Wall clock time and date at job start Tue Mar 9 2021 13:09:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38971 * 119.96057 * 2 1 4 4 O 1.35716 * 119.90887 * 359.95086 * 3 2 1 5 5 C 1.39017 * 120.17838 * 179.97438 * 3 2 1 6 6 C 1.50704 * 119.95180 * 179.97438 * 5 3 2 7 7 O 1.42890 * 109.47391 * 74.99643 * 6 5 3 8 8 Si 1.86301 * 109.46717 * 194.99658 * 6 5 3 9 9 C 1.37676 * 120.09001 * 359.97438 * 5 3 2 10 10 C 1.39755 * 119.90915 * 0.02562 * 9 5 3 11 11 C 1.47605 * 120.08176 * 179.97438 * 10 9 5 12 12 O 1.21580 * 120.00258 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99348 * 180.02562 * 11 10 9 14 14 C 1.46502 * 119.99606 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.85305 * 334.66779 * 14 13 11 16 16 C 1.53784 * 113.61142 * 105.86450 * 14 13 11 17 17 C 1.53956 * 87.01839 * 139.95257 * 16 14 13 18 18 H 1.08997 * 113.61651 * 89.20393 * 17 16 14 19 19 C 1.53006 * 113.66653 * 220.06435 * 17 16 14 20 20 F 1.39891 * 109.47274 * 162.55664 * 19 17 16 21 21 C 1.53772 * 87.11213 * 334.63371 * 17 16 14 22 22 C 1.37731 * 119.95310 * 179.97438 * 2 1 3 23 23 H 1.08999 * 109.46947 * 270.02450 * 1 2 3 24 24 H 1.09001 * 109.47271 * 30.02378 * 1 2 3 25 25 H 1.09000 * 109.47504 * 150.02951 * 1 2 3 26 26 H 0.96694 * 113.99878 * 90.00246 * 4 3 2 27 27 H 1.09006 * 109.46857 * 314.99208 * 6 5 3 28 28 H 0.96697 * 114.00286 * 59.99760 * 7 6 5 29 29 H 1.48500 * 109.99940 * 179.97438 * 8 6 5 30 30 H 1.48496 * 109.99988 * 301.31518 * 8 6 5 31 31 H 1.08000 * 120.04162 * 180.28108 * 9 5 3 32 32 H 0.97002 * 120.00772 * 0.02562 * 13 11 10 33 33 H 1.09001 * 113.61007 * 254.52820 * 16 14 13 34 34 H 1.09001 * 113.61697 * 25.43015 * 16 14 13 35 35 H 1.09002 * 109.47071 * 282.56699 * 19 17 16 36 36 H 1.09004 * 109.46687 * 42.55437 * 19 17 16 37 37 H 1.08998 * 113.61986 * 270.81456 * 21 17 16 38 38 H 1.09001 * 113.69160 * 139.92359 * 21 17 16 39 39 H 1.07998 * 120.04558 * 0.04733 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2040 0.0000 4 8 1.5197 2.3778 -0.0010 5 6 3.5912 1.2093 0.0005 6 6 4.3386 2.5179 0.0000 7 8 4.2715 3.1054 1.3008 8 14 6.1200 2.2152 -0.4537 9 6 4.2859 0.0207 0.0016 10 6 3.5917 -1.1923 0.0016 11 6 4.3328 -2.4688 0.0022 12 8 5.5486 -2.4660 0.0022 13 7 3.6615 -3.6375 0.0017 14 6 4.3970 -4.9046 0.0017 15 1 5.3948 -4.8148 -0.4277 16 6 4.3725 -5.6310 1.3569 17 6 4.2039 -6.9387 0.5621 18 1 5.1487 -7.4071 0.2866 19 6 3.2171 -7.9205 1.1971 20 9 2.8264 -8.8694 0.2465 21 6 3.5886 -6.0861 -0.5600 22 6 2.1946 -1.1933 0.0005 23 1 -0.3633 0.0004 1.0277 24 1 -0.3634 0.8898 -0.5142 25 1 -0.3634 -0.8902 -0.5134 26 1 1.3217 2.7183 0.8820 27 1 3.8881 3.1933 -0.7275 28 1 4.6549 2.5582 1.9998 29 1 6.8679 3.4981 -0.4584 30 1 6.7367 1.2709 0.5123 31 1 5.3659 0.0257 0.0066 32 1 2.6915 -3.6398 0.0005 33 1 5.3141 -5.5689 1.9025 34 1 3.5084 -5.3792 1.9718 35 1 3.6952 -8.4236 2.0377 36 1 2.3404 -7.3773 1.5500 37 1 2.5098 -5.9590 -0.4703 38 1 3.8971 -6.3900 -1.5603 39 1 1.6546 -2.1286 0.0002 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_13287732.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:54 Heat of formation + Delta-G solvation = -112.982811 kcal Electronic energy + Delta-G solvation = -23688.172758 eV Core-core repulsion = 19898.482476 eV Total energy + Delta-G solvation = -3789.690282 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -48.52347 -41.79850 -40.82120 -39.37408 -37.98137 -37.49256 -34.92058 -33.97890 -31.85126 -29.33499 -27.98854 -26.91561 -26.71454 -25.27716 -23.15487 -22.05086 -21.59429 -20.69159 -19.59787 -18.74249 -18.16971 -17.76232 -17.08479 -16.85397 -16.70895 -16.52789 -16.21740 -16.10509 -15.91349 -15.64586 -15.61951 -14.99539 -14.64826 -14.37305 -14.09848 -13.88204 -13.49783 -13.41327 -13.32781 -13.06120 -12.92479 -12.75669 -12.57607 -12.48317 -11.92773 -11.79656 -11.64908 -11.51375 -11.36136 -11.04442 -10.65185 -10.20718 -9.98149 -9.65359 -5.01871 -0.41009 0.06239 1.19638 1.49971 1.57783 1.82744 2.02863 2.53379 3.13269 3.32545 3.34905 3.40905 3.46911 3.54711 3.66385 3.69824 3.78182 4.01285 4.10390 4.17173 4.18857 4.26608 4.39210 4.48466 4.62885 4.66210 4.69163 4.73450 4.79581 4.82121 4.84603 4.98364 5.03429 5.04732 5.08494 5.20611 5.22586 5.32820 5.50466 5.59943 6.39105 6.42676 6.70498 7.09186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.119 4.119 3 C 0.157 3.843 4 O -0.496 6.496 5 C -0.152 4.152 6 C -0.061 4.061 7 O -0.539 6.539 8 Si 0.742 3.258 9 C -0.066 4.066 10 C -0.151 4.151 11 C 0.559 3.441 12 O -0.579 6.579 13 N -0.700 5.700 14 C 0.116 3.884 15 H 0.097 0.903 16 C -0.135 4.135 17 C -0.141 4.141 18 H 0.100 0.900 19 C 0.067 3.933 20 F -0.237 7.237 21 C -0.130 4.130 22 C -0.053 4.053 23 H 0.084 0.916 24 H 0.070 0.930 25 H 0.086 0.914 26 H 0.412 0.588 27 H 0.126 0.874 28 H 0.385 0.615 29 H -0.291 1.291 30 H -0.289 1.289 31 H 0.131 0.869 32 H 0.416 0.584 33 H 0.070 0.930 34 H 0.105 0.895 35 H 0.086 0.914 36 H 0.094 0.906 37 H 0.107 0.893 38 H 0.076 0.924 39 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.100 -2.131 1.483 6.629 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.120 4.120 3 C 0.111 3.889 4 O -0.310 6.310 5 C -0.153 4.153 6 C -0.171 4.171 7 O -0.347 6.347 8 Si 0.649 3.351 9 C -0.085 4.085 10 C -0.154 4.154 11 C 0.348 3.652 12 O -0.460 6.460 13 N -0.351 5.351 14 C 0.011 3.989 15 H 0.115 0.885 16 C -0.174 4.174 17 C -0.161 4.161 18 H 0.118 0.882 19 C 0.013 3.987 20 F -0.218 7.218 21 C -0.168 4.168 22 C -0.072 4.072 23 H 0.103 0.897 24 H 0.089 0.911 25 H 0.105 0.895 26 H 0.272 0.728 27 H 0.144 0.856 28 H 0.235 0.765 29 H -0.218 1.218 30 H -0.216 1.216 31 H 0.149 0.851 32 H 0.255 0.745 33 H 0.089 0.911 34 H 0.123 0.877 35 H 0.105 0.895 36 H 0.113 0.887 37 H 0.125 0.875 38 H 0.095 0.905 39 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -4.700 -1.680 0.774 5.051 hybrid contribution -0.124 0.056 1.582 1.588 sum -4.823 -1.623 2.356 5.608 Atomic orbital electron populations 1.20772 0.88215 1.04252 1.03631 1.20450 0.98343 0.91695 1.01495 1.18453 0.88654 0.85954 0.95800 1.84630 1.75450 1.35655 1.35243 1.20487 0.94172 0.95335 1.05269 1.24824 1.09950 0.93976 0.88349 1.86574 1.82936 1.48353 1.16825 0.93928 0.73406 0.77617 0.90196 1.21115 1.00397 0.91030 0.95929 1.19803 0.94393 0.92552 1.08662 1.18433 0.86796 0.84685 0.75299 1.90788 1.15350 1.88147 1.51744 1.45787 1.10896 1.04530 1.73916 1.22546 0.97145 0.81278 0.97956 0.88521 1.23446 1.03755 0.93561 0.96616 1.22963 1.00250 0.94841 0.98007 0.88194 1.22152 0.99134 0.88188 0.89250 1.92741 1.92791 1.67863 1.68397 1.23345 1.01092 0.93279 0.99071 1.21370 0.91565 0.99086 0.95144 0.89749 0.91097 0.89542 0.72797 0.85579 0.76540 1.21791 1.21590 0.85124 0.74525 0.91115 0.87671 0.89549 0.88738 0.87503 0.90509 0.81890 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.82 9.78 71.23 0.70 1.52 16 2 C -0.12 0.40 5.89 -19.81 -0.12 0.28 16 3 C 0.16 -0.05 6.66 22.63 0.15 0.10 16 4 O -0.50 0.62 11.84 -90.37 -1.07 -0.45 16 5 C -0.15 -0.18 5.27 -19.81 -0.10 -0.29 16 6 C -0.06 -0.07 2.37 71.24 0.17 0.10 16 7 O -0.54 -0.98 12.88 -148.98 -1.92 -2.90 16 8 Si 0.74 1.72 30.25 68.60 2.07 3.79 16 9 C -0.07 -0.21 8.19 22.50 0.18 -0.03 16 10 C -0.15 -0.19 5.87 -20.08 -0.12 -0.31 16 11 C 0.56 2.32 7.76 86.72 0.67 2.99 16 12 O -0.58 -7.57 15.96 -3.97 -0.06 -7.63 16 13 N -0.70 2.17 5.31 -443.12 -2.35 -0.19 16 14 C 0.12 -0.28 4.21 45.52 0.19 -0.08 16 15 H 0.10 0.26 7.50 -2.39 -0.02 0.24 16 16 C -0.14 0.68 7.45 31.18 0.23 0.92 16 17 C -0.14 0.73 4.11 -10.21 -0.04 0.69 16 18 H 0.10 -0.40 8.14 -2.39 -0.02 -0.42 16 19 C 0.07 -0.36 7.33 71.98 0.53 0.17 16 20 F -0.24 -0.55 17.30 44.97 0.78 0.23 16 21 C -0.13 0.73 7.34 31.12 0.23 0.96 16 22 C -0.05 0.24 9.18 22.51 0.21 0.45 16 23 H 0.08 -0.78 8.14 -2.39 -0.02 -0.80 16 24 H 0.07 -0.36 7.52 -2.39 -0.02 -0.38 16 25 H 0.09 -0.86 8.08 -2.39 -0.02 -0.88 16 26 H 0.41 -3.19 9.06 -74.06 -0.67 -3.86 16 27 H 0.13 0.09 7.82 -2.38 -0.02 0.07 16 28 H 0.39 -1.28 8.70 -74.06 -0.64 -1.92 16 29 H -0.29 -2.46 7.11 99.48 0.71 -1.75 16 30 H -0.29 -2.23 6.68 99.48 0.66 -1.57 16 31 H 0.13 0.74 4.43 -2.91 -0.01 0.73 16 32 H 0.42 -4.09 6.73 -92.71 -0.62 -4.72 16 33 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 34 H 0.10 -0.85 8.04 -2.39 -0.02 -0.87 16 35 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 36 H 0.09 -0.87 8.06 -2.38 -0.02 -0.89 16 37 H 0.11 -0.96 8.07 -2.39 -0.02 -0.98 16 38 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 39 H 0.16 -1.92 6.39 -2.91 -0.02 -1.93 16 Total: 0.00 -20.29 329.88 -0.50 -20.79 By element: Atomic # 1 Polarization: -20.29 SS G_CDS: -0.83 Total: -21.11 kcal Atomic # 6 Polarization: 4.59 SS G_CDS: 2.88 Total: 7.47 kcal Atomic # 7 Polarization: 2.17 SS G_CDS: -2.35 Total: -0.19 kcal Atomic # 8 Polarization: -7.93 SS G_CDS: -3.05 Total: -10.98 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.78 Total: 0.23 kcal Atomic # 14 Polarization: 1.72 SS G_CDS: 2.07 Total: 3.79 kcal Total: -20.29 -0.50 -20.79 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13287732.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.192 kcal (2) G-P(sol) polarization free energy of solvation -20.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.791 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.983 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds