Wall clock time and date at job start Tue Mar 9 2021 13:09:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.34845 * 125.90062 * 2 1 4 4 C 1.40941 * 107.46731 * 179.80475 * 3 2 1 5 5 C 1.50701 * 126.26843 * 180.28003 * 4 3 2 6 6 O 1.42895 * 109.47401 * 255.11629 * 5 4 3 7 7 Si 1.86299 * 109.46931 * 15.12045 * 5 4 3 8 8 C 1.34852 * 107.46587 * 0.38508 * 4 3 2 9 9 C 1.50703 * 125.90041 * 179.88517 * 8 4 3 10 10 N 1.36562 * 108.20197 * 359.61829 * 8 4 3 11 11 C 1.40228 * 125.67236 * 180.22692 * 10 8 4 12 12 C 1.38546 * 119.99032 * 244.72898 * 11 10 8 13 13 C 1.39505 * 119.78235 * 179.72722 * 12 11 10 14 14 C 1.47857 * 120.11547 * 180.26626 * 13 12 11 15 15 O 1.21549 * 119.99992 * 0.29527 * 14 13 12 16 16 N 1.34774 * 120.00444 * 180.29246 * 14 13 12 17 17 C 1.46497 * 120.00548 * 180.02562 * 16 14 13 18 18 H 1.09007 * 112.84687 * 336.19153 * 17 16 14 19 19 C 1.53779 * 113.62031 * 107.50061 * 17 16 14 20 20 C 1.53780 * 87.08376 * 139.98081 * 19 17 16 21 21 H 1.09005 * 113.61223 * 89.11376 * 20 19 17 22 22 C 1.52996 * 113.61806 * 220.02218 * 20 19 17 23 23 F 1.39901 * 109.46603 * 277.49806 * 22 20 19 24 24 C 1.53781 * 113.61490 * 205.00485 * 17 16 14 25 25 C 1.39573 * 119.77339 * 0.56129 * 13 12 11 26 26 C 1.38021 * 119.98632 * 359.70799 * 25 13 12 27 27 C 1.38224 * 120.21555 * 359.97438 * 26 25 13 28 28 H 1.08993 * 109.46782 * 269.95356 * 1 2 3 29 29 H 1.08999 * 109.46612 * 29.95820 * 1 2 3 30 30 H 1.08997 * 109.46933 * 149.95349 * 1 2 3 31 31 H 1.07995 * 126.26837 * 0.06410 * 3 2 1 32 32 H 1.09005 * 109.46792 * 135.11620 * 5 4 3 33 33 H 0.96707 * 113.99675 * 60.00235 * 6 5 4 34 34 H 1.48501 * 109.99743 * 179.97438 * 7 5 4 35 35 H 1.48492 * 109.99837 * 301.31610 * 7 5 4 36 36 H 1.09002 * 109.47152 * 269.68684 * 9 8 4 37 37 H 1.09001 * 109.46980 * 149.68785 * 9 8 4 38 38 H 1.09004 * 109.47113 * 29.68766 * 9 8 4 39 39 H 1.08000 * 120.11344 * 359.96928 * 12 11 10 40 40 H 0.97010 * 119.99873 * 359.97438 * 16 14 13 41 41 H 1.08996 * 113.61350 * 254.53181 * 19 17 16 42 42 H 1.09000 * 113.60902 * 25.43292 * 19 17 16 43 43 H 1.09001 * 109.47256 * 37.49432 * 22 20 19 44 44 H 1.08992 * 109.47200 * 157.50056 * 22 20 19 45 45 H 1.09003 * 113.61262 * 334.55942 * 24 17 16 46 46 H 1.08991 * 113.61824 * 105.46761 * 24 17 16 47 47 H 1.08005 * 120.01188 * 179.72959 * 25 13 12 48 48 H 1.08002 * 119.89216 * 180.02562 * 26 25 13 49 49 H 1.07996 * 119.88649 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2978 1.0923 0.0000 4 6 3.6349 0.6466 0.0046 5 6 4.8648 1.5174 0.0122 6 8 5.4591 1.5137 -1.2873 7 14 4.3898 3.2589 0.4729 8 6 3.6121 -0.7017 -0.0014 9 6 4.8178 -1.6058 -0.0019 10 7 2.3078 -1.1063 -0.0009 11 6 1.8643 -2.4366 -0.0016 12 6 1.1587 -2.9308 -1.0867 13 6 0.7245 -4.2566 -1.0852 14 6 -0.0240 -4.7934 -2.2419 15 8 -0.2574 -4.0807 -3.1985 16 7 -0.4475 -6.0728 -2.2356 17 6 -1.1887 -6.6048 -3.3818 18 1 -1.6864 -5.8275 -3.9617 19 6 -0.3752 -7.5894 -4.2383 20 6 -1.6600 -8.4260 -4.3565 21 1 -2.2862 -8.1472 -5.2040 22 6 -1.4201 -9.9342 -4.2638 23 9 -1.0231 -10.4208 -5.5139 24 6 -2.1027 -7.7899 -3.0281 25 6 0.9938 -5.0729 0.0144 26 6 1.6926 -4.5692 1.0928 27 6 2.1283 -3.2574 1.0880 28 1 -0.3632 -0.0008 1.0276 29 1 -0.3632 0.8904 -0.5132 30 1 -0.3633 -0.8895 -0.5145 31 1 1.9671 2.1204 0.0010 32 1 5.5789 1.1311 0.7395 33 1 4.8789 1.8456 -1.9861 34 1 5.5941 4.1276 0.4846 35 1 3.3924 3.7857 -0.4929 36 1 5.1081 -1.8238 -1.0297 37 1 4.5747 -2.5359 0.5119 38 1 5.6426 -1.1118 0.5116 39 1 0.9488 -2.2930 -1.9325 40 1 -0.2609 -6.6417 -1.4723 41 1 -0.0391 -7.1690 -5.1862 42 1 0.4227 -8.0896 -3.6894 43 1 -0.6378 -10.1334 -3.5313 44 1 -2.3406 -10.4303 -3.9564 45 1 -1.7771 -8.3450 -2.1483 46 1 -3.1611 -7.5315 -2.9991 47 1 0.6556 -6.0986 0.0215 48 1 1.9005 -5.2023 1.9427 49 1 2.6751 -2.8689 1.9344 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12335854.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:01 Heat of formation + Delta-G solvation = -18.191547 kcal Electronic energy + Delta-G solvation = -31416.688744 eV Core-core repulsion = 27033.073923 eV Total energy + Delta-G solvation = -4383.614821 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -48.56702 -42.86955 -41.53878 -40.20043 -39.01817 -37.68142 -35.12799 -34.14472 -33.69980 -32.43426 -30.57644 -30.14098 -29.44290 -27.17135 -26.96498 -25.68255 -24.73944 -23.73709 -23.34557 -21.91409 -21.25017 -20.87069 -20.21033 -18.76308 -17.95612 -17.47018 -17.44854 -17.32592 -17.17812 -16.87488 -16.76873 -16.15307 -16.05089 -15.84422 -15.70056 -15.40725 -15.25245 -15.03106 -14.76933 -14.66684 -14.31329 -14.11558 -14.00102 -13.79838 -13.73476 -13.53270 -13.45264 -13.31907 -13.20965 -13.05850 -12.92662 -12.66690 -12.66099 -12.48635 -12.17578 -11.99795 -11.71418 -11.54978 -11.43361 -11.08655 -10.49739 -10.38631 -10.33152 -10.16442 -9.48980 -8.75481 -4.76706 -0.53297 -0.14143 1.14786 1.50961 1.60955 1.67746 1.81789 1.88325 1.97233 2.16043 2.49451 3.14716 3.19936 3.32990 3.44620 3.51952 3.58190 3.59741 3.64914 3.76283 3.80542 3.90198 3.99742 4.01542 4.04563 4.06840 4.15715 4.31275 4.37193 4.41223 4.41596 4.42562 4.52587 4.54981 4.62352 4.65092 4.67324 4.71989 4.76439 4.80114 4.86850 4.87373 4.95847 4.97716 5.00096 5.03652 5.07717 5.21493 5.31755 5.40427 5.43246 6.05054 6.21647 6.26684 6.49321 6.64144 7.00856 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.028 3.972 3 C -0.187 4.187 4 C -0.192 4.192 5 C -0.038 4.038 6 O -0.535 6.535 7 Si 0.694 3.306 8 C 0.054 3.946 9 C -0.085 4.085 10 N -0.403 5.403 11 C 0.114 3.886 12 C -0.052 4.052 13 C -0.123 4.123 14 C 0.561 3.439 15 O -0.528 6.528 16 N -0.715 5.715 17 C 0.123 3.877 18 H 0.120 0.880 19 C -0.147 4.147 20 C -0.144 4.144 21 H 0.108 0.892 22 C 0.074 3.926 23 F -0.216 7.216 24 C -0.137 4.137 25 C -0.080 4.080 26 C -0.110 4.110 27 C -0.084 4.084 28 H 0.073 0.927 29 H 0.083 0.917 30 H 0.063 0.937 31 H 0.143 0.857 32 H 0.108 0.892 33 H 0.374 0.626 34 H -0.263 1.263 35 H -0.262 1.262 36 H 0.073 0.927 37 H 0.062 0.938 38 H 0.083 0.917 39 H 0.143 0.857 40 H 0.401 0.599 41 H 0.079 0.921 42 H 0.088 0.912 43 H 0.075 0.925 44 H 0.077 0.923 45 H 0.091 0.909 46 H 0.083 0.917 47 H 0.133 0.867 48 H 0.142 0.858 49 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.844 -4.658 6.601 8.565 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.080 4.080 3 C -0.210 4.210 4 C -0.198 4.198 5 C -0.149 4.149 6 O -0.341 6.341 7 Si 0.596 3.404 8 C -0.055 4.055 9 C -0.143 4.143 10 N -0.079 5.079 11 C 0.025 3.975 12 C -0.072 4.072 13 C -0.127 4.127 14 C 0.348 3.652 15 O -0.405 6.405 16 N -0.366 5.366 17 C 0.019 3.981 18 H 0.138 0.862 19 C -0.185 4.185 20 C -0.163 4.163 21 H 0.126 0.874 22 C 0.019 3.981 23 F -0.197 7.197 24 C -0.175 4.175 25 C -0.098 4.098 26 C -0.129 4.129 27 C -0.103 4.103 28 H 0.092 0.908 29 H 0.102 0.898 30 H 0.082 0.918 31 H 0.161 0.839 32 H 0.126 0.874 33 H 0.222 0.778 34 H -0.188 1.188 35 H -0.187 1.187 36 H 0.092 0.908 37 H 0.080 0.920 38 H 0.102 0.898 39 H 0.161 0.839 40 H 0.237 0.763 41 H 0.097 0.903 42 H 0.107 0.893 43 H 0.093 0.907 44 H 0.095 0.905 45 H 0.109 0.891 46 H 0.102 0.898 47 H 0.151 0.849 48 H 0.160 0.840 49 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -2.639 -3.845 5.958 7.566 hybrid contribution 0.017 -0.632 -0.856 1.064 sum -2.622 -4.477 5.102 7.276 Atomic orbital electron populations 1.20378 0.87856 1.03443 1.02892 1.20396 0.93477 0.84802 1.09308 1.20623 0.91929 0.97703 1.10781 1.19574 0.94804 0.92552 1.12917 1.24262 0.94417 1.08645 0.87549 1.86564 1.43755 1.86849 1.16909 0.94838 0.80428 0.74501 0.90654 1.20254 0.83736 0.93968 1.07522 1.20355 0.93449 0.97414 1.03057 1.41379 1.05716 1.02722 1.58063 1.17535 1.00948 0.83928 0.95105 1.21280 0.94530 0.94472 0.96872 1.19774 1.02754 0.94533 0.95605 1.18200 0.78739 0.81848 0.86378 1.90821 1.56272 1.58118 1.35270 1.45871 1.57284 1.12109 1.21378 1.22555 0.93129 0.94808 0.87628 0.86169 1.23553 0.96747 0.96927 1.01300 1.23016 0.99324 0.94342 0.99665 0.87415 1.21960 1.01178 0.93160 0.81846 1.92792 1.92765 1.89300 1.44853 1.23335 1.00829 0.96064 0.97304 1.21417 0.96451 0.99472 0.92489 1.21062 0.97955 0.94951 0.98907 1.21466 0.98280 0.93911 0.96684 0.90787 0.89845 0.91787 0.83909 0.87407 0.77845 1.18846 1.18666 0.90821 0.91954 0.89787 0.83918 0.76306 0.90264 0.89309 0.90686 0.90451 0.89063 0.89799 0.84913 0.84045 0.84513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.00 10.08 36.01 0.36 0.36 16 2 C 0.03 0.05 6.80 -81.68 -0.56 -0.50 16 3 C -0.19 -0.37 9.27 -39.76 -0.37 -0.74 16 4 C -0.19 -0.41 5.35 -104.80 -0.56 -0.97 16 5 C -0.04 -0.05 2.60 36.01 0.09 0.04 16 6 O -0.53 -1.54 12.88 -35.23 -0.45 -1.99 16 7 Si 0.69 0.43 30.87 -169.99 -5.25 -4.82 16 8 C 0.05 0.12 6.81 -81.69 -0.56 -0.44 16 9 C -0.09 -0.05 9.87 36.01 0.36 0.31 16 10 N -0.40 -0.79 2.79 -52.61 -0.15 -0.94 16 11 C 0.11 0.09 5.02 -83.64 -0.42 -0.33 16 12 C -0.05 -0.07 8.29 -39.00 -0.32 -0.40 16 13 C -0.12 0.00 5.87 -104.99 -0.62 -0.62 16 14 C 0.56 0.79 7.77 -12.32 -0.10 0.69 16 15 O -0.53 -2.91 15.94 5.32 0.08 -2.82 16 16 N -0.72 1.30 5.30 -53.96 -0.29 1.01 16 17 C 0.12 -0.20 4.24 -67.12 -0.28 -0.48 16 18 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 19 C -0.15 0.24 7.43 -25.92 -0.19 0.04 16 20 C -0.14 0.36 4.10 -89.81 -0.37 0.00 16 21 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 22 C 0.07 -0.16 7.35 37.16 0.27 0.11 16 23 F -0.22 -0.39 17.36 2.25 0.04 -0.35 16 24 C -0.14 0.53 7.39 -25.91 -0.19 0.33 16 25 C -0.08 0.23 9.54 -39.16 -0.37 -0.15 16 26 C -0.11 0.33 10.02 -39.67 -0.40 -0.07 16 27 C -0.08 0.11 8.76 -39.32 -0.34 -0.24 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 29 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.06 0.03 6.83 -51.93 -0.35 -0.33 16 31 H 0.14 0.11 6.52 -52.49 -0.34 -0.23 16 32 H 0.11 0.06 7.50 -51.93 -0.39 -0.33 16 33 H 0.37 0.21 8.70 45.56 0.40 0.61 16 34 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 35 H -0.26 -0.70 7.01 56.52 0.40 -0.31 16 36 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 37 H 0.06 -0.03 6.84 -51.93 -0.36 -0.39 16 38 H 0.08 -0.01 7.49 -51.93 -0.39 -0.40 16 39 H 0.14 0.42 7.65 -52.49 -0.40 0.02 16 40 H 0.40 -1.92 6.76 -40.82 -0.28 -2.19 16 41 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 42 H 0.09 -0.20 7.96 -51.93 -0.41 -0.62 16 43 H 0.07 -0.28 7.94 -51.93 -0.41 -0.69 16 44 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 45 H 0.09 -0.49 8.08 -51.93 -0.42 -0.91 16 46 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 47 H 0.13 -0.78 6.40 -52.48 -0.34 -1.12 16 48 H 0.14 -0.76 8.06 -52.49 -0.42 -1.19 16 49 H 0.14 -0.29 8.06 -52.49 -0.42 -0.71 16 LS Contribution 405.09 15.07 6.10 6.10 Total: 0.00 -8.84 405.09 -11.56 -20.40 By element: Atomic # 1 Polarization: -6.46 SS G_CDS: -7.09 Total: -13.54 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -4.56 Total: -3.04 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -0.43 Total: 0.07 kcal Atomic # 8 Polarization: -4.45 SS G_CDS: -0.37 Total: -4.82 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: 0.43 SS G_CDS: -5.25 Total: -4.82 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -8.84 -11.56 -20.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12335854.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.206 kcal (2) G-P(sol) polarization free energy of solvation -8.840 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.558 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.398 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds