Wall clock time and date at job start Tue Mar 9 2021 13:10:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47076 * 2 1 4 4 C 1.50704 * 109.47296 * 240.00421 * 2 1 3 5 5 C 1.33744 * 125.11383 * 300.00116 * 4 2 1 6 6 C 1.37804 * 115.07932 * 179.97438 * 5 4 2 7 7 C 1.34986 * 114.69861 * 0.02562 * 6 5 4 8 8 C 1.47555 * 125.27478 * 179.97438 * 7 6 5 9 9 C 1.39824 * 119.99767 * 359.74833 * 8 7 6 10 10 C 1.36564 * 120.00101 * 179.76536 * 9 8 7 11 11 C 1.39840 * 119.99866 * 0.50912 * 10 9 8 12 12 C 1.47555 * 120.00338 * 179.76539 * 11 10 9 13 13 O 1.21595 * 119.99972 * 179.97438 * 12 11 10 14 14 N 1.34773 * 120.00133 * 359.97438 * 12 11 10 15 15 C 1.46500 * 120.00465 * 179.97438 * 14 12 11 16 16 H 1.08997 * 112.84549 * 23.80370 * 15 14 12 17 17 C 1.53777 * 113.61629 * 154.99664 * 15 14 12 18 18 C 1.53782 * 87.08156 * 139.98332 * 17 15 14 19 19 H 1.08995 * 113.61525 * 89.19908 * 18 17 15 20 20 C 1.52995 * 113.61852 * 220.02374 * 18 17 15 21 21 F 1.39907 * 109.46922 * 299.99843 * 20 18 17 22 22 C 1.53779 * 113.61422 * 252.49750 * 15 14 12 23 23 C 1.39830 * 119.99308 * 359.74174 * 11 10 9 24 24 C 1.36565 * 120.00220 * 0.02562 * 23 11 10 25 25 S 1.75853 * 125.12121 * 119.97076 * 4 2 1 26 26 H 0.96700 * 113.99904 * 60.00030 * 1 2 3 27 27 H 1.08999 * 109.47107 * 120.00421 * 2 1 3 28 28 H 1.48497 * 110.00017 * 298.68478 * 3 2 1 29 29 H 1.48498 * 109.99912 * 60.00275 * 3 2 1 30 30 H 1.07997 * 122.46347 * 359.70306 * 5 4 2 31 31 H 1.07998 * 122.65025 * 179.97438 * 6 5 4 32 32 H 1.07993 * 120.00158 * 359.97438 * 9 8 7 33 33 H 1.07995 * 120.00726 * 180.25621 * 10 9 8 34 34 H 0.97008 * 119.99816 * 0.02562 * 14 12 11 35 35 H 1.08998 * 113.61471 * 254.53033 * 17 15 14 36 36 H 1.09000 * 113.61531 * 25.35534 * 17 15 14 37 37 H 1.08995 * 109.47771 * 59.99424 * 20 18 17 38 38 H 1.09002 * 109.47621 * 180.02562 * 20 18 17 39 39 H 1.08997 * 113.61534 * 334.56701 * 22 15 14 40 40 H 1.08998 * 113.61218 * 105.46894 * 22 15 14 41 41 H 1.08004 * 119.99862 * 180.02562 * 23 11 10 42 42 H 1.08004 * 120.00057 * 180.02562 * 24 23 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.6721 -1.9847 -1.5429 6 6 2.2372 -2.4240 -2.7205 7 6 2.9668 -1.4968 -3.3764 8 6 3.6721 -1.7149 -4.6539 9 6 3.6183 -2.9652 -5.2776 10 6 4.2671 -3.1658 -6.4624 11 6 4.9940 -2.1238 -7.0466 12 6 5.6993 -2.3419 -8.3242 13 8 6.3310 -1.4357 -8.8324 14 7 5.6433 -3.5456 -8.9279 15 6 6.3431 -3.7620 -10.1967 16 1 7.1739 -3.0722 -10.3448 17 6 6.7103 -5.2329 -10.4545 18 6 6.3159 -4.9924 -11.9213 19 1 7.1391 -4.6401 -12.5427 20 6 5.5541 -6.1605 -12.5506 21 9 6.3511 -7.3098 -12.5158 22 6 5.4026 -3.8661 -11.4089 23 6 5.0520 -0.8750 -6.4202 24 6 4.3993 -0.6732 -5.2378 25 16 2.9461 0.0117 -2.4721 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8899 28 1 1.5878 2.4586 -1.2242 29 1 1.5615 2.4678 1.2085 30 1 1.0680 -2.6238 -0.9161 31 1 2.1073 -3.4308 -3.0891 32 1 3.0609 -3.7714 -4.8240 33 1 4.2221 -4.1303 -6.9463 34 1 5.1391 -4.2684 -8.5227 35 1 7.7698 -5.4490 -10.3171 36 1 6.0632 -5.9416 -9.9376 37 1 4.6354 -6.3384 -11.9918 38 1 5.3096 -5.9196 -13.5852 39 1 4.3972 -4.2011 -11.1540 40 1 5.4065 -2.9788 -12.0419 41 1 5.6131 -0.0700 -6.8716 42 1 4.4438 0.2915 -4.7542 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13308390.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:04 Heat of formation + Delta-G solvation = -34.700344 kcal Electronic energy + Delta-G solvation = -26074.417416 eV Core-core repulsion = 22027.513974 eV Total energy + Delta-G solvation = -4046.903442 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.098 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -48.54678 -41.53977 -40.40229 -39.45490 -38.85150 -37.50362 -34.91682 -33.45540 -32.31176 -30.63563 -29.45906 -27.28606 -26.86379 -25.05042 -24.15478 -23.72975 -23.02023 -21.62497 -20.93456 -20.33942 -19.22869 -18.60286 -17.89568 -17.57305 -17.07454 -16.79820 -16.72192 -16.40797 -16.30519 -16.22516 -16.10883 -15.76504 -15.45749 -15.38590 -14.95279 -14.54615 -14.50614 -14.25416 -13.83412 -13.68783 -13.66685 -13.57214 -13.24370 -13.19319 -13.04322 -12.70421 -12.58152 -12.37112 -12.15912 -11.90684 -11.66935 -11.56808 -11.44609 -10.93939 -10.90019 -10.67565 -10.25531 -10.12696 -9.60302 -9.07807 -5.13860 -0.93021 0.21346 0.28182 0.33661 0.70501 1.14826 1.49958 1.53104 1.83679 1.96534 2.04282 2.79651 3.20146 3.21562 3.26705 3.36555 3.48321 3.57513 3.59973 3.65256 3.70770 3.75524 3.90912 4.01252 4.10616 4.11498 4.23507 4.31085 4.42482 4.46393 4.49114 4.52693 4.57268 4.64368 4.70839 4.82457 4.85003 4.90350 4.93133 5.03759 5.11123 5.17465 5.22053 5.25066 5.40607 5.43741 5.67146 6.23508 6.39772 7.14217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.033 4.033 3 Si 0.649 3.351 4 C -0.217 4.217 5 C -0.104 4.104 6 C -0.119 4.119 7 C -0.148 4.148 8 C 0.013 3.987 9 C -0.110 4.110 10 C -0.078 4.078 11 C -0.137 4.137 12 C 0.561 3.439 13 O -0.533 6.533 14 N -0.717 5.717 15 C 0.124 3.876 16 H 0.120 0.880 17 C -0.138 4.138 18 C -0.145 4.145 19 H 0.106 0.894 20 C 0.073 3.927 21 F -0.216 7.216 22 C -0.143 4.143 23 C -0.048 4.048 24 C -0.120 4.120 25 S 0.134 5.866 26 H 0.378 0.622 27 H 0.128 0.872 28 H -0.240 1.240 29 H -0.234 1.234 30 H 0.146 0.854 31 H 0.145 0.855 32 H 0.134 0.866 33 H 0.130 0.870 34 H 0.401 0.599 35 H 0.081 0.919 36 H 0.089 0.911 37 H 0.075 0.925 38 H 0.077 0.923 39 H 0.089 0.911 40 H 0.080 0.920 41 H 0.142 0.858 42 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.088 -1.953 0.625 2.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.145 4.145 3 Si 0.547 3.453 4 C -0.334 4.334 5 C -0.135 4.135 6 C -0.150 4.150 7 C -0.266 4.266 8 C 0.011 3.989 9 C -0.130 4.130 10 C -0.097 4.097 11 C -0.141 4.141 12 C 0.349 3.651 13 O -0.410 6.410 14 N -0.368 5.368 15 C 0.019 3.981 16 H 0.138 0.862 17 C -0.176 4.176 18 C -0.164 4.164 19 H 0.124 0.876 20 C 0.018 3.982 21 F -0.197 7.197 22 C -0.182 4.182 23 C -0.067 4.067 24 C -0.139 4.139 25 S 0.402 5.598 26 H 0.226 0.774 27 H 0.146 0.854 28 H -0.164 1.164 29 H -0.157 1.157 30 H 0.163 0.837 31 H 0.162 0.838 32 H 0.152 0.848 33 H 0.147 0.853 34 H 0.237 0.763 35 H 0.100 0.900 36 H 0.108 0.892 37 H 0.093 0.907 38 H 0.095 0.905 39 H 0.108 0.892 40 H 0.098 0.902 41 H 0.160 0.840 42 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.109 0.687 0.638 0.944 hybrid contribution -1.909 -2.083 -0.133 2.829 sum -2.018 -1.396 0.505 2.505 Atomic orbital electron populations 1.86629 1.17172 1.79912 1.49279 1.24377 0.83838 1.10054 0.96252 0.95218 0.91855 0.75169 0.83049 1.25042 1.07064 0.99072 1.02268 1.20005 1.01204 0.94855 0.97389 1.20392 0.98674 1.00527 0.95357 1.23090 1.05980 0.98023 0.99458 1.18296 0.95222 0.94090 0.91253 1.20869 1.00301 0.96351 0.95450 1.20955 0.95426 0.98117 0.95190 1.20017 1.02127 0.95612 0.96322 1.18258 0.80207 0.82517 0.84164 1.90809 1.42238 1.42225 1.65746 1.45902 1.53416 1.13418 1.24084 1.22538 0.96021 0.97459 0.82111 0.86220 1.23345 1.03155 0.95826 0.95273 1.23004 1.00271 0.96310 0.96828 0.87567 1.21944 0.92477 0.81265 1.02544 1.92787 1.76604 1.52276 1.98050 1.23465 0.98658 0.98628 0.97436 1.20952 0.95956 0.96274 0.93545 1.20982 0.97960 0.98760 0.96178 1.84173 1.48646 1.12454 1.14550 0.77398 0.85423 1.16383 1.15710 0.83653 0.83764 0.84808 0.85257 0.76334 0.90010 0.89226 0.90720 0.90472 0.89235 0.90168 0.84044 0.85122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.26 12.86 -35.23 -0.45 -0.71 16 2 C -0.03 0.03 2.96 36.01 0.11 0.13 16 3 Si 0.65 -0.69 30.96 -169.99 -5.26 -5.95 16 4 C -0.22 0.07 5.73 -35.88 -0.21 -0.13 16 5 C -0.10 0.03 10.00 -41.32 -0.41 -0.38 16 6 C -0.12 0.07 9.64 -40.90 -0.39 -0.33 16 7 C -0.15 -0.02 6.37 -36.94 -0.24 -0.25 16 8 C 0.01 0.00 5.88 -104.91 -0.62 -0.62 16 9 C -0.11 0.14 9.48 -39.59 -0.38 -0.24 16 10 C -0.08 0.12 9.48 -39.59 -0.38 -0.25 16 11 C -0.14 -0.09 5.88 -104.90 -0.62 -0.71 16 12 C 0.56 1.10 7.76 -12.46 -0.10 1.01 16 13 O -0.53 -3.05 15.93 5.28 0.08 -2.97 16 14 N -0.72 0.72 5.30 -54.05 -0.29 0.43 16 15 C 0.12 -0.12 4.24 -67.12 -0.28 -0.41 16 16 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 17 C -0.14 0.29 7.26 -25.92 -0.19 0.10 16 18 C -0.14 0.32 4.13 -89.81 -0.37 -0.05 16 19 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 20 C 0.07 -0.14 7.40 37.15 0.28 0.13 16 21 F -0.22 -0.34 17.22 2.25 0.04 -0.30 16 22 C -0.14 0.30 7.43 -25.92 -0.19 0.11 16 23 C -0.05 -0.05 9.53 -39.59 -0.38 -0.43 16 24 C -0.12 -0.03 9.54 -39.59 -0.38 -0.41 16 25 S 0.13 -0.05 19.46 -107.50 -2.09 -2.14 16 26 H 0.38 -0.84 8.70 45.56 0.40 -0.44 16 27 H 0.13 -0.22 7.96 -51.93 -0.41 -0.63 16 28 H -0.24 -0.18 7.11 56.52 0.40 0.22 16 29 H -0.23 -0.38 7.11 56.52 0.40 0.03 16 30 H 0.15 -0.16 8.06 -52.49 -0.42 -0.58 16 31 H 0.14 -0.36 6.88 -52.49 -0.36 -0.72 16 32 H 0.13 -0.44 6.74 -52.49 -0.35 -0.79 16 33 H 0.13 -0.58 6.38 -52.49 -0.33 -0.92 16 34 H 0.40 -1.47 6.74 -40.82 -0.28 -1.74 16 35 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 36 H 0.09 -0.27 8.08 -51.93 -0.42 -0.69 16 37 H 0.07 -0.25 7.94 -51.93 -0.41 -0.66 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.09 -0.26 7.96 -51.93 -0.41 -0.68 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.14 0.15 7.64 -52.48 -0.40 -0.25 16 42 H 0.13 -0.12 7.26 -52.48 -0.38 -0.50 16 LS Contribution 369.02 15.07 5.56 5.56 Total: 0.00 -7.64 369.02 -12.22 -19.85 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -5.07 Total: -11.05 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -4.74 Total: -2.72 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -0.29 Total: 0.43 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.37 Total: -3.68 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.04 Total: -0.30 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.26 Total: -5.95 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -2.09 Total: -2.14 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -7.64 -12.22 -19.85 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13308390.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.847 kcal (2) G-P(sol) polarization free energy of solvation -7.636 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.484 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.217 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.853 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds