Wall clock time and date at job start Tue Mar 9 2021 13:08:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35653 * 117.00282 * 2 1 4 4 C 1.38407 * 120.11767 * 0.23334 * 3 2 1 5 5 C 1.38724 * 120.03153 * 180.25595 * 4 3 2 6 6 O 1.35718 * 119.86477 * 179.76340 * 5 4 3 7 7 C 1.42898 * 116.99825 * 359.97438 * 6 5 4 8 8 C 1.39149 * 120.27331 * 359.74113 * 5 4 3 9 9 C 1.50703 * 119.88130 * 180.02562 * 8 5 4 10 10 O 1.42896 * 109.47088 * 285.02203 * 9 8 5 11 11 Si 1.86299 * 109.47244 * 165.01971 * 9 8 5 12 12 C 1.37582 * 120.24020 * 0.02562 * 8 5 4 13 13 C 1.39821 * 119.96372 * 359.97438 * 12 8 5 14 14 C 1.47306 * 120.13354 * 179.97438 * 13 12 8 15 15 O 1.21616 * 119.99473 * 179.97438 * 14 13 12 16 16 N 1.34769 * 120.00208 * 359.97438 * 14 13 12 17 17 C 1.46497 * 120.00274 * 180.02562 * 16 14 13 18 18 H 1.09002 * 112.90477 * 336.24972 * 17 16 14 19 19 C 1.53779 * 113.61581 * 107.50145 * 17 16 14 20 20 C 1.53779 * 87.08402 * 139.98450 * 19 17 16 21 21 H 1.09000 * 113.61527 * 89.11480 * 20 19 17 22 22 C 1.53000 * 113.61731 * 220.02348 * 20 19 17 23 23 F 1.39901 * 109.46800 * 277.49417 * 22 20 19 24 24 C 1.53784 * 113.61569 * 204.99925 * 17 16 14 25 25 H 1.08999 * 109.47087 * 60.00145 * 1 2 3 26 26 H 1.08997 * 109.47079 * 180.02562 * 1 2 3 27 27 H 1.08995 * 109.46792 * 300.00126 * 1 2 3 28 28 H 1.07994 * 119.98530 * 359.97438 * 4 3 2 29 29 H 1.08998 * 109.46941 * 180.02562 * 7 6 5 30 30 H 1.09002 * 109.46728 * 299.99818 * 7 6 5 31 31 H 1.08999 * 109.46765 * 60.00286 * 7 6 5 32 32 H 1.08997 * 109.47139 * 45.01941 * 9 8 5 33 33 H 0.96708 * 114.00511 * 59.99816 * 10 9 8 34 34 H 1.48502 * 109.99821 * 178.67980 * 11 9 8 35 35 H 1.48489 * 109.99978 * 300.00383 * 11 9 8 36 36 H 1.07999 * 120.01899 * 179.97438 * 12 8 5 37 37 H 0.97009 * 120.00192 * 0.02562 * 16 14 13 38 38 H 1.09006 * 113.61307 * 25.43652 * 19 17 16 39 39 H 1.08999 * 113.69146 * 254.54138 * 19 17 16 40 40 H 1.09005 * 109.47442 * 37.48787 * 22 20 19 41 41 H 1.08994 * 109.47401 * 157.49461 * 22 20 19 42 42 H 1.09004 * 113.61451 * 105.47149 * 24 17 16 43 43 H 1.08994 * 113.61477 * 334.56451 * 24 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 1.2936 2.3710 0.0049 5 6 1.9252 3.6061 -0.0005 6 8 1.1851 4.7437 -0.0006 7 6 -0.2359 4.5931 0.0045 8 6 3.3146 3.6834 -0.0054 9 6 3.9916 5.0298 -0.0106 10 8 3.8892 5.6093 -1.3127 11 14 5.7880 4.8233 0.4378 12 6 4.0724 2.5351 -0.0054 13 6 3.4462 1.2850 0.0000 14 6 4.2539 0.0532 -0.0006 15 8 3.7066 -1.0328 0.0045 16 7 5.5994 0.1297 -0.0069 17 6 6.4028 -1.0954 -0.0081 18 1 5.8688 -1.9533 0.4005 19 6 7.0888 -1.3809 -1.3544 20 6 8.3174 -1.8273 -0.5444 21 1 8.3068 -2.8853 -0.2824 22 6 9.6480 -1.3772 -1.1508 23 9 10.0259 -2.2692 -2.1601 24 6 7.8112 -0.9090 0.5806 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8899 28 1 0.2150 2.3165 0.0083 29 1 -0.7055 5.5768 0.0034 30 1 -0.5460 4.0419 -0.8833 31 1 -0.5400 4.0459 0.8968 32 1 3.5083 5.6823 0.7165 33 1 2.9799 5.7461 -1.6121 34 1 6.4742 6.1399 0.4051 35 1 5.9080 4.2214 1.7899 36 1 5.1505 2.5993 -0.0096 37 1 6.0361 0.9960 -0.0107 38 1 7.2624 -0.4874 -1.9542 39 1 6.6230 -2.1871 -1.9210 40 1 9.5359 -0.3781 -1.5721 41 1 10.4137 -1.3606 -0.3752 42 1 7.9277 -1.3347 1.5773 43 1 8.1823 0.1134 0.5098 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12297780.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:47 Heat of formation + Delta-G solvation = -136.569512 kcal Electronic energy + Delta-G solvation = -28358.144680 eV Core-core repulsion = 24093.211792 eV Total energy + Delta-G solvation = -4264.932889 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -48.44576 -42.13081 -40.93189 -40.13707 -39.08643 -38.36175 -36.95363 -34.58061 -32.23776 -31.81301 -29.38122 -29.16328 -28.24022 -26.78280 -26.10554 -25.00515 -23.57563 -22.51276 -21.45705 -20.79503 -20.03714 -18.63024 -18.56810 -17.84645 -17.50330 -17.25571 -17.08931 -16.81865 -16.74301 -16.65453 -16.35320 -15.91997 -15.81237 -15.65020 -15.50224 -15.43486 -14.86008 -14.29850 -14.25143 -14.04677 -13.70208 -13.55796 -13.51143 -13.34863 -12.89297 -12.83049 -12.69967 -12.58575 -12.48398 -12.15288 -12.00675 -11.70508 -11.54756 -11.35154 -11.26299 -11.18936 -10.64674 -10.00087 -9.92212 -9.17301 -5.00740 -0.26014 0.08824 1.34101 1.56296 1.82722 1.90982 1.96533 2.10925 2.18661 2.67132 3.31532 3.36881 3.40911 3.47656 3.56434 3.67297 3.69398 3.78628 3.87975 3.92013 3.96126 4.03672 4.07019 4.08771 4.09993 4.14388 4.17521 4.21056 4.32433 4.36701 4.49599 4.57303 4.59894 4.69176 4.74412 4.80977 4.91666 4.95279 4.99401 5.04943 5.23748 5.27779 5.59449 5.88604 6.23320 6.56418 6.57800 7.37522 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.232 3.768 4 C -0.309 4.309 5 C 0.207 3.793 6 O -0.309 6.309 7 C 0.023 3.977 8 C -0.190 4.190 9 C -0.066 4.066 10 O -0.536 6.536 11 Si 0.734 3.266 12 C 0.001 3.999 13 C -0.206 4.206 14 C 0.567 3.433 15 O -0.517 6.517 16 N -0.723 5.723 17 C 0.127 3.873 18 H 0.119 0.881 19 C -0.147 4.147 20 C -0.145 4.145 21 H 0.106 0.894 22 C 0.073 3.927 23 F -0.217 7.217 24 C -0.139 4.139 25 H 0.058 0.942 26 H 0.108 0.892 27 H 0.057 0.943 28 H 0.145 0.855 29 H 0.108 0.892 30 H 0.061 0.939 31 H 0.060 0.940 32 H 0.075 0.925 33 H 0.366 0.634 34 H -0.252 1.252 35 H -0.246 1.246 36 H 0.141 0.859 37 H 0.398 0.602 38 H 0.090 0.910 39 H 0.077 0.923 40 H 0.076 0.924 41 H 0.076 0.924 42 H 0.081 0.919 43 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.938 2.836 1.177 3.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.182 3.818 4 C -0.329 4.329 5 C 0.159 3.841 6 O -0.221 6.221 7 C -0.072 4.072 8 C -0.191 4.191 9 C -0.174 4.174 10 O -0.341 6.341 11 Si 0.632 3.368 12 C -0.018 4.018 13 C -0.210 4.210 14 C 0.355 3.645 15 O -0.393 6.393 16 N -0.375 5.375 17 C 0.022 3.978 18 H 0.137 0.863 19 C -0.185 4.185 20 C -0.164 4.164 21 H 0.124 0.876 22 C 0.018 3.982 23 F -0.198 7.198 24 C -0.177 4.177 25 H 0.076 0.924 26 H 0.126 0.874 27 H 0.076 0.924 28 H 0.163 0.837 29 H 0.126 0.874 30 H 0.080 0.920 31 H 0.079 0.921 32 H 0.092 0.908 33 H 0.214 0.786 34 H -0.176 1.176 35 H -0.171 1.171 36 H 0.158 0.842 37 H 0.233 0.767 38 H 0.108 0.892 39 H 0.096 0.904 40 H 0.095 0.905 41 H 0.094 0.906 42 H 0.100 0.900 43 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.951 2.214 1.763 2.986 hybrid contribution -2.118 1.014 0.299 2.367 sum -3.069 3.228 2.063 4.909 Atomic orbital electron populations 1.23246 0.78209 1.04917 1.01291 1.86406 1.21185 1.24966 1.85779 1.18714 0.90653 0.84424 0.87966 1.21277 1.01112 0.91466 1.19001 1.18747 0.90357 0.84806 0.90142 1.86034 1.19937 1.28914 1.87233 1.23218 0.77348 1.04735 1.01880 1.19438 0.90453 0.96791 1.12466 1.25267 1.13221 0.90492 0.88429 1.86721 1.32138 1.83554 1.31687 0.93407 0.75456 0.85560 0.82350 1.20665 0.98595 0.89857 0.92655 1.19111 0.90714 0.93680 1.17490 1.17811 0.81906 0.88497 0.76275 1.90848 1.71387 1.28667 1.48399 1.45863 1.05865 1.09339 1.76414 1.22463 0.89839 0.88693 0.96798 0.86330 1.23560 0.95471 1.02344 0.97165 1.23009 0.94264 1.01392 0.97718 0.87600 1.21977 0.96158 0.91711 0.88350 1.92786 1.92712 1.71110 1.63216 1.23352 0.94923 1.00577 0.98852 0.92372 0.87404 0.92443 0.83737 0.87418 0.92021 0.92149 0.90770 0.78594 1.17626 1.17069 0.84238 0.76676 0.89198 0.90426 0.90541 0.90580 0.89981 0.88959 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.93 8.56 -40.58 -0.35 -1.27 16 3 C 0.23 0.58 6.70 -38.73 -0.26 0.32 16 4 C -0.31 -0.14 8.01 -39.34 -0.31 -0.45 16 5 C 0.21 0.14 6.62 -39.06 -0.26 -0.12 16 6 O -0.31 0.10 9.36 -18.86 -0.18 -0.08 16 7 C 0.02 -0.08 9.80 101.05 0.99 0.91 16 8 C -0.19 -0.12 5.28 -104.52 -0.55 -0.67 16 9 C -0.07 -0.03 2.32 36.01 0.08 0.06 16 10 O -0.54 -0.61 12.65 -35.23 -0.45 -1.06 16 11 Si 0.73 -0.70 30.16 -169.99 -5.13 -5.83 16 12 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 13 C -0.21 -0.44 5.89 -104.83 -0.62 -1.06 16 14 C 0.57 1.81 7.76 -12.58 -0.10 1.72 16 15 O -0.52 -3.64 14.75 -16.66 -0.25 -3.89 16 16 N -0.72 0.23 5.30 -54.13 -0.29 -0.06 16 17 C 0.13 -0.08 4.24 -67.12 -0.28 -0.36 16 18 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 19 C -0.15 0.13 7.43 -25.92 -0.19 -0.06 16 20 C -0.14 0.27 4.10 -89.81 -0.37 -0.09 16 21 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 22 C 0.07 -0.12 7.35 37.16 0.27 0.15 16 23 F -0.22 -0.49 17.36 2.25 0.04 -0.45 16 24 C -0.14 0.42 7.39 -25.91 -0.19 0.22 16 25 H 0.06 -0.14 7.67 -51.93 -0.40 -0.54 16 26 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 27 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 28 H 0.15 -0.27 4.50 -52.49 -0.24 -0.51 16 29 H 0.11 -0.52 8.14 -51.93 -0.42 -0.94 16 30 H 0.06 -0.26 7.65 -51.93 -0.40 -0.65 16 31 H 0.06 -0.24 7.65 -51.93 -0.40 -0.63 16 32 H 0.07 0.05 7.82 -51.93 -0.41 -0.36 16 33 H 0.37 -0.28 8.58 45.56 0.39 0.11 16 34 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 35 H -0.25 0.01 7.11 56.52 0.40 0.41 16 36 H 0.14 -0.43 3.43 -52.49 -0.18 -0.61 16 37 H 0.40 -1.32 6.75 -40.82 -0.28 -1.59 16 38 H 0.09 -0.15 7.96 -51.93 -0.41 -0.57 16 39 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 40 H 0.08 -0.25 7.94 -51.93 -0.41 -0.66 16 41 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 42 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 43 H 0.09 -0.43 8.08 -51.93 -0.42 -0.85 16 LS Contribution 355.17 15.07 5.35 5.35 Total: 0.00 -9.25 355.17 -8.02 -17.27 By element: Atomic # 1 Polarization: -5.55 SS G_CDS: -5.66 Total: -11.21 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -1.12 Total: 1.22 kcal Atomic # 7 Polarization: 0.23 SS G_CDS: -0.29 Total: -0.06 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: -1.22 Total: -6.29 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.13 Total: -5.83 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.25 -8.02 -17.27 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12297780.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.299 kcal (2) G-P(sol) polarization free energy of solvation -9.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.553 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.017 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.271 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.570 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds