 0.89393 0.90014 0.74717 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.53 8.21 36.01 0.30 0.83 16 2 C 0.07 -0.10 6.84 -81.95 -0.56 -0.66 16 3 C -0.21 -0.19 5.38 -105.02 -0.57 -0.75 16 4 C -0.03 -0.01 3.03 36.01 0.11 0.10 16 5 O -0.53 -0.99 10.19 -35.23 -0.36 -1.35 16 6 Si 0.65 -0.63 26.76 -169.99 -4.55 -5.18 16 7 C -0.04 -0.11 6.15 -104.16 -0.64 -0.75 16 8 C -0.10 -0.34 9.50 36.01 0.34 0.00 16 9 C -0.07 -0.11 7.06 -81.98 -0.58 -0.69 16 10 C 0.59 1.42 7.79 -12.85 -0.10 1.32 16 11 O -0.52 -3.13 14.41 5.20 0.07 -3.06 16 12 N -0.72 0.81 5.35 -54.33 -0.29 0.52 16 13 C 0.13 -0.14 4.24 -67.12 -0.28 -0.42 16 14 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 15 C -0.14 0.31 7.43 -25.92 -0.19 0.12 16 16 C -0.14 0.33 4.11 -89.81 -0.37 -0.04 16 17 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 18 C 0.07 -0.15 7.33 37.16 0.27 0.12 16 19 F -0.22 -0.32 17.30 2.25 0.04 -0.28 16 20 C -0.14 0.32 7.34 -25.92 -0.19 0.13 16 21 N -0.53 1.01 5.99 -5.69 -0.03 0.97 16 22 H 0.09 -0.50 7.13 -51.93 -0.37 -0.87 16 23 H 0.09 -0.61 8.14 -51.93 -0.42 -1.03 16 24 H 0.10 -0.64 5.17 -51.93 -0.27 -0.91 16 25 H 0.11 -0.01 7.96 -51.93 -0.41 -0.43 16 26 H 0.37 -0.15 8.47 45.56 0.39 0.23 16 27 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 28 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 29 H 0.07 0.25 8.14 -51.93 -0.42 -0.17 16 30 H 0.07 0.35 6.50 -51.93 -0.34 0.01 16 31 H 0.08 0.22 5.46 -51.93 -0.28 -0.07 16 32 H 0.39 -1.59 7.86 -40.82 -0.32 -1.91 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 34 H 0.09 -0.27 8.03 -51.93 -0.42 -0.68 16 35 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 36 H 0.07 -0.26 8.05 -51.93 -0.42 -0.68 16 37 H 0.09 -0.29 8.08 -51.93 -0.42 -0.71 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.42 -2.20 8.19 -40.82 -0.33 -2.53 16 LS Contribution 315.85 15.07 4.76 4.76 Total: 0.00 -8.87 315.85 -8.14 -17.01 By element: Atomic # 1 Polarization: -7.38 SS G_CDS: -5.32 Total: -12.69 kcal Atomic # 6 Polarization: 1.76 SS G_CDS: -2.46 Total: -0.70 kcal Atomic # 7 Polarization: 1.82 SS G_CDS: -0.32 Total: 1.49 kcal Atomic # 8 Polarization: -4.12 SS G_CDS: -0.28 Total: -4.41 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -4.55 Total: -5.18 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -8.87 -8.14 -17.01 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12297754.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.764 kcal (2) G-P(sol) polarization free energy of solvation -8.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.631 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.140 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.007 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds