Wall clock time and date at job start Tue Mar 9 2021 13:08:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.46818 * 2 1 4 4 C 1.50699 * 109.47486 * 120.00014 * 2 1 3 5 5 C 1.34455 * 126.47885 * 255.02377 * 4 2 1 6 6 N 1.36568 * 109.97843 * 179.97438 * 5 4 2 7 7 C 1.37822 * 109.86251 * 0.02562 * 6 5 4 8 8 C 1.38655 * 133.37724 * 179.71261 * 7 6 5 9 9 C 1.39321 * 119.66485 * 179.83774 * 8 7 6 10 10 C 1.47576 * 119.82898 * 180.21810 * 9 8 7 11 11 O 1.21591 * 120.00502 * 0.25249 * 10 9 8 12 12 N 1.34786 * 119.99678 * 180.26167 * 10 9 8 13 13 C 1.46493 * 119.99784 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.85430 * 336.19346 * 13 12 10 15 15 C 1.53779 * 113.61840 * 107.50001 * 13 12 10 16 16 C 1.53774 * 87.08498 * 139.97784 * 15 13 12 17 17 H 1.09000 * 113.69191 * 89.12595 * 16 15 13 18 18 C 1.53001 * 113.61579 * 220.02208 * 16 15 13 19 19 F 1.39896 * 109.46929 * 277.49296 * 18 16 15 20 20 C 1.53782 * 113.61433 * 204.99947 * 13 12 10 21 21 C 1.40197 * 120.33367 * 0.47262 * 9 8 7 22 22 C 1.36228 * 120.38080 * 359.76611 * 21 9 8 23 23 C 1.39878 * 119.96362 * 359.97438 * 22 21 9 24 24 H 0.96697 * 113.99631 * 299.99114 * 1 2 3 25 25 H 1.09001 * 109.46745 * 240.00307 * 2 1 3 26 26 H 1.48506 * 110.00224 * 178.68649 * 3 2 1 27 27 H 1.48504 * 110.00087 * 300.00069 * 3 2 1 28 28 H 1.07999 * 125.01026 * 359.93528 * 5 4 2 29 29 H 0.97002 * 125.06445 * 179.97438 * 6 5 4 30 30 H 1.07996 * 120.16494 * 0.31046 * 8 7 6 31 31 H 0.96993 * 119.99637 * 359.97438 * 12 10 9 32 32 H 1.08995 * 113.61468 * 254.53062 * 15 13 12 33 33 H 1.09005 * 113.61432 * 25.42834 * 15 13 12 34 34 H 1.08990 * 109.47446 * 37.49599 * 18 16 15 35 35 H 1.09005 * 109.47080 * 157.50061 * 18 16 15 36 36 H 1.09007 * 113.61064 * 334.56396 * 20 13 12 37 37 H 1.08999 * 113.62043 * 105.46604 * 20 13 12 38 38 H 1.08001 * 119.81037 * 179.78200 * 21 9 8 39 39 H 1.08006 * 120.02065 * 180.02562 * 22 21 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4613 -0.1362 2.3246 6 7 2.8029 -1.0946 3.2356 7 6 2.4948 -2.3430 2.7396 8 6 2.6359 -3.6282 3.2406 9 6 2.2142 -4.7155 2.4784 10 6 2.3582 -6.0846 3.0101 11 8 2.8396 -6.2612 4.1126 12 7 1.9563 -7.1394 2.2735 13 6 2.0997 -8.4984 2.8011 14 1 2.8789 -8.5783 3.5591 15 6 0.7662 -9.1424 3.2157 16 6 1.2986 -10.4502 2.6068 17 1 1.8580 -11.0655 3.3115 18 6 0.2409 -11.2424 1.8357 19 9 -0.5176 -12.0028 2.7321 20 6 2.1905 -9.5769 1.7086 21 6 1.6587 -4.5160 1.2068 22 6 1.5209 -3.2570 0.7049 23 6 1.9346 -2.1547 1.4602 24 1 -0.3932 0.4416 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 3.5346 1.7704 0.0320 27 1 1.5613 2.4679 -1.2085 28 1 2.5974 0.9263 2.4625 29 1 3.2033 -0.9224 4.1021 30 1 3.0634 -3.7850 4.2198 31 1 1.5720 -6.9984 1.3941 32 1 0.6214 -9.1903 4.2949 33 1 -0.0974 -8.7355 2.6895 34 1 -0.4121 -10.5524 1.3015 35 1 0.7315 -11.9046 1.1222 36 1 1.7163 -9.2889 0.7703 37 1 3.1955 -9.9758 1.5711 38 1 1.3378 -5.3652 0.6217 39 1 1.0918 -3.1100 -0.2752 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12335838.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:54 Heat of formation + Delta-G solvation = -34.280577 kcal Electronic energy + Delta-G solvation = -23835.717208 eV Core-core repulsion = 20046.243711 eV Total energy + Delta-G solvation = -3789.473497 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.121 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.49859 -42.49704 -41.17078 -39.51276 -37.86125 -37.44038 -34.70526 -33.26434 -30.84859 -30.72112 -29.23570 -26.85716 -26.54875 -25.19420 -23.64219 -23.11259 -21.48344 -20.93867 -20.70920 -19.38782 -18.31742 -17.90142 -17.41196 -17.03660 -16.93370 -16.79261 -16.30150 -16.05388 -15.96530 -15.67969 -15.53918 -15.14254 -15.11227 -14.74939 -14.72835 -14.30716 -14.02325 -13.64812 -13.58630 -13.18360 -12.88349 -12.64193 -12.55411 -12.32425 -12.24679 -12.07043 -11.93206 -11.61747 -11.32957 -10.87716 -10.76582 -10.36929 -10.06256 -9.36747 -8.82730 -5.11539 -0.27374 0.38249 1.27238 1.35556 1.60680 1.86992 1.95742 1.99680 2.22800 2.91625 3.25157 3.31441 3.49785 3.53333 3.57031 3.67657 3.74087 3.75526 3.84811 3.98631 4.08232 4.08319 4.14639 4.30770 4.40940 4.46482 4.51855 4.52706 4.54422 4.63520 4.71831 4.79028 4.88068 4.96995 4.97416 5.18125 5.23470 5.42117 5.43106 5.54014 5.59557 5.97250 6.34819 6.48527 6.63602 7.23058 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.030 4.030 3 Si 0.685 3.315 4 C -0.211 4.211 5 C 0.077 3.923 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.056 4.056 9 C -0.122 4.122 10 C 0.565 3.435 11 O -0.538 6.538 12 N -0.717 5.717 13 C 0.124 3.876 14 H 0.119 0.881 15 C -0.146 4.146 16 C -0.144 4.144 17 H 0.107 0.893 18 C 0.073 3.927 19 F -0.216 7.216 20 C -0.138 4.138 21 C -0.114 4.114 22 C -0.073 4.073 23 C -0.064 4.064 24 H 0.377 0.623 25 H 0.111 0.889 26 H -0.256 1.256 27 H -0.254 1.254 28 H 0.179 0.821 29 H 0.422 0.578 30 H 0.136 0.864 31 H 0.402 0.598 32 H 0.078 0.922 33 H 0.088 0.912 34 H 0.075 0.925 35 H 0.077 0.923 36 H 0.091 0.909 37 H 0.082 0.918 38 H 0.125 0.875 39 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.048 3.519 -1.315 3.757 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.586 3.414 4 C -0.219 4.219 5 C -0.051 4.051 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.077 4.077 9 C -0.127 4.127 10 C 0.353 3.647 11 O -0.415 6.415 12 N -0.368 5.368 13 C 0.019 3.981 14 H 0.137 0.863 15 C -0.185 4.185 16 C -0.164 4.164 17 H 0.125 0.875 18 C 0.018 3.982 19 F -0.198 7.198 20 C -0.176 4.176 21 C -0.133 4.133 22 C -0.091 4.091 23 C -0.069 4.069 24 H 0.224 0.776 25 H 0.128 0.872 26 H -0.181 1.181 27 H -0.179 1.179 28 H 0.196 0.804 29 H 0.260 0.740 30 H 0.154 0.846 31 H 0.238 0.762 32 H 0.097 0.903 33 H 0.107 0.893 34 H 0.093 0.907 35 H 0.095 0.905 36 H 0.109 0.891 37 H 0.101 0.899 38 H 0.143 0.857 39 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.016 3.702 -1.368 4.075 hybrid contribution 0.083 -0.498 -0.144 0.525 sum 1.100 3.204 -1.512 3.710 Atomic orbital electron populations 1.86506 1.17416 1.81765 1.49013 1.24333 0.84764 1.08875 0.96159 0.95263 0.80739 0.77350 0.88011 1.20732 1.10834 0.92127 0.98195 1.21754 0.99746 0.94349 0.89295 1.41724 1.54664 1.04019 1.18204 1.18078 1.03214 0.86303 0.94901 1.20085 0.99383 0.88081 1.00161 1.19428 1.05031 0.92353 0.95867 1.18203 0.77207 0.84648 0.84657 1.90793 1.44459 1.86193 1.20095 1.45869 1.64195 1.05748 1.20967 1.22505 0.98773 0.79457 0.97324 0.86296 1.23549 0.97871 0.94646 1.02443 1.23012 0.97719 0.96147 0.99481 0.87497 1.21967 0.92099 0.93829 0.90274 1.92786 1.78057 1.78063 1.70857 1.23337 1.00964 0.95530 0.97764 1.20671 1.00660 0.97315 0.94683 1.20201 0.98748 0.90498 0.99681 1.19177 1.00999 0.93086 0.93594 0.77570 0.87151 1.18091 1.17892 0.80423 0.73985 0.84604 0.76233 0.90348 0.89310 0.90665 0.90514 0.89082 0.89907 0.85696 0.85216 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.04 12.88 -35.23 -0.45 -0.42 16 2 C -0.03 0.02 3.06 36.00 0.11 0.13 16 3 Si 0.68 -1.47 30.75 -169.99 -5.23 -6.69 16 4 C -0.21 0.04 5.57 -102.74 -0.57 -0.54 16 5 C 0.08 -0.17 10.43 -16.78 -0.17 -0.35 16 6 N -0.58 0.90 6.07 -10.68 -0.06 0.83 16 7 C 0.08 0.10 7.26 -84.00 -0.61 -0.51 16 8 C -0.06 -0.11 9.61 -39.02 -0.37 -0.49 16 9 C -0.12 -0.23 5.87 -104.95 -0.62 -0.85 16 10 C 0.56 1.61 7.76 -12.45 -0.10 1.51 16 11 O -0.54 -3.46 15.91 5.29 0.08 -3.38 16 12 N -0.72 0.18 5.30 -54.04 -0.29 -0.11 16 13 C 0.12 -0.06 4.24 -67.12 -0.28 -0.34 16 14 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 15 C -0.15 0.10 7.43 -25.92 -0.19 -0.09 16 16 C -0.14 0.24 4.10 -89.81 -0.37 -0.13 16 17 H 0.11 -0.14 8.14 -51.93 -0.42 -0.57 16 18 C 0.07 -0.11 7.35 37.16 0.27 0.17 16 19 F -0.22 -0.53 17.36 2.25 0.04 -0.49 16 20 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 21 C -0.11 -0.02 9.46 -39.57 -0.37 -0.39 16 22 C -0.07 -0.07 10.03 -39.69 -0.40 -0.47 16 23 C -0.06 -0.10 6.35 -105.05 -0.67 -0.77 16 24 H 0.38 -1.48 8.70 45.56 0.40 -1.08 16 25 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 26 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 27 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 28 H 0.18 -1.06 6.35 -52.49 -0.33 -1.39 16 29 H 0.42 -1.80 8.96 -40.82 -0.37 -2.16 16 30 H 0.14 0.25 7.62 -52.49 -0.40 -0.15 16 31 H 0.40 -1.14 6.72 -40.82 -0.27 -1.42 16 32 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.09 -0.11 7.96 -51.93 -0.41 -0.52 16 34 H 0.08 -0.21 7.94 -51.93 -0.41 -0.62 16 35 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 36 H 0.09 -0.38 8.08 -51.93 -0.42 -0.80 16 37 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.13 -0.34 6.36 -52.49 -0.33 -0.68 16 39 H 0.13 -0.02 8.06 -52.48 -0.42 -0.45 16 LS Contribution 333.13 15.07 5.02 5.02 Total: 0.00 -9.88 333.13 -10.10 -19.97 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -4.67 Total: -11.83 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -4.54 Total: -2.91 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.35 Total: 0.73 kcal Atomic # 8 Polarization: -3.43 SS G_CDS: -0.37 Total: -3.80 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.23 Total: -6.69 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -9.88 -10.10 -19.97 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12335838.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.307 kcal (2) G-P(sol) polarization free energy of solvation -9.878 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.973 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.281 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds