Wall clock time and date at job start Tue Mar 9 2021 13:09:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86305 * 109.46903 * 2 1 4 4 C 1.50702 * 109.47211 * 240.00200 * 2 1 3 5 5 C 1.35080 * 126.07695 * 105.25378 * 4 2 1 6 6 N 1.35043 * 107.98207 * 179.97438 * 5 4 2 7 7 C 1.46490 * 125.93078 * 179.97438 * 6 5 4 8 8 C 1.50696 * 109.47279 * 125.00235 * 7 6 5 9 9 O 1.21285 * 119.99706 * 359.97438 * 8 7 6 10 10 N 1.34774 * 120.00394 * 179.97438 * 8 7 6 11 11 C 1.46504 * 120.00331 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.84726 * 23.80568 * 11 10 8 13 13 C 1.53784 * 113.61086 * 154.99599 * 11 10 8 14 14 C 1.53789 * 87.07702 * 139.98573 * 13 11 10 15 15 H 1.09000 * 113.61531 * 89.11187 * 14 13 11 16 16 C 1.53000 * 113.61357 * 219.93360 * 14 13 11 17 17 F 1.39900 * 109.47033 * 184.99494 * 16 14 13 18 18 C 1.53771 * 113.61580 * 252.49490 * 11 10 8 19 19 N 1.40071 * 108.13247 * 359.78732 * 6 5 4 20 20 C 1.31627 * 108.11058 * 0.35878 * 19 6 5 21 21 C 1.48422 * 126.03449 * 179.91111 * 20 19 6 22 22 C 1.39325 * 120.11732 * 136.83626 * 21 20 19 23 23 C 1.38019 * 119.87823 * 180.02562 * 22 21 20 24 24 C 1.38315 * 120.12162 * 0.02562 * 23 22 21 25 25 C 1.38321 * 120.23809 * 0.02562 * 24 23 22 26 26 C 1.38020 * 120.12335 * 359.97438 * 25 24 23 27 27 H 0.96703 * 114.00280 * 299.99774 * 1 2 3 28 28 H 1.08996 * 109.47155 * 119.99803 * 2 1 3 29 29 H 1.48502 * 110.00111 * 299.99852 * 3 2 1 30 30 H 1.48497 * 109.99988 * 61.31916 * 3 2 1 31 31 H 1.08005 * 126.00972 * 359.95453 * 5 4 2 32 32 H 1.09005 * 109.46964 * 244.99608 * 7 6 5 33 33 H 1.09003 * 109.47497 * 4.99818 * 7 6 5 34 34 H 0.97004 * 119.99773 * 359.97438 * 10 8 7 35 35 H 1.08997 * 113.61325 * 254.52967 * 13 11 10 36 36 H 1.08995 * 113.61519 * 25.44037 * 13 11 10 37 37 H 1.08996 * 109.47200 * 305.00155 * 16 14 13 38 38 H 1.09001 * 109.46810 * 64.99982 * 16 14 13 39 39 H 1.09005 * 113.61751 * 334.56920 * 18 11 10 40 40 H 1.09008 * 113.61343 * 105.46980 * 18 11 10 41 41 H 1.08008 * 120.05959 * 0.04153 * 22 21 20 42 42 H 1.08002 * 119.93824 * 180.27462 * 23 22 21 43 43 H 1.07994 * 119.88085 * 180.02562 * 24 23 22 44 44 H 1.08005 * 119.93963 * 179.97438 * 25 24 23 45 45 H 1.07998 * 120.06345 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4673 -0.1253 -2.3237 6 7 2.7917 -1.0992 -3.2011 7 6 3.4000 -0.9013 -4.5189 8 6 4.6638 -1.7163 -4.6164 9 8 5.0214 -2.3953 -3.6771 10 7 5.3967 -1.6908 -5.7471 11 6 6.6257 -2.4827 -5.8416 12 1 6.6358 -3.3315 -5.1578 13 6 7.0130 -2.8490 -7.2841 14 6 8.4705 -2.5713 -6.8797 15 1 8.9864 -3.4440 -6.4793 16 6 9.2783 -1.8463 -7.9581 17 9 10.6119 -1.7397 -7.5491 18 6 7.9088 -1.6365 -5.7954 19 7 2.4494 -2.3318 -2.6304 20 6 1.9259 -2.1024 -1.4447 21 6 1.4245 -3.1297 -0.4981 22 6 1.7210 -3.0332 0.8598 23 6 1.2527 -3.9916 1.7357 24 6 0.4907 -5.0466 1.2675 25 6 0.1942 -5.1479 -0.0798 26 6 0.6574 -4.1951 -0.9644 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5614 2.4680 -1.2085 30 1 1.5878 2.4586 1.2242 31 1 2.6108 0.9351 -2.4704 32 1 2.7017 -1.2199 -5.2930 33 1 3.6368 0.1540 -4.6551 34 1 5.1105 -1.1480 -6.4984 35 1 6.8210 -3.8918 -7.5363 36 1 6.6268 -2.1541 -8.0297 37 1 9.2278 -2.4095 -8.8899 38 1 8.8650 -0.8497 -8.1131 39 1 7.7675 -0.6101 -6.1340 40 1 8.4401 -1.7006 -4.8457 41 1 2.3162 -2.2098 1.2265 42 1 1.4783 -3.9153 2.7891 43 1 0.1258 -5.7941 1.9563 44 1 -0.4009 -5.9740 -0.4402 45 1 0.4257 -4.2753 -2.0162 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_12622748.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:25 Heat of formation + Delta-G solvation = 23.502657 kcal Electronic energy + Delta-G solvation = -29344.010910 eV Core-core repulsion = 25052.315793 eV Total energy + Delta-G solvation = -4291.695117 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.148 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.55575 -42.39649 -41.18226 -39.73664 -39.33103 -37.69922 -34.90578 -34.63628 -32.30267 -31.83396 -31.34296 -29.79651 -28.47044 -26.94562 -25.95070 -24.45774 -23.41650 -23.19729 -21.81153 -21.49411 -21.05987 -20.60733 -18.51646 -18.39668 -18.28122 -17.73988 -17.30107 -16.99865 -16.90090 -16.62632 -16.15274 -16.07508 -15.86349 -15.58702 -15.50827 -15.24932 -15.03493 -14.66225 -14.37094 -14.19963 -14.14955 -13.93179 -13.72206 -13.61575 -13.45028 -13.29747 -13.00479 -12.65744 -12.61966 -12.26912 -12.18234 -12.04764 -11.85104 -11.67935 -11.46175 -11.40611 -11.13584 -10.51627 -10.20316 -10.18149 -9.69022 -9.64082 -9.16129 -4.95141 0.30388 0.65268 0.86836 1.21599 1.34571 1.43043 1.58014 1.83172 1.95912 2.00641 3.06456 3.16220 3.21338 3.26839 3.39639 3.50185 3.58078 3.62296 3.67714 3.81312 3.86314 3.91722 4.02875 4.05111 4.07714 4.20788 4.21224 4.34940 4.40562 4.42199 4.43335 4.55368 4.65406 4.69789 4.70256 4.79046 4.86764 4.87989 4.94842 5.10124 5.13597 5.26567 5.36318 5.43992 5.73035 5.75135 5.78141 5.87175 6.18831 6.28338 6.59215 6.73710 7.04971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.035 4.035 3 Si 0.676 3.324 4 C -0.202 4.202 5 C 0.066 3.934 6 N -0.359 5.359 7 C 0.116 3.884 8 C 0.500 3.500 9 O -0.501 6.501 10 N -0.721 5.721 11 C 0.126 3.874 12 H 0.119 0.881 13 C -0.137 4.137 14 C -0.145 4.145 15 H 0.107 0.893 16 C 0.074 3.926 17 F -0.216 7.216 18 C -0.146 4.146 19 N -0.248 5.248 20 C 0.131 3.869 21 C -0.005 4.005 22 C -0.096 4.096 23 C -0.120 4.120 24 C -0.114 4.114 25 C -0.120 4.120 26 C -0.092 4.092 27 H 0.375 0.625 28 H 0.073 0.927 29 H -0.254 1.254 30 H -0.259 1.259 31 H 0.178 0.822 32 H 0.118 0.882 33 H 0.129 0.871 34 H 0.402 0.598 35 H 0.082 0.918 36 H 0.091 0.909 37 H 0.077 0.923 38 H 0.075 0.925 39 H 0.088 0.912 40 H 0.078 0.922 41 H 0.126 0.874 42 H 0.126 0.874 43 H 0.123 0.877 44 H 0.125 0.875 45 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.472 3.608 -3.276 4.896 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.146 4.146 3 Si 0.577 3.423 4 C -0.214 4.214 5 C -0.079 4.079 6 N -0.141 5.141 7 C -0.009 4.009 8 C 0.283 3.717 9 O -0.373 6.373 10 N -0.373 5.373 11 C 0.021 3.979 12 H 0.137 0.863 13 C -0.176 4.176 14 C -0.164 4.164 15 H 0.125 0.875 16 C 0.019 3.981 17 F -0.197 7.197 18 C -0.185 4.185 19 N -0.068 5.068 20 C -0.035 4.035 21 C -0.007 4.007 22 C -0.115 4.115 23 C -0.138 4.138 24 C -0.133 4.133 25 C -0.138 4.138 26 C -0.111 4.111 27 H 0.223 0.777 28 H 0.091 0.909 29 H -0.179 1.179 30 H -0.183 1.183 31 H 0.195 0.805 32 H 0.136 0.864 33 H 0.147 0.853 34 H 0.237 0.763 35 H 0.101 0.899 36 H 0.110 0.890 37 H 0.095 0.905 38 H 0.093 0.907 39 H 0.107 0.893 40 H 0.096 0.904 41 H 0.143 0.857 42 H 0.144 0.856 43 H 0.141 0.859 44 H 0.143 0.857 45 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 1.044 2.810 -4.157 5.125 hybrid contribution -1.352 0.834 0.538 1.677 sum -0.308 3.644 -3.619 5.145 Atomic orbital electron populations 1.86645 1.18087 1.79892 1.49302 1.24061 0.84044 1.09641 0.96878 0.95334 0.91514 0.74753 0.80681 1.19253 1.11814 0.92427 0.97859 1.22205 1.00374 0.95348 0.89968 1.47786 1.48136 1.04349 1.13790 1.21517 0.94068 1.02353 0.82999 1.20581 0.84927 0.82888 0.83290 1.90840 1.69742 1.39871 1.36890 1.45892 1.25583 1.49213 1.16659 1.22500 0.82304 0.95217 0.97845 0.86350 1.23340 0.94547 1.03227 0.96448 1.23022 0.95622 1.00485 0.97244 0.87456 1.21972 0.77206 1.01535 0.97424 1.92792 1.37000 1.97627 1.92328 1.23563 0.96322 0.98810 0.99779 1.77797 1.18239 1.01605 1.09170 1.20595 0.97885 0.92357 0.92658 1.17708 0.98439 0.93133 0.91410 1.21128 0.99454 0.99024 0.91902 1.21067 0.98414 0.94675 0.99682 1.21247 0.98146 0.98165 0.95714 1.21101 1.00287 0.98987 0.93465 1.21177 0.96739 0.93267 0.99907 0.77737 0.90891 1.17877 1.18324 0.80473 0.86431 0.85344 0.76336 0.89911 0.89041 0.90486 0.90661 0.89314 0.90363 0.85658 0.85640 0.85880 0.85743 0.85926 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.23 12.86 -35.23 -0.45 -1.69 16 2 C -0.04 -0.04 2.50 36.01 0.09 0.05 16 3 Si 0.68 -0.57 30.77 -169.99 -5.23 -5.80 16 4 C -0.20 -0.63 5.39 -104.76 -0.56 -1.19 16 5 C 0.07 0.09 9.96 -17.26 -0.17 -0.08 16 6 N -0.36 -0.83 3.40 -62.59 -0.21 -1.04 16 7 C 0.12 -0.25 6.99 -5.20 -0.04 -0.28 16 8 C 0.50 0.19 7.86 -10.99 -0.09 0.11 16 9 O -0.50 -2.89 15.29 5.55 0.08 -2.81 16 10 N -0.72 2.02 5.35 -53.02 -0.28 1.74 16 11 C 0.13 -0.22 4.24 -67.12 -0.28 -0.51 16 12 H 0.12 0.08 7.46 -51.93 -0.39 -0.30 16 13 C -0.14 0.52 7.39 -25.91 -0.19 0.32 16 14 C -0.14 0.36 4.09 -89.80 -0.37 -0.01 16 15 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 16 C 0.07 -0.16 7.39 37.16 0.27 0.11 16 17 F -0.22 -0.38 17.36 2.25 0.04 -0.35 16 18 C -0.15 0.29 7.43 -25.92 -0.19 0.10 16 19 N -0.25 -1.44 11.66 33.43 0.39 -1.05 16 20 C 0.13 0.69 6.67 -82.78 -0.55 0.14 16 21 C 0.00 -0.02 5.74 -104.90 -0.60 -0.63 16 22 C -0.10 -0.29 8.89 -39.26 -0.35 -0.64 16 23 C -0.12 -0.23 10.03 -39.63 -0.40 -0.63 16 24 C -0.11 -0.22 10.04 -39.52 -0.40 -0.62 16 25 C -0.12 -0.32 10.03 -39.63 -0.40 -0.72 16 26 C -0.09 -0.39 9.78 -39.26 -0.38 -0.77 16 27 H 0.38 -0.65 8.74 45.56 0.40 -0.25 16 28 H 0.07 0.00 5.56 -51.93 -0.29 -0.29 16 29 H -0.25 -0.31 7.04 56.52 0.40 0.09 16 30 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 31 H 0.18 -0.39 6.35 -52.48 -0.33 -0.72 16 32 H 0.12 -0.48 8.14 -51.93 -0.42 -0.90 16 33 H 0.13 -0.81 8.07 -51.93 -0.42 -1.23 16 34 H 0.40 -2.51 8.73 -40.82 -0.36 -2.86 16 35 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 36 H 0.09 -0.49 8.08 -51.93 -0.42 -0.91 16 37 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 38 H 0.08 -0.28 7.85 -51.93 -0.41 -0.69 16 39 H 0.09 -0.27 7.90 -51.93 -0.41 -0.68 16 40 H 0.08 -0.04 8.14 -51.92 -0.42 -0.46 16 41 H 0.13 0.16 6.21 -52.48 -0.33 -0.16 16 42 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 43 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 44 H 0.12 0.08 8.06 -52.48 -0.42 -0.34 16 45 H 0.12 0.49 8.06 -52.49 -0.42 0.06 16 LS Contribution 383.17 15.07 5.77 5.77 Total: 0.00 -12.49 383.17 -10.46 -22.95 By element: Atomic # 1 Polarization: -6.53 SS G_CDS: -5.96 Total: -12.48 kcal Atomic # 6 Polarization: -0.64 SS G_CDS: -4.61 Total: -5.25 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.11 Total: -0.35 kcal Atomic # 8 Polarization: -4.13 SS G_CDS: -0.37 Total: -4.49 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.23 Total: -5.80 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -12.49 -10.46 -22.95 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_12622748.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.449 kcal (2) G-P(sol) polarization free energy of solvation -12.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.459 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.947 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.503 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds