Wall clock time and date at job start Tue Mar 9 2021 13:10:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86301 * 109.47213 * 2 1 4 4 C 1.50703 * 109.47185 * 119.99908 * 2 1 3 5 5 C 1.38505 * 119.80440 * 244.99757 * 4 2 1 6 6 C 1.37832 * 120.29799 * 180.02562 * 5 4 2 7 7 C 1.39662 * 119.91062 * 359.97438 * 6 5 4 8 8 C 1.47535 * 120.19616 * 180.02562 * 7 6 5 9 9 O 1.21588 * 120.00219 * 180.02562 * 8 7 6 10 10 N 1.34778 * 119.99536 * 0.02562 * 8 7 6 11 11 C 1.46502 * 119.99671 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.90669 * 336.24268 * 11 10 8 13 13 C 1.53778 * 113.61780 * 107.50275 * 11 10 8 14 14 C 1.53778 * 87.08449 * 139.97851 * 13 11 10 15 15 H 1.09000 * 113.61263 * 89.11673 * 14 13 11 16 16 C 1.52997 * 113.61422 * 220.01977 * 14 13 11 17 17 F 1.39907 * 109.46970 * 277.49645 * 16 14 13 18 18 C 1.53784 * 87.08081 * 334.56700 * 14 13 11 19 19 C 1.40180 * 119.61737 * 0.27683 * 7 6 5 20 20 O 1.35649 * 120.15292 * 179.70686 * 19 7 6 21 21 C 1.38098 * 119.80552 * 65.02113 * 4 2 1 22 22 H 0.96701 * 113.99682 * 300.00246 * 1 2 3 23 23 H 1.09001 * 109.47223 * 239.99809 * 2 1 3 24 24 H 1.48500 * 110.00032 * 299.99950 * 3 2 1 25 25 H 1.48499 * 110.00314 * 61.32206 * 3 2 1 26 26 H 1.07999 * 119.85211 * 0.02562 * 5 4 2 27 27 H 1.08000 * 120.04525 * 179.97438 * 6 5 4 28 28 H 0.97000 * 120.00419 * 359.97438 * 10 8 7 29 29 H 1.08999 * 113.61111 * 254.52914 * 13 11 10 30 30 H 1.08999 * 113.61280 * 25.34297 * 13 11 10 31 31 H 1.09002 * 109.47398 * 37.49618 * 16 14 13 32 32 H 1.08997 * 109.47284 * 157.49561 * 16 14 13 33 33 H 1.09004 * 113.61451 * 270.88641 * 18 14 13 34 34 H 1.08994 * 113.61477 * 139.97943 * 18 14 13 35 35 H 0.96694 * 114.00173 * 90.00021 * 20 19 7 36 36 H 1.07998 * 119.95430 * 0.02562 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6397 -0.0070 2.1905 6 6 3.1043 -0.6466 3.3196 7 6 2.8599 -2.0101 3.4979 8 6 3.3538 -2.7010 4.7043 9 8 3.1395 -3.8882 4.8556 10 7 4.0427 -2.0160 5.6385 11 6 4.5337 -2.7021 6.8362 12 1 3.9656 -3.6019 7.0725 13 6 6.0566 -2.9153 6.8434 14 6 6.0198 -2.5633 8.3399 15 1 5.8582 -3.4252 8.9873 16 6 7.1912 -1.6895 8.7929 17 9 8.3068 -2.4968 9.0401 18 6 4.7378 -1.7683 8.0409 19 6 2.1471 -2.7196 2.5214 20 8 1.9088 -4.0455 2.6806 21 6 1.6830 -2.0590 1.3939 22 1 -0.3933 0.4417 0.7651 23 1 1.7923 -0.5139 -0.8900 24 1 1.5615 2.4679 -1.2085 25 1 1.5879 2.4586 1.2242 26 1 2.8288 1.0475 2.0539 27 1 3.6566 -0.0942 4.0654 28 1 4.2140 -1.0689 5.5176 29 1 6.3543 -3.9448 6.6441 30 1 6.6015 -2.1921 6.2366 31 1 7.4304 -0.9686 8.0112 32 1 6.9173 -1.1590 9.7049 33 1 4.9224 -0.7307 7.7627 34 1 3.9709 -1.8719 8.8085 35 1 1.0834 -4.2439 3.1436 36 1 1.1306 -2.6008 0.6405 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13422076.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:07 Heat of formation + Delta-G solvation = -105.438276 kcal Electronic energy + Delta-G solvation = -21659.083765 eV Core-core repulsion = 18025.258258 eV Total energy + Delta-G solvation = -3633.825507 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.52752 -41.74623 -40.62899 -39.21068 -38.37795 -37.25990 -34.78836 -32.75905 -31.15950 -29.54204 -27.52880 -26.89766 -24.37354 -24.00754 -22.88180 -21.58855 -20.98561 -19.43750 -18.69715 -18.34592 -17.75659 -17.14314 -16.84093 -16.75390 -16.60720 -16.33821 -16.06529 -15.92798 -15.59566 -15.40342 -15.17298 -14.91195 -14.33000 -13.80084 -13.70137 -13.64141 -13.23991 -13.05764 -12.94342 -12.60491 -12.43472 -12.13789 -12.09937 -11.67080 -11.64244 -11.36587 -10.88656 -10.66676 -10.22562 -10.06274 -9.84002 -5.08475 -0.45709 0.05565 1.12063 1.45545 1.71277 1.84608 2.02291 2.52792 3.03602 3.20551 3.24981 3.26797 3.37295 3.46215 3.57432 3.61651 3.70282 3.91632 3.96428 4.04513 4.10704 4.15858 4.31007 4.46125 4.47398 4.52499 4.58643 4.64496 4.73091 4.83376 4.91071 4.94132 5.05882 5.14743 5.15912 5.44137 5.48585 6.24581 6.40062 6.67250 7.17589 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.691 3.309 4 C -0.074 4.074 5 C -0.137 4.137 6 C -0.065 4.065 7 C -0.165 4.165 8 C 0.559 3.441 9 O -0.517 6.517 10 N -0.719 5.719 11 C 0.125 3.875 12 H 0.119 0.881 13 C -0.147 4.147 14 C -0.144 4.144 15 H 0.107 0.893 16 C 0.074 3.926 17 F -0.216 7.216 18 C -0.137 4.137 19 C 0.173 3.827 20 O -0.476 6.476 21 C -0.129 4.129 22 H 0.377 0.623 23 H 0.123 0.877 24 H -0.255 1.255 25 H -0.258 1.258 26 H 0.136 0.864 27 H 0.133 0.867 28 H 0.399 0.601 29 H 0.078 0.922 30 H 0.088 0.912 31 H 0.075 0.925 32 H 0.077 0.923 33 H 0.090 0.910 34 H 0.082 0.918 35 H 0.398 0.602 36 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.263 5.931 1.353 6.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.191 4.191 3 Si 0.592 3.408 4 C -0.074 4.074 5 C -0.155 4.155 6 C -0.084 4.084 7 C -0.168 4.168 8 C 0.347 3.653 9 O -0.392 6.392 10 N -0.371 5.371 11 C 0.020 3.980 12 H 0.137 0.863 13 C -0.185 4.185 14 C -0.163 4.163 15 H 0.125 0.875 16 C 0.019 3.981 17 F -0.197 7.197 18 C -0.176 4.176 19 C 0.126 3.874 20 O -0.287 6.287 21 C -0.147 4.147 22 H 0.225 0.775 23 H 0.141 0.859 24 H -0.180 1.180 25 H -0.183 1.183 26 H 0.154 0.846 27 H 0.151 0.849 28 H 0.235 0.765 29 H 0.097 0.903 30 H 0.107 0.893 31 H 0.093 0.907 32 H 0.095 0.905 33 H 0.109 0.891 34 H 0.101 0.899 35 H 0.257 0.743 36 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.521 5.485 0.628 5.545 hybrid contribution -1.308 0.269 0.746 1.529 sum -0.787 5.754 1.373 5.968 Atomic orbital electron populations 1.86638 1.17301 1.79970 1.49324 1.25163 0.84268 1.11409 0.98254 0.94860 0.91538 0.73984 0.80435 1.20381 0.96761 0.94113 0.96194 1.20997 0.99902 1.00247 0.94353 1.21132 0.97381 0.92554 0.97306 1.20437 1.05634 0.94391 0.96376 1.18092 0.77987 0.86701 0.82535 1.90838 1.56502 1.14524 1.77379 1.45895 1.56924 1.13060 1.21232 1.22499 0.94580 0.97132 0.83750 0.86291 1.23549 0.96457 1.03435 0.95085 1.23011 0.95123 1.00227 0.97982 0.87475 1.21962 0.82266 0.91779 1.02134 1.92792 1.54981 1.75980 1.95977 1.23335 0.97250 0.99109 0.97878 1.18515 0.93728 0.83472 0.91638 1.84762 1.46176 1.17863 1.79927 1.21363 1.00922 0.93892 0.98547 0.77543 0.85916 1.17975 1.18306 0.84636 0.84889 0.76499 0.90319 0.89336 0.90682 0.90520 0.89123 0.89922 0.74347 0.84171 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.03 12.83 -35.23 -0.45 -0.42 16 2 C -0.08 0.13 2.79 36.01 0.10 0.23 16 3 Si 0.69 -1.72 29.86 -169.99 -5.08 -6.79 16 4 C -0.07 0.09 5.35 -104.57 -0.56 -0.47 16 5 C -0.14 0.32 8.64 -39.63 -0.34 -0.02 16 6 C -0.06 0.14 9.54 -39.20 -0.37 -0.23 16 7 C -0.16 -0.11 5.89 -104.85 -0.62 -0.73 16 8 C 0.56 1.13 7.76 -12.47 -0.10 1.03 16 9 O -0.52 -3.01 14.76 -16.59 -0.24 -3.25 16 10 N -0.72 0.90 5.31 -54.05 -0.29 0.62 16 11 C 0.13 -0.15 4.24 -67.12 -0.28 -0.43 16 12 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 13 C -0.15 0.17 7.43 -25.92 -0.19 -0.02 16 14 C -0.14 0.32 4.10 -89.81 -0.37 -0.05 16 15 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 16 C 0.07 -0.14 7.35 37.16 0.27 0.13 16 17 F -0.22 -0.44 17.36 2.25 0.04 -0.40 16 18 C -0.14 0.48 7.39 -25.91 -0.19 0.29 16 19 C 0.17 0.27 6.72 -38.69 -0.26 0.01 16 20 O -0.48 -1.25 11.58 -40.52 -0.47 -1.72 16 21 C -0.13 -0.03 9.60 -39.47 -0.38 -0.41 16 22 H 0.38 -1.15 8.70 45.56 0.40 -0.75 16 23 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 24 H -0.25 -0.29 7.11 56.52 0.40 0.12 16 25 H -0.26 0.26 7.00 56.52 0.40 0.65 16 26 H 0.14 -0.58 4.81 -52.49 -0.25 -0.83 16 27 H 0.13 -0.70 6.40 -52.49 -0.34 -1.04 16 28 H 0.40 -1.67 6.76 -40.82 -0.28 -1.94 16 29 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.09 -0.16 7.97 -51.93 -0.41 -0.58 16 31 H 0.07 -0.25 7.95 -51.93 -0.41 -0.67 16 32 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 33 H 0.09 -0.45 8.08 -51.93 -0.42 -0.87 16 34 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 35 H 0.40 -0.41 9.06 45.56 0.41 0.00 16 36 H 0.14 0.00 8.06 -52.49 -0.42 -0.42 16 LS Contribution 308.38 15.07 4.65 4.65 Total: 0.00 -9.16 308.38 -8.55 -17.72 By element: Atomic # 1 Polarization: -6.29 SS G_CDS: -3.42 Total: -9.71 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -3.29 Total: -0.69 kcal Atomic # 7 Polarization: 0.90 SS G_CDS: -0.29 Total: 0.62 kcal Atomic # 8 Polarization: -4.23 SS G_CDS: -1.17 Total: -5.39 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.08 Total: -6.79 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -9.16 -8.55 -17.72 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13422076.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.722 kcal (2) G-P(sol) polarization free energy of solvation -9.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.716 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.438 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds