Wall clock time and date at job start Tue Mar 9 2021 13:09:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34659 * 124.85015 * 2 1 4 4 C 1.36773 * 108.39365 * 180.24474 * 3 2 1 5 5 C 1.47268 * 126.94067 * 179.79251 * 4 3 2 6 6 O 1.21620 * 119.99941 * 179.97438 * 5 4 3 7 7 N 1.34777 * 120.00026 * 359.97098 * 5 4 3 8 8 C 1.46493 * 119.99917 * 180.02562 * 7 5 4 9 9 H 1.08995 * 112.85369 * 23.80683 * 8 7 5 10 10 C 1.53787 * 113.61512 * 155.00422 * 8 7 5 11 11 C 1.53772 * 87.08237 * 139.98036 * 10 8 7 12 12 H 1.09003 * 113.61428 * 89.20033 * 11 10 8 13 13 C 1.53004 * 113.61774 * 220.01777 * 11 10 8 14 14 F 1.39893 * 109.46923 * 300.00408 * 13 11 10 15 15 C 1.53783 * 87.08569 * 334.56703 * 11 10 8 16 16 C 1.46689 * 106.11696 * 359.76973 * 4 3 2 17 17 C 1.34481 * 106.32959 * 0.02562 * 16 4 3 18 18 C 1.50707 * 125.56573 * 179.97438 * 17 16 4 19 19 O 1.42903 * 109.46442 * 210.02325 * 18 17 16 20 20 Si 1.86293 * 109.47256 * 330.01891 * 18 17 16 21 21 H 1.08998 * 109.47169 * 270.15737 * 1 2 3 22 22 H 1.09003 * 109.46613 * 30.15996 * 1 2 3 23 23 H 1.09002 * 109.46664 * 150.15416 * 1 2 3 24 24 H 1.07992 * 125.80174 * 359.97438 * 3 2 1 25 25 H 0.97000 * 119.99752 * 0.02562 * 7 5 4 26 26 H 1.08999 * 113.60999 * 254.53175 * 10 8 7 27 27 H 1.08996 * 113.60976 * 25.43161 * 10 8 7 28 28 H 1.09008 * 109.46879 * 60.00100 * 13 11 10 29 29 H 1.08996 * 109.47324 * 180.02562 * 13 11 10 30 30 H 1.08993 * 113.61572 * 270.88761 * 15 11 10 31 31 H 1.09001 * 113.61512 * 139.98078 * 15 11 10 32 32 H 1.07996 * 126.83114 * 180.02562 * 16 4 3 33 33 H 1.08999 * 109.47345 * 90.02395 * 18 17 16 34 34 H 0.96700 * 114.00311 * 60.00230 * 19 18 17 35 35 H 1.48506 * 109.99973 * 180.02562 * 20 18 17 36 36 H 1.48493 * 110.00375 * 301.32185 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7176 -0.0055 5 6 4.7284 1.5957 -0.0118 6 8 5.8446 1.1128 -0.0159 7 7 4.5734 2.9346 -0.0131 8 6 5.7495 3.8080 -0.0199 9 1 6.6353 3.3221 -0.4287 10 6 5.4798 5.1997 -0.6161 11 6 6.3695 5.7653 0.5033 12 1 7.4255 5.8163 0.2380 13 6 5.8439 7.0709 1.1035 14 9 5.7628 8.0447 0.1025 15 6 5.9976 4.5175 1.3218 16 6 3.5375 -0.7492 -0.0034 17 6 2.2448 -1.1197 0.0025 18 6 1.7398 -2.5397 0.0061 19 8 0.4782 -2.5981 -0.6626 20 14 2.9614 -3.6354 -0.8758 21 1 -0.3633 0.0028 1.0276 22 1 -0.3633 0.8886 -0.5163 23 1 -0.3633 -0.8914 -0.5115 24 1 1.8767 2.1240 -0.0004 25 1 3.6832 3.3197 -0.0095 26 1 5.8955 5.3349 -1.6146 27 1 4.4376 5.5108 -0.5447 28 1 4.8541 6.9030 1.5282 29 1 6.5226 7.4102 1.8859 30 1 5.0970 4.6421 1.9229 31 1 6.8315 4.1021 1.8877 32 1 4.3981 -1.4017 -0.0061 33 1 1.6221 -2.8809 1.0346 34 1 0.5079 -2.3082 -1.5846 35 1 2.4747 -5.0384 -0.8797 36 1 3.1547 -3.1615 -2.2697 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13287730.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:52 Heat of formation + Delta-G solvation = -41.333321 kcal Electronic energy + Delta-G solvation = -20271.470450 eV Core-core repulsion = 16866.369545 eV Total energy + Delta-G solvation = -3405.100905 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -48.50893 -42.50275 -40.82089 -39.01046 -38.01506 -34.55489 -33.78667 -31.49869 -29.47064 -27.66036 -26.77611 -26.38415 -24.40388 -22.66990 -21.26840 -20.81883 -20.38806 -19.02328 -17.71215 -17.38253 -16.97869 -16.95210 -16.85320 -16.69915 -15.97620 -15.80491 -15.61133 -15.43630 -15.27613 -14.86594 -14.38206 -14.11766 -13.61493 -13.58578 -13.38680 -13.35026 -13.07416 -13.00012 -12.62700 -12.33273 -11.94794 -11.83973 -11.57993 -11.35634 -10.97753 -10.72681 -9.96860 -9.57516 -9.23927 -4.94487 0.74294 1.01605 1.42576 1.63500 1.77607 2.01889 2.31589 2.66519 3.00726 3.30108 3.36410 3.49396 3.58393 3.73124 3.74442 3.79172 3.95358 4.06542 4.11494 4.14892 4.24572 4.37529 4.43669 4.53344 4.57184 4.63916 4.72643 4.77366 4.90222 4.94237 4.97404 4.99433 5.24774 5.57404 5.68587 5.92876 6.11470 6.15084 6.66101 7.46462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.426 5.426 3 C 0.050 3.950 4 C -0.228 4.228 5 C 0.592 3.408 6 O -0.541 6.541 7 N -0.723 5.723 8 C 0.127 3.873 9 H 0.119 0.881 10 C -0.138 4.138 11 C -0.145 4.145 12 H 0.105 0.895 13 C 0.073 3.927 14 F -0.217 7.217 15 C -0.143 4.143 16 C -0.129 4.129 17 C -0.022 4.022 18 C -0.049 4.049 19 O -0.532 6.532 20 Si 0.712 3.288 21 H 0.075 0.925 22 H 0.081 0.919 23 H 0.111 0.889 24 H 0.170 0.830 25 H 0.397 0.603 26 H 0.080 0.920 27 H 0.088 0.912 28 H 0.074 0.926 29 H 0.076 0.924 30 H 0.088 0.912 31 H 0.079 0.921 32 H 0.158 0.842 33 H 0.122 0.878 34 H 0.378 0.622 35 H -0.253 1.253 36 H -0.257 1.257 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.619 1.067 1.440 4.038 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.100 5.100 3 C -0.087 4.087 4 C -0.238 4.238 5 C 0.381 3.619 6 O -0.418 6.418 7 N -0.373 5.373 8 C 0.022 3.978 9 H 0.137 0.863 10 C -0.176 4.176 11 C -0.165 4.165 12 H 0.124 0.876 13 C 0.018 3.982 14 F -0.198 7.198 15 C -0.182 4.182 16 C -0.153 4.153 17 C -0.131 4.131 18 C -0.158 4.158 19 O -0.339 6.339 20 Si 0.611 3.389 21 H 0.093 0.907 22 H 0.100 0.900 23 H 0.129 0.871 24 H 0.187 0.813 25 H 0.231 0.769 26 H 0.098 0.902 27 H 0.106 0.894 28 H 0.092 0.908 29 H 0.095 0.905 30 H 0.106 0.894 31 H 0.098 0.902 32 H 0.176 0.824 33 H 0.140 0.860 34 H 0.226 0.774 35 H -0.178 1.178 36 H -0.181 1.181 Dipole moment (debyes) X Y Z Total from point charges -3.252 -0.077 1.309 3.507 hybrid contribution -1.432 1.027 -0.547 1.845 sum -4.684 0.950 0.762 4.840 Atomic orbital electron populations 1.22555 0.76377 1.05854 1.04334 1.43488 1.06991 1.04970 1.54587 1.21931 0.90163 0.91788 1.04779 1.20321 0.91474 0.94006 1.18035 1.17429 0.88068 0.81349 0.75029 1.90782 1.25810 1.75157 1.50053 1.45809 1.09251 1.05781 1.76472 1.22454 0.90197 0.88723 0.96448 0.86335 1.23342 1.00577 0.94537 0.99183 1.23007 1.01357 0.93874 0.98220 0.87637 1.21948 1.02461 0.85509 0.88310 1.92779 1.97853 1.64997 1.64151 1.23465 1.02601 0.94779 0.97346 1.21632 0.94820 0.93070 1.05817 1.20757 0.90712 0.89007 1.12653 1.24790 0.92553 0.94809 1.03676 1.86553 1.29692 1.88604 1.29079 0.94184 0.85264 0.77418 0.82066 0.90652 0.90014 0.87106 0.81331 0.76870 0.90166 0.89396 0.90781 0.90530 0.89366 0.90237 0.82445 0.85986 0.77397 1.17779 1.18057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.16 10.71 59.85 0.64 0.49 16 2 N -0.43 0.30 3.09 -119.89 -0.37 -0.07 16 3 C 0.05 -0.04 10.83 -16.84 -0.18 -0.22 16 4 C -0.23 -0.41 6.29 -103.35 -0.65 -1.06 16 5 C 0.59 1.85 7.81 -12.59 -0.10 1.75 16 6 O -0.54 -3.81 16.57 5.26 0.09 -3.72 16 7 N -0.72 0.17 5.34 -54.14 -0.29 -0.12 16 8 C 0.13 -0.04 4.24 -67.12 -0.28 -0.32 16 9 H 0.12 0.18 7.46 -51.93 -0.39 -0.21 16 10 C -0.14 0.22 7.26 -25.92 -0.19 0.03 16 11 C -0.15 0.25 4.13 -89.81 -0.37 -0.12 16 12 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 13 C 0.07 -0.11 7.40 37.16 0.28 0.16 16 14 F -0.22 -0.41 17.22 2.25 0.04 -0.37 16 15 C -0.14 0.22 7.43 -25.91 -0.19 0.03 16 16 C -0.13 -0.21 9.49 -37.50 -0.36 -0.56 16 17 C -0.02 0.00 6.14 -81.86 -0.50 -0.51 16 18 C -0.05 0.05 2.98 36.01 0.11 0.16 16 19 O -0.53 0.54 9.95 -35.23 -0.35 0.19 16 20 Si 0.71 -0.78 31.12 -169.99 -5.29 -6.07 16 21 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 22 H 0.08 -0.39 8.13 -51.93 -0.42 -0.82 16 23 H 0.11 -0.35 4.92 -51.93 -0.26 -0.61 16 24 H 0.17 -0.73 7.45 -52.49 -0.39 -1.12 16 25 H 0.40 -1.20 7.67 -40.82 -0.31 -1.51 16 26 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 27 H 0.09 -0.21 8.08 -51.93 -0.42 -0.63 16 28 H 0.07 -0.22 7.94 -51.92 -0.41 -0.63 16 29 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 30 H 0.09 -0.21 7.96 -51.93 -0.41 -0.62 16 31 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.16 0.10 6.89 -52.49 -0.36 -0.26 16 33 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 34 H 0.38 -1.29 8.36 45.56 0.38 -0.91 16 35 H -0.25 -0.41 7.11 56.52 0.40 0.00 16 36 H -0.26 -0.42 7.11 56.52 0.40 -0.01 16 LS Contribution 305.76 15.07 4.61 4.61 Total: 0.00 -8.50 305.76 -8.09 -16.58 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -4.72 Total: -10.84 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -1.80 Total: -0.18 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.66 Total: -0.19 kcal Atomic # 8 Polarization: -3.27 SS G_CDS: -0.26 Total: -3.53 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.29 Total: -6.07 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -8.50 -8.09 -16.58 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13287730.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.750 kcal (2) G-P(sol) polarization free energy of solvation -8.495 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.583 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.333 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds