Wall clock time and date at job start Tue Mar 9 2021 13:09:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.46916 * 2 1 4 4 C 1.50709 * 109.47090 * 119.99593 * 2 1 3 5 5 C 1.38318 * 119.87852 * 65.00069 * 4 2 1 6 6 C 1.38017 * 120.12450 * 180.02562 * 5 4 2 7 7 C 1.39343 * 119.87428 * 359.97438 * 6 5 4 8 8 C 1.48382 * 120.11901 * 179.97438 * 7 6 5 9 9 C 1.39315 * 120.12509 * 56.76921 * 8 7 6 10 10 C 1.50703 * 120.05983 * 359.97438 * 9 8 7 11 11 C 1.50706 * 109.47024 * 81.11206 * 10 9 8 12 12 O 1.21276 * 119.99729 * 5.69454 * 11 10 9 13 13 N 1.34771 * 119.99884 * 185.69573 * 11 10 9 14 14 C 1.46497 * 119.99798 * 180.02562 * 13 11 10 15 15 H 1.08997 * 112.85011 * 23.80069 * 14 13 11 16 16 C 1.53788 * 113.61341 * 154.99884 * 14 13 11 17 17 C 1.53788 * 87.07820 * 140.06207 * 16 14 13 18 18 H 1.08999 * 113.61182 * 89.20071 * 17 16 14 19 19 C 1.53005 * 113.61253 * 220.01714 * 17 16 14 20 20 F 1.39905 * 109.47075 * 300.00295 * 19 17 16 21 21 C 1.53776 * 87.08426 * 334.56607 * 17 16 14 22 22 C 1.38041 * 119.88031 * 180.25572 * 9 8 7 23 23 C 1.38295 * 120.12063 * 359.44441 * 22 9 8 24 24 C 1.38352 * 120.24246 * 0.55624 * 23 22 9 25 25 C 1.37995 * 120.12107 * 359.72526 * 24 23 22 26 26 C 1.39333 * 119.75623 * 0.25351 * 7 6 5 27 27 C 1.38021 * 119.87913 * 359.49251 * 26 7 6 28 28 H 0.96696 * 114.00295 * 299.99926 * 1 2 3 29 29 H 1.08997 * 109.47383 * 239.99470 * 2 1 3 30 30 H 1.48498 * 109.99721 * 299.99381 * 3 2 1 31 31 H 1.48495 * 109.99964 * 61.31473 * 3 2 1 32 32 H 1.08004 * 119.93783 * 0.02562 * 5 4 2 33 33 H 1.07994 * 120.06523 * 179.97438 * 6 5 4 34 34 H 1.09005 * 109.46570 * 321.11788 * 10 9 8 35 35 H 1.08997 * 109.47425 * 201.11976 * 10 9 8 36 36 H 0.97002 * 120.00026 * 0.02562 * 13 11 10 37 37 H 1.08997 * 113.61162 * 25.51665 * 16 14 13 38 38 H 1.08994 * 113.68955 * 254.61836 * 16 14 13 39 39 H 1.08996 * 109.46732 * 180.02562 * 19 17 16 40 40 H 1.08994 * 109.47016 * 60.00314 * 19 17 16 41 41 H 1.09001 * 113.61515 * 139.97946 * 21 17 16 42 42 H 1.09004 * 113.61484 * 270.88793 * 21 17 16 43 43 H 1.07999 * 119.94015 * 179.72739 * 22 9 8 44 44 H 1.07998 * 119.88198 * 180.26207 * 23 22 9 45 45 H 1.07999 * 119.93394 * 179.74613 * 24 23 22 46 46 H 1.07998 * 120.05952 * 179.97438 * 25 24 23 47 47 H 1.08006 * 120.05702 * 179.72625 * 26 7 6 48 48 H 1.08007 * 119.93857 * 180.25271 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6832 -2.0610 1.3961 6 6 2.1404 -2.7165 2.5213 7 6 2.8537 -2.0151 3.4914 8 6 3.3473 -2.7143 4.7035 9 6 4.1779 -3.8259 4.5800 10 6 4.5770 -4.3220 3.2140 11 6 5.7182 -3.4884 2.6906 12 8 6.2316 -2.6495 3.4001 13 7 6.1682 -3.6752 1.4340 14 6 7.2779 -2.8653 0.9254 15 1 7.9099 -2.4672 1.7192 16 6 8.0659 -3.5427 -0.2083 17 6 8.1324 -2.1615 -0.8811 18 1 8.9988 -1.5715 -0.5823 19 6 7.9405 -2.2090 -2.3984 20 9 8.9421 -3.0008 -2.9705 21 6 6.8498 -1.8106 -0.1088 22 6 4.6299 -4.4758 5.7109 23 6 4.2690 -4.0182 6.9651 24 6 3.4444 -2.9148 7.0937 25 6 2.9821 -2.2611 5.9698 26 6 3.0967 -0.6537 3.3217 27 6 2.6393 -0.0094 2.1900 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 1.5615 2.4678 -1.2086 31 1 1.5877 2.4586 1.2241 32 1 1.1305 -2.6037 0.6434 33 1 1.9457 -3.7709 2.6498 34 1 3.7274 -4.2417 2.5358 35 1 4.8897 -5.3639 3.2829 36 1 5.7573 -4.3460 0.8664 37 1 7.4833 -4.2738 -0.7687 38 1 9.0385 -3.9245 0.1019 39 1 8.0002 -1.1990 -2.8038 40 1 6.9643 -2.6359 -2.6279 41 1 6.8405 -0.7935 0.2831 42 1 5.9347 -2.0683 -0.6420 43 1 5.2702 -5.3403 5.6162 44 1 4.6283 -4.5270 7.8474 45 1 3.1624 -2.5642 8.0755 46 1 2.3382 -1.4000 6.0713 47 1 3.6452 -0.1044 4.0726 48 1 2.8307 1.0451 2.0556 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13158394.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:42 Heat of formation + Delta-G solvation = -44.241736 kcal Electronic energy + Delta-G solvation = -31795.331938 eV Core-core repulsion = 27503.324885 eV Total energy + Delta-G solvation = -4292.007053 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.157 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -48.51261 -41.55215 -40.77860 -39.84028 -39.00513 -37.67373 -34.62748 -34.24202 -33.39334 -31.99543 -30.73645 -29.81845 -28.43014 -26.80320 -26.59541 -24.22061 -23.86626 -23.34671 -22.48805 -21.71545 -21.38635 -20.67286 -18.63688 -18.08604 -17.94164 -17.63521 -17.08839 -17.00784 -16.75181 -16.65074 -16.34324 -16.25635 -15.93122 -15.82966 -15.61712 -15.40470 -15.28894 -14.82246 -14.67487 -14.45033 -14.07183 -14.02768 -13.69246 -13.62314 -13.52522 -13.35766 -13.15344 -13.06689 -12.88462 -12.65092 -12.42246 -12.27850 -12.03665 -11.85693 -11.75086 -11.62756 -11.60894 -11.38240 -10.78395 -10.62795 -10.15933 -10.00882 -9.94299 -9.70095 -9.20476 -5.00418 -0.08111 0.38382 0.44854 0.63729 1.24157 1.55535 1.71029 1.92042 2.18262 2.61837 2.90697 3.26723 3.33076 3.33524 3.51629 3.54698 3.65961 3.69647 3.74272 3.86941 3.89284 3.90973 3.97715 4.01233 4.05959 4.16813 4.18250 4.25753 4.33773 4.41932 4.47635 4.52240 4.55225 4.59884 4.60568 4.68351 4.69741 4.76256 4.85833 4.91083 4.95667 4.97748 5.01431 5.10151 5.19737 5.34844 5.42117 5.46309 5.53028 5.55229 5.61705 5.68351 5.92524 6.06289 6.35518 6.50569 7.29027 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.072 4.072 3 Si 0.681 3.319 4 C -0.117 4.117 5 C -0.090 4.090 6 C -0.115 4.115 7 C -0.034 4.034 8 C -0.037 4.037 9 C -0.052 4.052 10 C -0.114 4.114 11 C 0.520 3.480 12 O -0.525 6.525 13 N -0.723 5.723 14 C 0.125 3.875 15 H 0.116 0.884 16 C -0.138 4.138 17 C -0.145 4.145 18 H 0.105 0.895 19 C 0.073 3.927 20 F -0.217 7.217 21 C -0.141 4.141 22 C -0.106 4.106 23 C -0.114 4.114 24 C -0.117 4.117 25 C -0.104 4.104 26 C -0.093 4.093 27 C -0.114 4.114 28 H 0.376 0.624 29 H 0.117 0.883 30 H -0.257 1.257 31 H -0.260 1.260 32 H 0.127 0.873 33 H 0.127 0.873 34 H 0.108 0.892 35 H 0.104 0.896 36 H 0.400 0.600 37 H 0.088 0.912 38 H 0.079 0.921 39 H 0.077 0.923 40 H 0.074 0.926 41 H 0.079 0.921 42 H 0.089 0.911 43 H 0.123 0.877 44 H 0.124 0.876 45 H 0.125 0.875 46 H 0.123 0.877 47 H 0.127 0.873 48 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.105 -1.743 -0.692 1.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.182 4.182 3 Si 0.582 3.418 4 C -0.117 4.117 5 C -0.108 4.108 6 C -0.133 4.133 7 C -0.034 4.034 8 C -0.037 4.037 9 C -0.052 4.052 10 C -0.154 4.154 11 C 0.306 3.694 12 O -0.400 6.400 13 N -0.374 5.374 14 C 0.020 3.980 15 H 0.134 0.866 16 C -0.177 4.177 17 C -0.164 4.164 18 H 0.123 0.877 19 C 0.018 3.982 20 F -0.198 7.198 21 C -0.180 4.180 22 C -0.124 4.124 23 C -0.132 4.132 24 C -0.135 4.135 25 C -0.122 4.122 26 C -0.111 4.111 27 C -0.132 4.132 28 H 0.224 0.776 29 H 0.135 0.865 30 H -0.182 1.182 31 H -0.185 1.185 32 H 0.145 0.855 33 H 0.145 0.855 34 H 0.126 0.874 35 H 0.122 0.878 36 H 0.235 0.765 37 H 0.107 0.893 38 H 0.097 0.903 39 H 0.095 0.905 40 H 0.093 0.907 41 H 0.098 0.902 42 H 0.108 0.892 43 H 0.141 0.859 44 H 0.142 0.858 45 H 0.143 0.857 46 H 0.141 0.859 47 H 0.145 0.855 48 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.169 -0.617 -0.725 0.967 hybrid contribution -1.158 -0.541 0.305 1.314 sum -0.989 -1.158 -0.420 1.580 Atomic orbital electron populations 1.86600 1.17654 1.79962 1.49347 1.24991 0.83995 1.10807 0.98450 0.94998 0.91770 0.74758 0.80226 1.20283 0.99810 0.94908 0.96733 1.20914 0.98680 0.93722 0.97512 1.21234 0.98351 0.99904 0.93765 1.18794 0.97537 0.93325 0.93724 1.18531 0.97915 0.94974 0.92311 1.19187 0.97213 0.95169 0.93646 1.20886 0.98335 1.00488 0.95677 1.20473 0.83894 0.83649 0.81370 1.90735 1.58088 1.34261 1.56884 1.45969 1.36266 1.40613 1.14592 1.22457 0.88497 0.92069 0.94945 0.86587 1.23343 1.01381 0.96536 0.96396 1.23004 1.00325 0.98883 0.94233 0.87725 1.21950 0.89296 0.94989 0.92001 1.92784 1.64082 1.76764 1.86162 1.23446 0.96966 1.00608 0.96987 1.20938 0.99519 1.00010 0.91950 1.21195 0.97881 0.96765 0.97373 1.21118 0.97810 0.95968 0.98575 1.21161 0.99938 0.99790 0.91349 1.21159 0.98876 0.93517 0.97546 1.20988 0.98475 0.99596 0.94115 0.77611 0.86512 1.18162 1.18511 0.85514 0.85544 0.87405 0.87784 0.76533 0.89304 0.90269 0.90484 0.90723 0.90195 0.89221 0.85894 0.85784 0.85732 0.85859 0.85503 0.85553 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.49 12.83 -35.23 -0.45 -0.94 16 2 C -0.07 0.05 2.80 36.01 0.10 0.15 16 3 Si 0.68 -0.64 29.87 -169.99 -5.08 -5.72 16 4 C -0.12 0.03 5.36 -104.56 -0.56 -0.53 16 5 C -0.09 0.02 9.67 -39.63 -0.38 -0.36 16 6 C -0.11 0.02 7.82 -39.25 -0.31 -0.29 16 7 C -0.03 -0.04 4.78 -104.90 -0.50 -0.54 16 8 C -0.04 -0.07 5.40 -104.90 -0.57 -0.63 16 9 C -0.05 -0.07 4.38 -104.29 -0.46 -0.52 16 10 C -0.11 0.11 5.31 -29.03 -0.15 -0.04 16 11 C 0.52 0.52 7.66 -10.99 -0.08 0.43 16 12 O -0.52 -2.72 15.65 5.56 0.09 -2.63 16 13 N -0.72 1.18 5.36 -53.01 -0.28 0.90 16 14 C 0.13 -0.16 4.24 -67.11 -0.28 -0.45 16 15 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 16 C -0.14 0.31 7.26 -25.91 -0.19 0.12 16 17 C -0.15 0.35 4.13 -89.80 -0.37 -0.02 16 18 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 19 C 0.07 -0.15 7.40 37.16 0.28 0.12 16 20 F -0.22 -0.32 17.22 2.25 0.04 -0.29 16 21 C -0.14 0.36 7.43 -25.92 -0.19 0.16 16 22 C -0.11 -0.12 9.66 -39.63 -0.38 -0.50 16 23 C -0.11 -0.11 10.04 -39.52 -0.40 -0.51 16 24 C -0.12 -0.12 10.03 -39.63 -0.40 -0.52 16 25 C -0.10 -0.16 9.62 -39.25 -0.38 -0.54 16 26 C -0.09 -0.11 9.62 -39.25 -0.38 -0.48 16 27 C -0.11 -0.01 8.65 -39.63 -0.34 -0.35 16 28 H 0.38 -0.61 8.70 45.56 0.40 -0.22 16 29 H 0.12 -0.18 7.96 -51.93 -0.41 -0.60 16 30 H -0.26 -0.59 7.11 56.52 0.40 -0.18 16 31 H -0.26 -0.30 7.00 56.52 0.40 0.10 16 32 H 0.13 -0.13 8.06 -52.48 -0.42 -0.56 16 33 H 0.13 -0.20 7.11 -52.49 -0.37 -0.57 16 34 H 0.11 -0.26 4.83 -51.93 -0.25 -0.51 16 35 H 0.10 -0.32 8.01 -51.93 -0.42 -0.73 16 36 H 0.40 -1.68 8.73 -40.82 -0.36 -2.03 16 37 H 0.09 -0.26 8.08 -51.93 -0.42 -0.68 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 39 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 40 H 0.07 -0.26 7.94 -51.93 -0.41 -0.67 16 41 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 42 H 0.09 -0.30 7.96 -51.93 -0.41 -0.71 16 43 H 0.12 -0.08 8.04 -52.49 -0.42 -0.50 16 44 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 45 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 46 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 47 H 0.13 0.12 8.06 -52.48 -0.42 -0.30 16 48 H 0.13 -0.15 4.82 -52.48 -0.25 -0.40 16 LS Contribution 398.82 15.07 6.01 6.01 Total: 0.00 -8.39 398.82 -12.36 -20.75 By element: Atomic # 1 Polarization: -6.04 SS G_CDS: -6.73 Total: -12.77 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -5.95 Total: -5.31 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -0.28 Total: 0.90 kcal Atomic # 8 Polarization: -3.21 SS G_CDS: -0.37 Total: -3.58 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.08 Total: -5.72 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -8.39 -12.36 -20.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13158394.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.496 kcal (2) G-P(sol) polarization free energy of solvation -8.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.885 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.357 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.746 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds