Wall clock time and date at job start Tue Mar 9 2021 13:09:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.34186 * 126.53987 * 255.02358 * 4 2 1 6 6 N 1.36864 * 109.96775 * 180.02562 * 5 4 2 7 7 C 1.37396 * 109.97920 * 359.97438 * 6 5 4 8 8 C 1.39339 * 133.25703 * 180.02562 * 7 6 5 9 9 C 1.36349 * 120.23653 * 179.21359 * 8 7 6 10 10 C 1.40179 * 120.67177 * 0.60448 * 9 8 7 11 11 C 1.47653 * 119.97428 * 179.60673 * 10 9 8 12 12 O 1.21572 * 120.00087 * 180.02562 * 11 10 9 13 13 N 1.34782 * 119.99946 * 0.02562 * 11 10 9 14 14 C 1.46501 * 119.99824 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.85131 * 336.20098 * 14 13 11 16 16 C 1.53788 * 113.60947 * 107.50535 * 14 13 11 17 17 C 1.53779 * 87.07906 * 139.98334 * 16 14 13 18 18 H 1.09002 * 113.69100 * 89.12556 * 17 16 14 19 19 C 1.52994 * 113.61329 * 220.01775 * 17 16 14 20 20 F 1.39901 * 109.47366 * 277.50068 * 19 17 16 21 21 C 1.53776 * 113.61463 * 205.00224 * 14 13 11 22 22 C 1.39181 * 120.04782 * 359.62833 * 10 9 8 23 23 C 1.39236 * 119.39649 * 359.97438 * 22 10 9 24 24 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 25 25 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 26 26 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 27 27 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 28 28 H 1.08003 * 125.01632 * 0.03754 * 5 4 2 29 29 H 0.97002 * 125.00818 * 180.02562 * 6 5 4 30 30 H 1.08004 * 119.87681 * 359.93902 * 8 7 6 31 31 H 1.07999 * 119.66678 * 180.19455 * 9 8 7 32 32 H 0.97001 * 120.00062 * 0.02562 * 13 11 10 33 33 H 1.09001 * 113.61085 * 254.52964 * 16 14 13 34 34 H 1.08999 * 113.61345 * 25.42896 * 16 14 13 35 35 H 1.09004 * 109.47364 * 37.49818 * 19 17 16 36 36 H 1.08995 * 109.47444 * 157.49500 * 19 17 16 37 37 H 1.09001 * 113.61228 * 334.56719 * 21 14 13 38 38 H 1.08994 * 113.61521 * 105.47462 * 21 14 13 39 39 H 1.07998 * 120.30316 * 179.97438 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.4601 -0.1386 2.3233 6 7 2.8026 -1.1004 3.2348 7 6 2.4955 -2.3454 2.7414 8 6 2.6344 -3.6351 3.2503 9 6 2.2161 -4.7093 2.5221 10 6 1.6536 -4.5355 1.2499 11 6 1.2138 -5.7103 0.4711 12 8 0.7263 -5.5602 -0.6325 13 7 1.3527 -6.9491 0.9836 14 6 0.9158 -8.1146 0.2110 15 1 0.1534 -7.8705 -0.5288 16 6 2.0771 -8.9515 -0.3512 17 6 1.2511 -10.1970 0.0109 18 1 0.5807 -10.5243 -0.7839 19 6 2.0872 -11.3395 0.5909 20 9 2.6714 -12.0660 -0.4522 21 6 0.5626 -9.3328 1.0805 22 6 1.5098 -3.2565 0.7203 23 6 1.9286 -2.1572 1.4652 24 1 -0.3934 0.4418 0.7650 25 1 1.7924 -0.5139 -0.8899 26 1 1.5616 2.4678 -1.2086 27 1 1.5878 2.4586 1.2241 28 1 2.5954 0.9238 2.4629 29 1 3.2025 -0.9284 4.1016 30 1 3.0641 -3.7835 4.2299 31 1 2.3252 -5.7046 2.9268 32 1 1.7413 -7.0688 1.8643 33 1 2.2280 -8.8241 -1.4232 34 1 2.9999 -8.8578 0.2212 35 1 2.8689 -10.9294 1.2303 36 1 1.4461 -11.9975 1.1775 37 1 1.0714 -9.3435 2.0444 38 1 -0.5090 -9.5134 1.1644 39 1 1.0774 -3.1179 -0.2596 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13287722.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:48 Heat of formation + Delta-G solvation = -33.707020 kcal Electronic energy + Delta-G solvation = -23947.568566 eV Core-core repulsion = 20158.119941 eV Total energy + Delta-G solvation = -3789.448625 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.121 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.48845 -42.51314 -41.11658 -39.46576 -37.96268 -37.40006 -34.65934 -33.29910 -30.99428 -30.56532 -29.21891 -26.83040 -26.50763 -25.23467 -23.52608 -23.13993 -21.49376 -21.04740 -20.60426 -19.35773 -18.40587 -17.78313 -17.50660 -17.15112 -16.92268 -16.77931 -16.26791 -16.09280 -15.87072 -15.69901 -15.53836 -15.15677 -15.03885 -14.78658 -14.66867 -14.15709 -13.77508 -13.62221 -13.57599 -13.52304 -12.88520 -12.61237 -12.52280 -12.45902 -12.12631 -12.04536 -11.78629 -11.59541 -11.30456 -10.81389 -10.79027 -10.47110 -10.01187 -9.34880 -8.85875 -4.96732 -0.06733 0.16522 1.29234 1.44981 1.54837 1.93082 1.96690 2.00170 2.18419 2.94275 3.27554 3.34014 3.48770 3.51884 3.56206 3.69631 3.72446 3.78075 3.84100 4.00078 4.05659 4.09732 4.16385 4.33852 4.40755 4.47407 4.53506 4.54501 4.56830 4.65914 4.78098 4.82850 4.90897 4.99744 5.00837 5.20769 5.24274 5.35994 5.46744 5.57794 5.58348 5.95837 6.32729 6.51743 6.55336 7.32292 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.043 4.043 3 Si 0.687 3.313 4 C -0.187 4.187 5 C 0.058 3.942 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.134 4.134 9 C -0.066 4.066 10 C -0.170 4.170 11 C 0.565 3.435 12 O -0.536 6.536 13 N -0.719 5.719 14 C 0.125 3.875 15 H 0.119 0.881 16 C -0.146 4.146 17 C -0.145 4.145 18 H 0.107 0.893 19 C 0.073 3.927 20 F -0.217 7.217 21 C -0.138 4.138 22 C 0.009 3.991 23 C -0.103 4.103 24 H 0.373 0.627 25 H 0.116 0.884 26 H -0.256 1.256 27 H -0.260 1.260 28 H 0.176 0.824 29 H 0.421 0.579 30 H 0.128 0.872 31 H 0.128 0.872 32 H 0.400 0.600 33 H 0.078 0.922 34 H 0.088 0.912 35 H 0.075 0.925 36 H 0.076 0.924 37 H 0.090 0.910 38 H 0.082 0.918 39 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.641 1.490 7.328 8.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.153 4.153 3 Si 0.588 3.412 4 C -0.194 4.194 5 C -0.068 4.068 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.155 4.155 9 C -0.086 4.086 10 C -0.174 4.174 11 C 0.354 3.646 12 O -0.414 6.414 13 N -0.371 5.371 14 C 0.020 3.980 15 H 0.137 0.863 16 C -0.185 4.185 17 C -0.164 4.164 18 H 0.125 0.875 19 C 0.019 3.981 20 F -0.198 7.198 21 C -0.176 4.176 22 C -0.011 4.011 23 C -0.107 4.107 24 H 0.220 0.780 25 H 0.134 0.866 26 H -0.180 1.180 27 H -0.185 1.185 28 H 0.193 0.807 29 H 0.259 0.741 30 H 0.146 0.854 31 H 0.145 0.855 32 H 0.235 0.765 33 H 0.097 0.903 34 H 0.106 0.894 35 H 0.093 0.907 36 H 0.095 0.905 37 H 0.108 0.892 38 H 0.101 0.899 39 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.223 2.177 6.055 7.197 hybrid contribution -0.607 -0.229 1.502 1.636 sum 2.617 1.949 7.557 8.231 Atomic orbital electron populations 1.86644 1.17906 1.79871 1.48974 1.24376 0.83522 1.10080 0.97326 0.95182 0.91407 0.74098 0.80509 1.20702 1.08988 0.91939 0.97809 1.21755 1.01076 0.94448 0.89532 1.41737 1.54673 1.04142 1.18144 1.18440 0.99781 0.86506 0.94276 1.19664 1.05736 0.88875 1.01183 1.20575 0.96656 0.98321 0.93068 1.19552 1.08228 0.93310 0.96308 1.18225 0.77741 0.82955 0.85672 1.90797 1.44304 1.86022 1.20255 1.45866 1.64397 1.05609 1.21208 1.22485 0.97664 0.82986 0.94856 0.86305 1.23549 0.97988 0.94216 1.02751 1.23014 0.99033 0.94293 1.00044 0.87500 1.21964 0.96562 0.92453 0.87167 1.92787 1.86230 1.79561 1.61190 1.23333 1.01948 0.94410 0.97912 1.20709 0.92331 0.89187 0.98845 1.18920 1.04458 0.92947 0.94387 0.77962 0.86579 1.18004 1.18497 0.80696 0.74124 0.85449 0.85462 0.76470 0.90349 0.89376 0.90711 0.90546 0.89159 0.89944 0.84319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.12 12.88 -35.23 -0.45 -1.57 16 2 C -0.04 -0.01 3.06 36.01 0.11 0.10 16 3 Si 0.69 -1.04 30.82 -169.99 -5.24 -6.28 16 4 C -0.19 -0.08 5.58 -102.69 -0.57 -0.65 16 5 C 0.06 -0.11 10.43 -16.73 -0.17 -0.28 16 6 N -0.58 1.22 6.05 -10.61 -0.06 1.16 16 7 C 0.12 0.04 7.27 -83.95 -0.61 -0.57 16 8 C -0.13 0.12 10.00 -39.85 -0.40 -0.28 16 9 C -0.07 0.04 9.46 -39.53 -0.37 -0.33 16 10 C -0.17 -0.36 5.87 -104.97 -0.62 -0.97 16 11 C 0.57 1.86 7.76 -12.41 -0.10 1.76 16 12 O -0.54 -3.91 15.93 5.30 0.08 -3.82 16 13 N -0.72 0.11 5.30 -54.02 -0.29 -0.18 16 14 C 0.13 -0.03 4.24 -67.12 -0.28 -0.32 16 15 H 0.12 0.20 7.46 -51.93 -0.39 -0.19 16 16 C -0.15 0.08 7.43 -25.92 -0.19 -0.11 16 17 C -0.14 0.23 4.10 -89.81 -0.37 -0.14 16 18 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 19 C 0.07 -0.11 7.35 37.15 0.27 0.17 16 20 F -0.22 -0.53 17.36 2.25 0.04 -0.49 16 21 C -0.14 0.37 7.39 -25.92 -0.19 0.17 16 22 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 23 C -0.10 -0.22 6.34 -105.16 -0.67 -0.88 16 24 H 0.37 -0.39 8.70 45.56 0.40 0.01 16 25 H 0.12 0.05 7.96 -51.93 -0.41 -0.37 16 26 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 27 H -0.26 0.12 7.00 56.52 0.40 0.52 16 28 H 0.18 -0.79 6.28 -52.48 -0.33 -1.12 16 29 H 0.42 -2.15 8.96 -40.82 -0.37 -2.51 16 30 H 0.13 -0.43 8.06 -52.48 -0.42 -0.86 16 31 H 0.13 -0.48 6.36 -52.49 -0.33 -0.81 16 32 H 0.40 -1.22 6.73 -40.82 -0.27 -1.49 16 33 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.09 -0.11 7.96 -51.93 -0.41 -0.52 16 35 H 0.07 -0.21 7.94 -51.93 -0.41 -0.63 16 36 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 37 H 0.09 -0.38 8.08 -51.93 -0.42 -0.80 16 38 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 39 H 0.14 0.61 7.64 -52.49 -0.40 0.21 16 LS Contribution 333.08 15.07 5.02 5.02 Total: 0.00 -9.66 333.08 -10.11 -19.77 By element: Atomic # 1 Polarization: -6.25 SS G_CDS: -4.67 Total: -10.92 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -4.54 Total: -2.68 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -0.35 Total: 0.98 kcal Atomic # 8 Polarization: -5.03 SS G_CDS: -0.37 Total: -5.40 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.24 Total: -6.28 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -9.66 -10.11 -19.77 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13287722.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.937 kcal (2) G-P(sol) polarization free energy of solvation -9.658 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.596 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.111 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.770 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.707 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds