Wall clock time and date at job start Tue Mar 9 2021 13:09:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52997 * 109.46853 * 2 1 4 4 C 1.52998 * 109.47448 * 66.25543 * 3 2 1 5 5 C 1.53001 * 109.47127 * 186.25206 * 3 2 1 6 6 C 1.50697 * 109.47281 * 180.85660 * 5 3 2 7 7 O 1.21286 * 119.99829 * 117.56764 * 6 5 3 8 8 N 1.34774 * 120.00378 * 297.57276 * 6 5 3 9 9 C 1.46504 * 120.00231 * 185.59722 * 8 6 5 10 10 H 1.08998 * 112.85201 * 23.79892 * 9 8 6 11 11 C 1.53778 * 113.61444 * 154.99773 * 9 8 6 12 12 C 1.53786 * 87.08264 * 139.97759 * 11 9 8 13 13 H 1.09002 * 113.60991 * 89.11354 * 12 11 9 14 14 C 1.52990 * 113.61835 * 219.93486 * 12 11 9 15 15 F 1.39903 * 109.47492 * 185.00068 * 14 12 11 16 16 C 1.53785 * 113.61040 * 252.49488 * 9 8 6 17 17 N 1.46493 * 109.47359 * 300.86095 * 5 3 2 18 18 C 1.36349 * 125.63578 * 297.80882 * 17 5 3 19 19 C 1.34848 * 108.21658 * 179.97438 * 18 17 5 20 20 C 1.40893 * 107.42222 * 359.97438 * 19 18 17 21 21 C 1.34852 * 107.41028 * 359.73631 * 20 19 18 22 22 C 1.50708 * 125.88693 * 180.25705 * 21 20 19 23 23 O 1.42895 * 109.46997 * 150.19782 * 22 21 20 24 24 Si 1.86299 * 109.46939 * 30.19779 * 22 21 20 25 25 H 1.09005 * 109.47034 * 180.02562 * 1 2 3 26 26 H 1.09001 * 109.47517 * 300.00048 * 1 2 3 27 27 H 1.09000 * 109.47486 * 60.00005 * 1 2 3 28 28 H 1.08996 * 109.47031 * 119.99907 * 2 1 3 29 29 H 1.08997 * 109.47044 * 240.00074 * 2 1 3 30 30 H 1.08996 * 109.47532 * 306.25413 * 3 2 1 31 31 H 1.09001 * 109.47486 * 48.79390 * 4 3 2 32 32 H 1.08997 * 109.47584 * 168.79693 * 4 3 2 33 33 H 1.09008 * 109.47152 * 288.79896 * 4 3 2 34 34 H 1.09000 * 109.46878 * 60.85884 * 5 3 2 35 35 H 0.97000 * 120.00123 * 5.59215 * 8 6 5 36 36 H 1.09000 * 113.61603 * 254.52232 * 11 9 8 37 37 H 1.09001 * 113.61468 * 25.43097 * 11 9 8 38 38 H 1.09002 * 109.47251 * 305.00373 * 14 12 11 39 39 H 1.09002 * 109.47176 * 64.99467 * 14 12 11 40 40 H 1.09000 * 113.61598 * 334.56179 * 16 9 8 41 41 H 1.08998 * 113.61388 * 105.47323 * 16 9 8 42 42 H 1.08000 * 125.88922 * 0.02562 * 18 17 5 43 43 H 1.08007 * 126.29028 * 179.97438 * 19 18 17 44 44 H 1.07995 * 126.29391 * 180.02562 * 20 19 18 45 45 H 1.09005 * 109.46594 * 270.20167 * 22 21 20 46 46 H 0.96691 * 114.00341 * 299.99661 * 23 22 21 47 47 H 1.48500 * 110.00158 * 58.68431 * 24 22 21 48 48 H 1.48507 * 109.99812 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 1.6623 2.1170 1.3203 5 6 3.5618 1.4454 -0.1571 6 6 4.0663 2.8653 -0.1360 7 8 4.8202 3.2280 0.7421 8 7 3.6797 3.7322 -1.0928 9 6 4.2637 5.0748 -1.1442 10 1 5.2423 5.1293 -0.6673 11 6 4.2242 5.7105 -2.5439 12 6 3.8675 7.0341 -1.8467 13 1 4.7376 7.6254 -1.5612 14 6 2.8105 7.8530 -2.5900 15 9 2.6355 9.0828 -1.9463 16 6 3.2966 6.1845 -0.6989 17 7 4.1680 0.6953 0.9456 18 6 4.0801 1.0165 2.2678 19 6 4.7639 0.0922 2.9725 20 6 5.2928 -0.8339 2.0518 21 6 4.9072 -0.4434 0.8200 22 6 5.2399 -1.1426 -0.4730 23 8 4.1901 -0.9227 -1.4172 24 14 5.4224 -2.9703 -0.1614 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 1.8933 -0.5138 0.8900 29 1 1.8933 -0.5138 -0.8900 30 1 1.5881 1.9876 -0.8287 31 1 1.9414 1.4698 2.1519 32 1 2.1892 3.0672 1.4067 33 1 0.5870 2.2944 1.3432 34 1 3.8301 0.9786 -1.1048 35 1 3.0148 3.4671 -1.7475 36 1 5.1929 5.7274 -3.0433 37 1 3.4268 5.3221 -3.1775 38 1 3.1376 8.0230 -3.6157 39 1 1.8664 7.3081 -2.5955 40 1 2.2457 5.9258 -0.8282 41 1 3.5166 6.5840 0.2911 42 1 3.5531 1.8644 2.6797 43 1 4.8840 0.0665 4.0455 44 1 5.8925 -1.7000 2.2893 45 1 6.1747 -0.7466 -0.8700 46 1 3.3273 -1.2507 -1.1294 47 1 4.1651 -3.5161 0.4099 48 1 5.7512 -3.6711 -1.4287 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12360566.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:13 Heat of formation + Delta-G solvation = -42.942558 kcal Electronic energy + Delta-G solvation = -29747.128084 eV Core-core repulsion = 25719.806921 eV Total energy + Delta-G solvation = -4027.321163 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.184 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -48.56466 -42.82686 -41.11106 -39.51221 -38.09816 -37.65665 -34.78674 -33.35562 -31.15439 -30.57871 -29.67333 -28.08322 -26.95837 -26.03481 -25.38876 -23.71518 -22.02989 -21.57682 -21.41815 -21.03357 -20.33769 -18.74229 -18.05110 -17.74012 -17.17979 -17.01571 -16.95530 -16.83256 -16.33936 -16.14491 -15.91943 -15.68054 -15.32315 -15.08850 -14.89683 -14.53381 -14.42971 -14.18032 -13.94861 -13.75055 -13.68194 -13.57358 -13.26178 -13.13859 -13.04242 -13.00540 -12.62958 -12.53399 -12.32709 -12.20456 -12.12912 -11.95037 -11.87922 -11.70341 -11.68780 -11.42231 -10.99320 -10.72963 -10.19675 -9.40170 -8.74294 -4.91763 1.10196 1.33359 1.42203 1.67083 1.80757 2.00461 2.19392 2.31801 3.00793 3.14860 3.20456 3.25848 3.42185 3.46318 3.57290 3.58889 3.77306 3.80158 3.91026 3.98852 4.01864 4.06474 4.18632 4.29069 4.33409 4.39562 4.40301 4.42517 4.47498 4.53451 4.54965 4.67512 4.71111 4.76319 4.77778 4.80599 4.85187 4.86626 4.89480 4.92373 5.09166 5.13408 5.18576 5.35781 5.47519 5.52396 6.05744 6.22273 6.28382 6.43714 6.53032 7.02398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.121 4.121 3 C -0.093 4.093 4 C -0.166 4.166 5 C 0.103 3.897 6 C 0.509 3.491 7 O -0.515 6.515 8 N -0.718 5.718 9 C 0.126 3.874 10 H 0.117 0.883 11 C -0.137 4.137 12 C -0.144 4.144 13 H 0.107 0.893 14 C 0.074 3.926 15 F -0.216 7.216 16 C -0.145 4.145 17 N -0.412 5.412 18 C 0.020 3.980 19 C -0.205 4.205 20 C -0.181 4.181 21 C -0.025 4.025 22 C -0.052 4.052 23 O -0.539 6.539 24 Si 0.713 3.287 25 H 0.058 0.942 26 H 0.059 0.941 27 H 0.056 0.944 28 H 0.072 0.928 29 H 0.062 0.938 30 H 0.090 0.910 31 H 0.075 0.925 32 H 0.057 0.943 33 H 0.066 0.934 34 H 0.148 0.852 35 H 0.401 0.599 36 H 0.082 0.918 37 H 0.091 0.909 38 H 0.077 0.923 39 H 0.075 0.925 40 H 0.088 0.912 41 H 0.077 0.923 42 H 0.161 0.839 43 H 0.137 0.863 44 H 0.144 0.856 45 H 0.118 0.882 46 H 0.373 0.627 47 H -0.257 1.257 48 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.381 -1.636 -3.016 4.176 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.158 4.158 3 C -0.113 4.113 4 C -0.223 4.223 5 C -0.004 4.004 6 C 0.293 3.707 7 O -0.389 6.389 8 N -0.370 5.370 9 C 0.021 3.979 10 H 0.135 0.865 11 C -0.176 4.176 12 C -0.163 4.163 13 H 0.125 0.875 14 C 0.019 3.981 15 F -0.197 7.197 16 C -0.184 4.184 17 N -0.089 5.089 18 C -0.110 4.110 19 C -0.229 4.229 20 C -0.206 4.206 21 C -0.135 4.135 22 C -0.161 4.161 23 O -0.349 6.349 24 Si 0.612 3.388 25 H 0.077 0.923 26 H 0.078 0.922 27 H 0.075 0.925 28 H 0.090 0.910 29 H 0.081 0.919 30 H 0.108 0.892 31 H 0.093 0.907 32 H 0.076 0.924 33 H 0.085 0.915 34 H 0.165 0.835 35 H 0.236 0.764 36 H 0.101 0.899 37 H 0.109 0.891 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.106 0.894 41 H 0.096 0.904 42 H 0.179 0.821 43 H 0.155 0.845 44 H 0.161 0.839 45 H 0.136 0.864 46 H 0.224 0.776 47 H -0.181 1.181 48 H -0.181 1.181 Dipole moment (debyes) X Y Z Total from point charges -1.777 -1.714 -3.160 4.010 hybrid contribution -1.355 0.601 -0.569 1.588 sum -3.131 -1.112 -3.729 4.994 Atomic orbital electron populations 1.21789 0.94689 1.02264 1.02240 1.21663 0.96868 0.94939 1.02319 1.21499 0.91163 0.98391 1.00218 1.22281 1.02278 1.00669 0.97053 1.21833 0.94373 0.90695 0.93454 1.20658 0.81103 0.87103 0.81820 1.90794 1.35130 1.78110 1.34861 1.45916 1.44455 1.13951 1.32636 1.22505 0.98489 0.79846 0.97066 0.86486 1.23343 1.03278 0.94642 0.96312 1.23019 0.99889 0.95670 0.97737 0.87451 1.21970 0.99353 0.80837 0.95980 1.92792 1.96801 1.46064 1.84073 1.23550 0.99839 0.95711 0.99297 1.43388 1.40592 1.19564 1.05332 1.21902 1.05309 1.01711 0.82064 1.20844 1.04855 0.97976 0.99182 1.20559 1.06331 1.02687 0.91058 1.20663 1.04279 0.91961 0.96595 1.24775 0.92822 1.11937 0.86594 1.86524 1.20569 1.82004 1.45757 0.94223 0.88356 0.72317 0.83935 0.92298 0.92155 0.92488 0.90976 0.91942 0.89219 0.90661 0.92387 0.91532 0.83506 0.76383 0.89891 0.89058 0.90469 0.90684 0.89365 0.90374 0.82146 0.84546 0.83883 0.86408 0.77573 1.18077 1.18097 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.37 9.70 37.16 0.36 0.73 16 2 C -0.12 0.26 4.69 -26.73 -0.13 0.13 16 3 C -0.09 0.21 2.18 -90.62 -0.20 0.01 16 4 C -0.17 0.20 7.15 37.16 0.27 0.47 16 5 C 0.10 -0.03 2.30 -69.09 -0.16 -0.19 16 6 C 0.51 0.60 5.62 -10.99 -0.06 0.54 16 7 O -0.51 -2.76 14.95 5.55 0.08 -2.68 16 8 N -0.72 1.24 5.30 -53.02 -0.28 0.96 16 9 C 0.13 -0.17 4.20 -67.12 -0.28 -0.45 16 10 H 0.12 0.09 7.54 -51.93 -0.39 -0.30 16 11 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 12 C -0.14 0.32 4.09 -89.81 -0.37 -0.05 16 13 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 14 C 0.07 -0.14 7.39 37.15 0.27 0.13 16 15 F -0.22 -0.44 17.36 2.25 0.04 -0.40 16 16 C -0.15 0.23 7.43 -25.91 -0.19 0.03 16 17 N -0.41 -0.65 1.76 -106.71 -0.19 -0.84 16 18 C 0.02 0.05 7.68 -16.75 -0.13 -0.08 16 19 C -0.20 -0.54 10.86 -39.78 -0.43 -0.97 16 20 C -0.18 -0.32 9.43 -39.78 -0.38 -0.69 16 21 C -0.02 -0.04 6.16 -81.79 -0.50 -0.54 16 22 C -0.05 0.00 2.95 36.01 0.11 0.10 16 23 O -0.54 0.05 9.84 -35.23 -0.35 -0.30 16 24 Si 0.71 -0.58 31.15 -169.99 -5.29 -5.87 16 25 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 26 H 0.06 -0.12 6.87 -51.93 -0.36 -0.48 16 27 H 0.06 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.07 -0.03 7.72 -51.93 -0.40 -0.43 16 29 H 0.06 -0.18 5.53 -51.93 -0.29 -0.47 16 30 H 0.09 -0.36 7.61 -51.93 -0.40 -0.75 16 31 H 0.07 -0.02 5.35 -51.93 -0.28 -0.30 16 32 H 0.06 0.01 6.73 -51.93 -0.35 -0.34 16 33 H 0.07 -0.13 7.17 -51.92 -0.37 -0.50 16 34 H 0.15 -0.09 5.28 -51.93 -0.27 -0.37 16 35 H 0.40 -1.75 8.16 -40.82 -0.33 -2.08 16 36 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 37 H 0.09 -0.44 8.08 -51.93 -0.42 -0.86 16 38 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.07 -0.25 7.85 -51.93 -0.41 -0.66 16 40 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 41 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 42 H 0.16 0.35 6.08 -52.49 -0.32 0.03 16 43 H 0.14 0.19 8.06 -52.48 -0.42 -0.23 16 44 H 0.14 -0.09 6.90 -52.49 -0.36 -0.45 16 45 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 46 H 0.37 -0.64 5.54 45.56 0.25 -0.38 16 47 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 48 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 LS Contribution 368.97 15.07 5.56 5.56 Total: 0.00 -7.21 368.97 -10.11 -17.32 By element: Atomic # 1 Polarization: -5.54 SS G_CDS: -7.67 Total: -13.22 kcal Atomic # 6 Polarization: 1.46 SS G_CDS: -2.01 Total: -0.55 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -0.47 Total: 0.13 kcal Atomic # 8 Polarization: -2.71 SS G_CDS: -0.26 Total: -2.98 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: -5.29 Total: -5.87 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -7.21 -10.11 -17.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12360566.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.621 kcal (2) G-P(sol) polarization free energy of solvation -7.211 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.110 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.321 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds