Wall clock time and date at job start Tue Mar 9 2021 13:09:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.46674 * 2 1 4 4 C 1.50698 * 109.47381 * 119.99750 * 2 1 3 5 5 C 1.38589 * 120.32021 * 65.02540 * 4 2 1 6 6 C 1.38634 * 118.48496 * 179.72453 * 5 4 2 7 7 C 1.39268 * 119.05797 * 0.51938 * 6 5 4 8 8 C 1.48176 * 119.71949 * 179.75077 * 7 6 5 9 9 O 1.21517 * 119.99806 * 359.72261 * 8 7 6 10 10 N 1.34769 * 120.00059 * 179.72305 * 8 7 6 11 11 C 1.46497 * 120.00274 * 179.97438 * 10 8 7 12 12 H 1.09002 * 112.90477 * 336.24972 * 11 10 8 13 13 C 1.53779 * 113.61581 * 107.50145 * 11 10 8 14 14 C 1.53779 * 87.08402 * 139.98450 * 13 11 10 15 15 H 1.08998 * 113.69354 * 89.12517 * 14 13 11 16 16 C 1.53000 * 113.61731 * 220.02348 * 14 13 11 17 17 F 1.39901 * 109.46800 * 277.49417 * 16 14 13 18 18 C 1.53784 * 113.61569 * 204.99925 * 11 10 8 19 19 N 1.32738 * 120.56039 * 359.46832 * 7 6 5 20 20 C 1.31503 * 121.64341 * 0.26059 * 19 7 6 21 21 H 0.96692 * 114.00532 * 60.00125 * 1 2 3 22 22 H 1.08997 * 109.47140 * 240.00647 * 2 1 3 23 23 H 1.48501 * 110.00107 * 60.00315 * 3 2 1 24 24 H 1.48501 * 110.00001 * 181.32152 * 3 2 1 25 25 H 1.07997 * 120.75838 * 359.97310 * 5 4 2 26 26 H 1.07994 * 120.47015 * 180.26526 * 6 5 4 27 27 H 0.97009 * 120.00192 * 359.97438 * 10 8 7 28 28 H 1.09006 * 113.61307 * 25.43652 * 13 11 10 29 29 H 1.09007 * 113.61642 * 254.53409 * 13 11 10 30 30 H 1.09005 * 109.47442 * 37.48787 * 16 14 13 31 31 H 1.08994 * 109.47401 * 157.49461 * 16 14 13 32 32 H 1.09004 * 113.61451 * 105.47149 * 18 11 10 33 33 H 1.08994 * 113.61477 * 334.56451 * 18 11 10 34 34 H 1.07998 * 119.55457 * 180.02562 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.6884 -2.0635 1.4054 6 6 2.1730 -2.6799 2.5487 7 6 2.8738 -1.9197 3.4817 8 6 3.3934 -2.5624 4.7115 9 8 3.2031 -3.7469 4.9050 10 7 4.0772 -1.8333 5.6156 11 6 4.5905 -2.4686 6.8317 12 1 4.0411 -3.3699 7.1038 13 6 6.1171 -2.6537 6.8328 14 6 6.0861 -2.2511 8.3166 15 1 5.9459 -3.0920 8.9958 16 6 7.2448 -1.3410 8.7291 17 9 8.3771 -2.1188 8.9940 18 6 4.7872 -1.4902 8.0018 19 7 3.0849 -0.6255 3.2760 20 6 2.6413 -0.0169 2.1980 21 1 -0.3934 0.4416 -0.7650 22 1 1.7923 -0.5137 -0.8900 23 1 1.5614 2.4679 1.2085 24 1 3.5345 1.7704 -0.0322 25 1 1.1377 -2.6259 0.6659 26 1 2.0059 -3.7337 2.7154 27 1 4.2294 -0.8878 5.4610 28 1 6.6437 -1.9412 6.1979 29 1 6.4321 -3.6839 6.6664 30 1 7.4643 -0.6433 7.9209 31 1 6.9686 -0.7845 9.6246 32 1 4.0286 -1.5811 8.7793 33 1 4.9504 -0.4597 7.6866 34 1 2.8328 1.0376 2.0647 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_13287726.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:50 Heat of formation + Delta-G solvation = -54.045525 kcal Electronic energy + Delta-G solvation = -19515.971665 eV Core-core repulsion = 16137.630996 eV Total energy + Delta-G solvation = -3378.340669 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.106 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -48.57655 -42.05322 -40.87845 -39.38570 -37.79520 -35.06302 -33.82835 -33.15785 -29.62155 -27.80765 -26.80700 -25.21035 -24.48971 -23.03632 -21.86101 -20.99032 -19.26841 -18.61864 -18.29829 -17.52090 -16.99986 -16.83779 -16.80425 -16.50472 -16.41665 -15.81471 -15.72899 -15.30112 -15.09143 -14.72818 -14.41765 -14.07400 -13.96669 -13.64405 -13.53295 -12.95884 -12.60597 -12.52477 -12.13746 -12.08388 -11.61586 -11.57064 -11.30436 -11.17973 -10.91073 -10.59639 -10.28238 -10.13872 -4.95536 -0.73727 -0.08892 1.24570 1.38572 1.66090 1.84655 1.94019 2.48909 2.75891 3.23425 3.29045 3.35260 3.43105 3.54965 3.61853 3.68593 3.72613 3.83913 4.04482 4.11460 4.17356 4.22327 4.29512 4.46752 4.53938 4.62119 4.69578 4.72253 4.78362 4.86485 4.91579 4.97470 5.15703 5.22916 5.42444 6.12760 6.44447 6.87404 6.91252 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.076 4.076 3 Si 0.772 3.228 4 C -0.109 4.109 5 C -0.049 4.049 6 C -0.112 4.112 7 C 0.058 3.942 8 C 0.570 3.430 9 O -0.564 6.564 10 N -0.689 5.689 11 C 0.111 3.889 12 H 0.104 0.896 13 C -0.147 4.147 14 C -0.137 4.137 15 H 0.104 0.896 16 C 0.067 3.933 17 F -0.239 7.239 18 C -0.120 4.120 19 N -0.461 5.461 20 C 0.082 3.918 21 H 0.409 0.591 22 H 0.108 0.892 23 H -0.290 1.290 24 H -0.283 1.283 25 H 0.173 0.827 26 H 0.157 0.843 27 H 0.419 0.581 28 H 0.094 0.906 29 H 0.064 0.936 30 H 0.089 0.911 31 H 0.096 0.904 32 H 0.091 0.909 33 H 0.109 0.891 34 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.243 5.727 -5.384 8.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.187 4.187 3 Si 0.678 3.322 4 C -0.111 4.111 5 C -0.075 4.075 6 C -0.132 4.132 7 C -0.079 4.079 8 C 0.356 3.644 9 O -0.442 6.442 10 N -0.339 5.339 11 C 0.007 3.993 12 H 0.122 0.878 13 C -0.186 4.186 14 C -0.157 4.157 15 H 0.123 0.877 16 C 0.012 3.988 17 F -0.220 7.220 18 C -0.158 4.158 19 N -0.172 5.172 20 C -0.077 4.077 21 H 0.261 0.739 22 H 0.126 0.874 23 H -0.218 1.218 24 H -0.210 1.210 25 H 0.191 0.809 26 H 0.175 0.825 27 H 0.257 0.743 28 H 0.112 0.888 29 H 0.083 0.917 30 H 0.108 0.892 31 H 0.114 0.886 32 H 0.110 0.890 33 H 0.127 0.873 34 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -1.305 5.601 -3.597 6.783 hybrid contribution -0.185 -0.802 -0.361 0.899 sum -1.489 4.798 -3.958 6.396 Atomic orbital electron populations 1.86433 1.16530 1.82551 1.51761 1.24757 0.86446 1.11259 0.96224 0.93959 0.77725 0.75276 0.85284 1.21038 0.97675 0.95449 0.96961 1.21844 0.95067 0.93784 0.96771 1.22387 0.95017 1.02558 0.93272 1.21182 0.99956 0.90580 0.96203 1.18066 0.77842 0.85700 0.82806 1.90784 1.59726 1.16132 1.77596 1.45815 1.53961 1.13982 1.20182 1.22682 0.94350 0.98154 0.84145 0.87826 1.23558 0.95811 1.02656 0.96546 1.22936 0.95588 1.00155 0.96985 0.87747 1.22212 0.80804 0.92149 1.03633 1.92740 1.55105 1.78316 1.95887 1.23281 0.96582 0.99260 0.96725 1.67425 1.18658 1.09528 1.21594 1.22716 0.95738 0.99907 0.89352 0.73930 0.87385 1.21782 1.21028 0.80944 0.82549 0.74300 0.88777 0.91737 0.89229 0.88615 0.89001 0.87282 0.82150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.67 12.82 -148.98 -1.91 0.76 16 2 C -0.08 0.40 2.81 71.24 0.20 0.60 16 3 Si 0.77 -4.76 29.87 68.60 2.05 -2.71 16 4 C -0.11 -0.15 5.40 -19.69 -0.11 -0.26 16 5 C -0.05 -0.05 9.83 22.45 0.22 0.17 16 6 C -0.11 -0.53 9.63 22.61 0.22 -0.32 16 7 C 0.06 0.44 6.75 41.90 0.28 0.72 16 8 C 0.57 5.25 7.81 86.89 0.68 5.92 16 9 O -0.56 -8.54 15.92 -3.77 -0.06 -8.60 16 10 N -0.69 -2.36 5.34 -442.60 -2.37 -4.72 16 11 C 0.11 0.15 4.24 45.52 0.19 0.34 16 12 H 0.10 0.51 7.47 -2.39 -0.02 0.49 16 13 C -0.15 -0.07 7.43 31.12 0.23 0.16 16 14 C -0.14 0.35 4.10 -10.27 -0.04 0.31 16 15 H 0.10 -0.18 8.14 -2.39 -0.02 -0.20 16 16 C 0.07 -0.18 7.35 71.98 0.53 0.35 16 17 F -0.24 -1.35 17.36 44.97 0.78 -0.57 16 18 C -0.12 0.55 7.39 31.12 0.23 0.78 16 19 N -0.46 -2.98 9.54 -184.91 -1.76 -4.75 16 20 C 0.08 0.34 9.84 84.83 0.83 1.18 16 21 H 0.41 -6.20 8.74 -74.06 -0.65 -6.85 16 22 H 0.11 -1.09 7.96 -2.39 -0.02 -1.11 16 23 H -0.29 -0.34 7.05 99.48 0.70 0.36 16 24 H -0.28 0.20 7.11 99.48 0.71 0.90 16 25 H 0.17 -0.72 8.06 -2.91 -0.02 -0.74 16 26 H 0.16 0.58 7.64 -2.91 -0.02 0.56 16 27 H 0.42 0.09 8.06 -92.70 -0.75 -0.66 16 28 H 0.09 -0.06 7.96 -2.38 -0.02 -0.08 16 29 H 0.06 0.22 8.14 -2.38 -0.02 0.20 16 30 H 0.09 -0.49 7.94 -2.38 -0.02 -0.51 16 31 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 32 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 33 H 0.11 -0.84 8.08 -2.39 -0.02 -0.86 16 34 H 0.16 0.30 4.88 -2.91 -0.01 0.28 16 Total: 0.00 -19.95 296.96 -0.02 -19.97 By element: Atomic # 1 Polarization: -9.13 SS G_CDS: -0.22 Total: -9.35 kcal Atomic # 6 Polarization: 6.49 SS G_CDS: 3.47 Total: 9.96 kcal Atomic # 7 Polarization: -5.34 SS G_CDS: -4.13 Total: -9.47 kcal Atomic # 8 Polarization: -5.86 SS G_CDS: -1.97 Total: -7.83 kcal Atomic # 9 Polarization: -1.35 SS G_CDS: 0.78 Total: -0.57 kcal Atomic # 14 Polarization: -4.76 SS G_CDS: 2.05 Total: -2.71 kcal Total: -19.95 -0.02 -19.97 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13287726.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.079 kcal (2) G-P(sol) polarization free energy of solvation -19.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.017 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.967 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.046 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds