Wall clock time and date at job start Tue Mar 9 2021 13:09:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86293 * 109.47390 * 2 1 4 4 C 1.50703 * 109.46848 * 120.00077 * 2 1 3 5 5 C 1.38318 * 119.91919 * 244.97196 * 4 2 1 6 6 C 1.38465 * 120.28367 * 180.02562 * 5 4 2 7 7 Br 1.89101 * 119.93948 * 180.02562 * 6 5 4 8 8 C 1.38032 * 120.12565 * 359.69940 * 6 5 4 9 9 C 1.39589 * 119.83700 * 0.55580 * 8 6 5 10 10 C 1.47849 * 120.13899 * 179.74178 * 9 8 6 11 11 O 1.21553 * 119.99954 * 179.72177 * 10 9 8 12 12 N 1.34777 * 119.99699 * 359.97438 * 10 9 8 13 13 C 1.46505 * 119.99724 * 179.72334 * 12 10 9 14 14 H 1.09003 * 112.85233 * 23.80421 * 13 12 10 15 15 C 1.53783 * 113.61417 * 155.00390 * 13 12 10 16 16 C 1.53782 * 87.07834 * 139.97969 * 15 13 12 17 17 H 1.08999 * 113.61273 * 89.11892 * 16 15 13 18 18 C 1.53007 * 113.60950 * 219.93040 * 16 15 13 19 19 F 1.39904 * 109.46541 * 185.00075 * 18 16 15 20 20 C 1.53771 * 87.08417 * 334.56421 * 16 15 13 21 21 C 1.37978 * 119.92320 * 64.99439 * 4 2 1 22 22 H 0.96703 * 114.00230 * 59.99784 * 1 2 3 23 23 H 1.08996 * 109.47095 * 239.99562 * 2 1 3 24 24 H 1.48496 * 110.00432 * 60.00008 * 3 2 1 25 25 H 1.48501 * 110.00071 * 181.32012 * 3 2 1 26 26 H 1.07997 * 119.86224 * 0.02644 * 5 4 2 27 27 H 1.07997 * 120.08282 * 180.29254 * 8 6 5 28 28 H 0.97000 * 120.00483 * 359.72766 * 12 10 9 29 29 H 1.08994 * 113.61059 * 254.52914 * 15 13 12 30 30 H 1.08999 * 113.61462 * 25.43033 * 15 13 12 31 31 H 1.08992 * 109.47262 * 305.00416 * 18 16 15 32 32 H 1.09001 * 109.46856 * 65.00760 * 18 16 15 33 33 H 1.08993 * 113.62076 * 270.88601 * 20 16 15 34 34 H 1.09002 * 113.61254 * 139.98175 * 20 16 15 35 35 H 1.07997 * 120.06809 * 0.02562 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6394 -0.0104 2.1906 6 6 3.1048 -0.6558 3.3238 7 35 4.0713 0.3109 4.6305 8 6 2.8589 -2.0019 3.5047 9 6 2.1495 -2.7145 2.5365 10 6 1.8873 -4.1579 2.7208 11 8 1.2648 -4.7749 1.8785 12 7 2.3340 -4.7883 3.8251 13 6 2.0689 -6.2172 4.0106 14 1 1.8910 -6.7402 3.0709 15 6 3.0883 -6.9195 4.9231 16 6 1.9018 -7.6946 5.5199 17 1 1.6772 -8.6223 4.9935 18 6 1.9904 -7.8785 7.0363 19 9 0.9345 -8.6871 7.4704 20 6 1.0158 -6.5131 5.0915 21 6 1.6841 -2.0577 1.3965 22 1 -0.3934 0.4417 -0.7650 23 1 1.7923 -0.5139 -0.8899 24 1 1.5616 2.4679 1.2084 25 1 3.5346 1.7701 -0.0321 26 1 2.8301 1.0440 2.0558 27 1 3.2182 -2.5035 4.3911 28 1 2.8309 -4.2960 4.4971 29 1 3.7950 -7.5501 4.3838 30 1 3.5734 -6.2493 5.6327 31 1 2.9388 -8.3519 7.2901 32 1 1.9277 -6.9059 7.5244 33 1 0.9343 -5.7319 5.8471 34 1 0.0494 -6.8158 4.6883 35 1 1.1317 -2.6030 0.6456 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12335870.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:10 Heat of formation + Delta-G solvation = -61.245082 kcal Electronic energy + Delta-G solvation = -21320.410153 eV Core-core repulsion = 17667.365196 eV Total energy + Delta-G solvation = -3653.044957 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.021 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -48.53577 -41.71547 -40.56352 -39.21242 -37.72067 -35.01423 -33.74610 -33.08471 -30.57568 -29.53332 -27.09001 -26.93536 -25.78275 -23.29869 -22.76257 -21.58463 -20.85956 -18.91770 -18.57341 -17.96101 -17.70278 -17.16952 -16.84940 -16.77519 -16.29143 -16.11965 -15.76100 -15.60280 -15.25859 -14.90030 -14.80802 -14.40244 -14.20446 -13.71558 -13.68713 -13.60618 -12.98780 -12.73933 -12.61211 -12.46651 -12.19597 -12.13022 -11.94943 -11.66715 -11.57445 -11.39617 -11.05561 -10.56244 -10.34463 -10.14832 -9.98349 -5.11725 -0.58071 -0.23901 0.31405 1.10212 1.46985 1.54840 1.80870 1.91763 2.41727 3.04912 3.17492 3.21373 3.28784 3.44612 3.52892 3.59542 3.65541 3.79223 3.90001 3.93262 4.02389 4.04637 4.09456 4.20734 4.38277 4.43379 4.45547 4.56325 4.64392 4.70613 4.79960 4.85801 4.89984 5.00411 5.11316 5.29082 5.39232 6.28237 6.48309 7.02011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.073 4.073 3 Si 0.681 3.319 4 C -0.073 4.073 5 C -0.070 4.070 6 C -0.093 4.093 7 Br -0.032 7.032 8 C -0.054 4.054 9 C -0.128 4.128 10 C 0.564 3.436 11 O -0.525 6.525 12 N -0.716 5.716 13 C 0.124 3.876 14 H 0.121 0.879 15 C -0.138 4.138 16 C -0.144 4.144 17 H 0.108 0.892 18 C 0.073 3.927 19 F -0.216 7.216 20 C -0.147 4.147 21 C -0.014 4.014 22 H 0.386 0.614 23 H 0.082 0.918 24 H -0.246 1.246 25 H -0.250 1.250 26 H 0.135 0.865 27 H 0.140 0.860 28 H 0.401 0.599 29 H 0.083 0.917 30 H 0.091 0.909 31 H 0.077 0.923 32 H 0.075 0.925 33 H 0.089 0.911 34 H 0.079 0.921 35 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.648 2.481 -1.470 3.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.183 4.183 3 Si 0.582 3.418 4 C -0.074 4.074 5 C -0.089 4.089 6 C -0.173 4.173 7 Br 0.054 6.946 8 C -0.074 4.074 9 C -0.132 4.132 10 C 0.351 3.649 11 O -0.401 6.401 12 N -0.367 5.367 13 C 0.019 3.981 14 H 0.139 0.861 15 C -0.176 4.176 16 C -0.163 4.163 17 H 0.126 0.874 18 C 0.018 3.982 19 F -0.197 7.197 20 C -0.186 4.186 21 C -0.033 4.033 22 H 0.235 0.765 23 H 0.100 0.900 24 H -0.170 1.170 25 H -0.174 1.174 26 H 0.152 0.848 27 H 0.158 0.842 28 H 0.237 0.763 29 H 0.102 0.898 30 H 0.109 0.891 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.107 0.893 34 H 0.098 0.902 35 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.122 2.657 -0.588 4.142 hybrid contribution 0.090 -0.489 0.319 0.591 sum 3.212 2.168 -0.269 3.884 Atomic orbital electron populations 1.86494 1.16622 1.81931 1.49923 1.24660 0.86274 1.10575 0.96811 0.95019 0.81085 0.77964 0.87748 1.19328 0.98736 0.93862 0.95511 1.21105 0.96186 0.99548 0.92092 1.21588 1.04111 0.95179 0.96405 1.96835 1.72303 1.73728 1.51768 1.21262 0.95625 0.92200 0.98345 1.19974 1.02625 0.93872 0.96687 1.18100 0.78879 0.86253 0.81672 1.90821 1.39557 1.67022 1.42727 1.45895 1.57647 1.10575 1.22580 1.22565 0.96155 0.80295 0.99085 0.86083 1.23346 0.96647 0.98995 0.98620 1.23018 0.97996 0.99518 0.95752 0.87367 1.21977 0.88103 0.94463 0.93631 1.92792 1.60204 1.75739 1.90997 1.23571 0.98974 0.97393 0.98612 1.21291 0.93186 0.93015 0.95796 0.76542 0.89990 1.17044 1.17442 0.84823 0.84248 0.76341 0.89783 0.89068 0.90458 0.90656 0.89294 0.90207 0.83210 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.24 12.81 -35.23 -0.45 -0.21 16 2 C -0.07 0.06 2.79 36.01 0.10 0.16 16 3 Si 0.68 -1.25 29.84 -169.99 -5.07 -6.32 16 4 C -0.07 -0.11 5.38 -104.69 -0.56 -0.67 16 5 C -0.07 -0.11 8.40 -39.47 -0.33 -0.44 16 6 C -0.09 -0.09 6.22 -39.57 -0.25 -0.34 16 7 Br -0.03 -0.02 33.69 -68.01 -2.29 -2.31 16 8 C -0.05 0.01 9.28 -39.15 -0.36 -0.36 16 9 C -0.13 -0.18 5.87 -104.97 -0.62 -0.79 16 10 C 0.56 1.24 7.77 -12.33 -0.10 1.14 16 11 O -0.52 -3.04 15.95 5.32 0.08 -2.95 16 12 N -0.72 0.64 5.31 -53.95 -0.29 0.35 16 13 C 0.12 -0.13 4.24 -67.11 -0.28 -0.41 16 14 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 15 C -0.14 0.44 7.39 -25.92 -0.19 0.25 16 16 C -0.14 0.30 4.09 -89.81 -0.37 -0.07 16 17 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 18 C 0.07 -0.13 7.39 37.16 0.27 0.15 16 19 F -0.22 -0.48 17.36 2.25 0.04 -0.44 16 20 C -0.15 0.17 7.43 -25.92 -0.19 -0.02 16 21 C -0.01 -0.03 9.23 -39.18 -0.36 -0.39 16 22 H 0.39 -2.12 8.74 45.56 0.40 -1.72 16 23 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 24 H -0.25 -0.29 7.05 56.52 0.40 0.11 16 25 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 26 H 0.13 0.16 4.85 -52.49 -0.25 -0.09 16 27 H 0.14 -0.41 6.41 -52.49 -0.34 -0.74 16 28 H 0.40 -1.40 6.76 -40.82 -0.28 -1.67 16 29 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 30 H 0.09 -0.42 8.08 -51.93 -0.42 -0.84 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.08 -0.23 7.85 -51.93 -0.41 -0.63 16 33 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 34 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 35 H 0.15 0.34 7.65 -52.49 -0.40 -0.06 16 LS Contribution 320.82 15.07 4.83 4.83 Total: 0.00 -7.92 320.82 -10.18 -18.10 By element: Atomic # 1 Polarization: -5.46 SS G_CDS: -3.80 Total: -9.26 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -3.24 Total: -1.79 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.29 Total: 0.35 kcal Atomic # 8 Polarization: -2.80 SS G_CDS: -0.37 Total: -3.17 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.07 Total: -6.32 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.29 Total: -2.31 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -7.92 -10.18 -18.10 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12335870.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.146 kcal (2) G-P(sol) polarization free energy of solvation -7.917 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.063 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.182 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.099 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds