Wall clock time and date at job start Tue Mar 9 2021 13:08:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47349 * 2 1 4 4 C 1.50703 * 109.47055 * 240.00160 * 2 1 3 5 5 C 1.38232 * 120.00033 * 119.72851 * 4 2 1 6 6 C 1.38234 * 120.00023 * 179.76773 * 5 4 2 7 7 C 1.38233 * 119.99717 * 0.48460 * 6 5 4 8 8 C 1.50703 * 119.99837 * 179.76774 * 7 6 5 9 9 C 1.50696 * 109.47143 * 270.02089 * 8 7 6 10 10 O 1.21279 * 120.00097 * 0.02562 * 9 8 7 11 11 N 1.34783 * 119.99633 * 179.97438 * 9 8 7 12 12 C 1.46503 * 119.99414 * 179.97438 * 11 9 8 13 13 H 1.08997 * 112.85295 * 25.34079 * 12 11 9 14 14 C 1.53784 * 113.60911 * 156.53305 * 12 11 9 15 15 C 1.53779 * 87.08162 * 139.98131 * 14 12 11 16 16 H 1.09008 * 113.61721 * 89.11182 * 15 14 12 17 17 C 1.52995 * 113.61701 * 219.93434 * 15 14 12 18 18 F 1.39900 * 109.47718 * 184.99860 * 17 15 14 19 19 C 1.53780 * 113.61485 * 254.13501 * 12 11 9 20 20 C 1.38237 * 120.00105 * 359.79024 * 7 6 5 21 21 C 1.38227 * 119.99741 * 359.95612 * 20 7 6 22 22 H 0.96703 * 114.00193 * 300.00032 * 1 2 3 23 23 H 1.09002 * 109.46984 * 120.00249 * 2 1 3 24 24 H 1.48501 * 109.99997 * 178.67824 * 3 2 1 25 25 H 1.48495 * 110.00011 * 300.00099 * 3 2 1 26 26 H 1.07998 * 120.00038 * 359.97438 * 5 4 2 27 27 H 1.07996 * 119.99833 * 180.24999 * 6 5 4 28 28 H 1.09006 * 109.47385 * 30.02249 * 8 7 6 29 29 H 1.09003 * 109.47048 * 150.01713 * 8 7 6 30 30 H 0.96991 * 120.00508 * 0.02562 * 11 9 8 31 31 H 1.09001 * 113.61314 * 254.52497 * 14 12 11 32 32 H 1.08999 * 113.62167 * 25.34880 * 14 12 11 33 33 H 1.09004 * 109.47226 * 304.99769 * 17 15 14 34 34 H 1.09003 * 109.47360 * 64.99383 * 17 15 14 35 35 H 1.09003 * 113.61373 * 334.57585 * 19 12 11 36 36 H 1.09002 * 113.61260 * 105.47141 * 19 12 11 37 37 H 1.08006 * 119.99584 * 179.97438 * 20 7 6 38 38 H 1.08004 * 119.99469 * 179.97438 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7214 -0.0370 -2.1432 6 6 3.1861 -0.6900 -3.2695 7 6 2.8525 -2.0135 -3.4881 8 6 3.3548 -2.7239 -4.7186 9 6 2.3622 -2.5505 -5.8391 10 8 1.3471 -1.9124 -5.6567 11 7 2.6031 -3.1036 -7.0444 12 6 1.6378 -2.9355 -8.1335 13 1 1.0287 -2.0382 -8.0245 14 6 2.2546 -3.0950 -9.5332 15 6 0.9755 -3.8539 -9.9242 16 1 0.1840 -3.2085 -10.3052 17 6 1.2327 -5.0691 -10.8175 18 9 0.0110 -5.6247 -11.2124 19 6 0.8199 -4.2028 -8.4328 20 6 2.0577 -2.6853 -2.5782 21 6 1.5973 -2.0338 -1.4493 22 1 -0.3934 0.4417 0.7651 23 1 1.7923 -0.5139 0.8900 24 1 3.5346 1.7702 0.0322 25 1 1.5616 2.4679 -1.2084 26 1 2.9783 0.9984 -1.9747 27 1 3.8067 -0.1649 -3.9805 28 1 4.3151 -2.3019 -5.0153 29 1 3.4759 -3.7852 -4.5014 30 1 3.4151 -3.6136 -7.1904 31 1 2.3821 -2.1517 -10.0643 32 1 3.1522 -3.7133 -9.5471 33 1 1.7930 -4.7595 -11.6998 34 1 1.8076 -5.8117 -10.2642 35 1 1.3237 -5.1257 -8.1454 36 1 -0.2091 -4.1525 -8.0767 37 1 1.7967 -3.7193 -2.7492 38 1 0.9760 -2.5586 -0.7387 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_12335836.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:51 Heat of formation + Delta-G solvation = -72.656266 kcal Electronic energy + Delta-G solvation = -21021.604412 eV Core-core repulsion = 17552.345012 eV Total energy + Delta-G solvation = -3469.259399 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -48.56599 -41.42253 -40.53123 -39.31334 -37.62910 -34.77139 -34.15053 -32.10509 -30.29482 -28.99024 -26.77630 -25.86918 -23.99898 -23.63776 -22.06441 -21.49552 -20.70022 -18.42278 -18.12850 -17.94594 -17.38233 -17.02940 -16.93563 -16.75734 -16.41920 -16.05897 -15.73586 -15.60333 -15.14829 -14.89920 -14.73957 -14.47276 -13.87647 -13.71472 -13.52233 -13.48552 -13.19953 -12.97924 -12.90827 -12.48960 -12.34576 -12.10277 -12.06126 -11.85919 -11.52986 -11.30193 -11.00323 -10.37280 -10.09095 -10.03792 -9.69203 -4.99183 0.09437 0.28753 1.26830 1.55784 1.59078 1.94542 2.11112 2.64906 3.33483 3.39136 3.39846 3.54514 3.60690 3.69350 3.73729 3.80551 3.92507 3.96416 4.11771 4.20590 4.23454 4.27472 4.31319 4.43497 4.52598 4.55798 4.58735 4.66937 4.75182 4.78782 4.89309 4.93715 4.98465 5.01246 5.21503 5.25335 5.39183 5.43966 5.53609 5.87185 6.52068 6.87908 7.23020 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.081 4.081 3 Si 0.778 3.222 4 C -0.097 4.097 5 C -0.147 4.147 6 C -0.112 4.112 7 C -0.071 4.071 8 C -0.096 4.096 9 C 0.511 3.489 10 O -0.585 6.585 11 N -0.706 5.706 12 C 0.115 3.885 13 H 0.086 0.914 14 C -0.117 4.117 15 C -0.143 4.143 16 H 0.094 0.906 17 C 0.067 3.933 18 F -0.242 7.242 19 C -0.147 4.147 20 C -0.112 4.112 21 C -0.103 4.103 22 H 0.403 0.597 23 H 0.096 0.904 24 H -0.284 1.284 25 H -0.305 1.305 26 H 0.113 0.887 27 H 0.137 0.863 28 H 0.134 0.866 29 H 0.136 0.864 30 H 0.420 0.580 31 H 0.084 0.916 32 H 0.118 0.882 33 H 0.095 0.905 34 H 0.095 0.905 35 H 0.102 0.898 36 H 0.053 0.947 37 H 0.142 0.858 38 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.477 -2.104 1.355 6.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.190 4.190 3 Si 0.685 3.315 4 C -0.097 4.097 5 C -0.164 4.164 6 C -0.130 4.130 7 C -0.072 4.072 8 C -0.136 4.136 9 C 0.299 3.701 10 O -0.464 6.464 11 N -0.358 5.358 12 C 0.010 3.990 13 H 0.104 0.896 14 C -0.155 4.155 15 C -0.162 4.162 16 H 0.112 0.888 17 C 0.012 3.988 18 F -0.223 7.223 19 C -0.186 4.186 20 C -0.129 4.129 21 C -0.121 4.121 22 H 0.254 0.746 23 H 0.114 0.886 24 H -0.212 1.212 25 H -0.234 1.234 26 H 0.131 0.869 27 H 0.155 0.845 28 H 0.152 0.848 29 H 0.154 0.846 30 H 0.259 0.741 31 H 0.103 0.897 32 H 0.136 0.864 33 H 0.113 0.887 34 H 0.113 0.887 35 H 0.121 0.879 36 H 0.072 0.928 37 H 0.160 0.840 38 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 6.306 -1.391 0.522 6.479 hybrid contribution -0.101 -0.475 -0.365 0.608 sum 6.205 -1.866 0.157 6.481 Atomic orbital electron populations 1.86457 1.17382 1.82381 1.51387 1.24867 0.85784 1.11069 0.97311 0.94555 0.77255 0.75286 0.84419 1.19737 0.98413 0.95149 0.96438 1.20987 1.00605 0.98861 0.95978 1.21152 1.00312 0.94650 0.96873 1.19606 0.97798 0.93990 0.95798 1.20773 0.98897 1.04604 0.89289 1.21087 0.86891 0.77759 0.84379 1.90757 1.30286 1.42320 1.83069 1.45864 1.24925 1.54818 1.10216 1.22401 0.91784 0.98376 0.86443 0.89575 1.23260 0.97395 1.01698 0.93158 1.22985 1.00266 0.97871 0.95114 0.88811 1.22245 0.81650 0.94832 1.00041 1.92738 1.49185 1.87540 1.92829 1.23609 1.00629 0.99080 0.95283 1.21358 0.96642 1.01044 0.93900 1.21173 0.98732 0.93962 0.98229 0.74574 0.88579 1.21159 1.23398 0.86940 0.84481 0.84849 0.84614 0.74138 0.89690 0.86365 0.88702 0.88723 0.87948 0.92829 0.84042 0.84703 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.03 12.74 -148.98 -1.90 -3.92 16 2 C -0.08 -0.23 2.81 71.24 0.20 -0.03 16 3 Si 0.78 0.80 29.79 68.60 2.04 2.84 16 4 C -0.10 -0.86 5.42 -19.87 -0.11 -0.97 16 5 C -0.15 -1.41 8.67 22.27 0.19 -1.22 16 6 C -0.11 -0.79 9.70 22.27 0.22 -0.57 16 7 C -0.07 -0.34 4.37 -19.86 -0.09 -0.42 16 8 C -0.10 0.32 5.83 29.10 0.17 0.49 16 9 C 0.51 1.52 7.82 87.65 0.69 2.20 16 10 O -0.58 -8.67 15.65 -3.02 -0.05 -8.72 16 11 N -0.71 2.67 5.36 -440.03 -2.36 0.31 16 12 C 0.12 -0.14 4.21 45.52 0.19 0.05 16 13 H 0.09 0.46 7.50 -2.39 -0.02 0.44 16 14 C -0.12 0.85 7.39 31.12 0.23 1.08 16 15 C -0.14 0.51 4.09 -10.21 -0.04 0.47 16 16 H 0.09 -0.09 8.14 -2.38 -0.02 -0.11 16 17 C 0.07 -0.28 7.39 71.98 0.53 0.25 16 18 F -0.24 -1.20 17.36 44.97 0.78 -0.42 16 19 C -0.15 0.20 7.45 31.18 0.23 0.43 16 20 C -0.11 -0.63 9.70 22.27 0.22 -0.42 16 21 C -0.10 -0.80 9.61 22.27 0.21 -0.58 16 22 H 0.40 -3.09 8.74 -74.05 -0.65 -3.74 16 23 H 0.10 -0.18 7.96 -2.39 -0.02 -0.20 16 24 H -0.28 -1.55 7.11 99.48 0.71 -0.84 16 25 H -0.31 -3.03 7.11 99.48 0.71 -2.32 16 26 H 0.11 1.00 4.88 -2.91 -0.01 0.99 16 27 H 0.14 0.39 8.06 -2.91 -0.02 0.37 16 28 H 0.13 -1.20 8.09 -2.38 -0.02 -1.21 16 29 H 0.14 -1.26 8.09 -2.39 -0.02 -1.28 16 30 H 0.42 -4.87 8.71 -92.71 -0.81 -5.68 16 31 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 32 H 0.12 -1.46 8.07 -2.39 -0.02 -1.48 16 33 H 0.09 -0.72 8.14 -2.38 -0.02 -0.74 16 34 H 0.09 -0.76 7.86 -2.39 -0.02 -0.78 16 35 H 0.10 -0.45 7.91 -2.39 -0.02 -0.47 16 36 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 37 H 0.14 0.15 8.06 -2.91 -0.02 0.13 16 38 H 0.14 0.69 8.06 -2.91 -0.02 0.66 16 Total: 0.00 -26.91 324.15 1.03 -25.88 By element: Atomic # 1 Polarization: -16.40 SS G_CDS: -0.34 Total: -16.73 kcal Atomic # 6 Polarization: -2.08 SS G_CDS: 2.84 Total: 0.76 kcal Atomic # 7 Polarization: 2.67 SS G_CDS: -2.36 Total: 0.31 kcal Atomic # 8 Polarization: -10.70 SS G_CDS: -1.95 Total: -12.65 kcal Atomic # 9 Polarization: -1.20 SS G_CDS: 0.78 Total: -0.42 kcal Atomic # 14 Polarization: 0.80 SS G_CDS: 2.04 Total: 2.84 kcal Total: -26.91 1.03 -25.88 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12335836.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.773 kcal (2) G-P(sol) polarization free energy of solvation -26.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.883 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.656 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds