Wall clock time and date at job start Tue Mar 9 2021 13:10:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37782 * 119.85001 * 2 1 4 4 C 1.39710 * 119.90733 * 180.02562 * 3 2 1 5 5 C 1.47540 * 120.19271 * 179.97438 * 4 3 2 6 6 O 1.21584 * 120.00433 * 180.02562 * 5 4 3 7 7 N 1.34779 * 119.99974 * 359.97438 * 5 4 3 8 8 C 1.46498 * 120.00276 * 180.02562 * 7 5 4 9 9 H 1.09004 * 112.84846 * 23.80508 * 8 7 5 10 10 C 1.53774 * 113.61758 * 155.00337 * 8 7 5 11 11 C 1.53777 * 87.08392 * 139.98302 * 10 8 7 12 12 H 1.08991 * 113.61810 * 89.20063 * 11 10 8 13 13 C 1.53006 * 113.61157 * 220.01875 * 11 10 8 14 14 F 1.39900 * 109.46764 * 183.46699 * 13 11 10 15 15 C 1.53778 * 87.17138 * 334.60908 * 11 10 8 16 16 C 1.40130 * 119.61742 * 0.25427 * 4 3 2 17 17 O 1.35656 * 120.15505 * 179.72548 * 16 4 3 18 18 C 1.38709 * 119.70160 * 359.51399 * 16 4 3 19 19 C 1.50697 * 119.96304 * 180.20832 * 18 16 4 20 20 O 1.42900 * 109.46871 * 75.27888 * 19 18 16 21 21 Si 1.86301 * 109.47325 * 195.27944 * 19 18 16 22 22 C 1.38060 * 120.08152 * 0.48889 * 18 16 4 23 23 H 1.08997 * 109.46883 * 89.99608 * 1 2 3 24 24 H 1.08998 * 109.46818 * 210.00152 * 1 2 3 25 25 H 1.08999 * 109.46633 * 330.00143 * 1 2 3 26 26 H 1.08009 * 120.05101 * 0.02562 * 3 2 1 27 27 H 0.97001 * 120.00058 * 0.02562 * 7 5 4 28 28 H 1.09006 * 113.61590 * 25.42784 * 10 8 7 29 29 H 1.09004 * 113.69065 * 254.54399 * 10 8 7 30 30 H 1.08993 * 109.46955 * 303.47064 * 13 11 10 31 31 H 1.09000 * 109.47050 * 63.46892 * 13 11 10 32 32 H 1.08995 * 113.61847 * 139.94049 * 15 11 10 33 33 H 1.09000 * 113.61531 * 270.84408 * 15 11 10 34 34 H 0.96697 * 114.00287 * 89.99267 * 17 16 4 35 35 H 1.09002 * 109.47105 * 315.27802 * 19 18 16 36 36 H 0.96703 * 113.99591 * 179.97438 * 20 19 18 37 37 H 1.48498 * 110.00222 * 300.00177 * 21 19 18 38 38 H 1.48501 * 109.99939 * 61.31832 * 21 19 18 39 39 H 1.08001 * 119.80944 * 179.76320 * 22 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5899 1.1964 -0.0005 5 6 4.3307 2.4724 -0.0011 6 8 5.5465 2.4696 -0.0021 7 7 3.6595 3.6412 -0.0016 8 6 4.3949 4.9082 -0.0028 9 1 5.4021 4.8127 -0.4085 10 6 3.5996 6.0817 -0.5986 11 6 4.1899 6.9498 0.5250 12 1 5.1407 7.4145 0.2641 13 6 3.1893 7.9402 1.1242 14 9 3.8343 8.7354 2.0776 15 6 4.3403 5.6558 1.3420 16 6 4.2837 -0.0211 -0.0065 17 8 5.6402 -0.0324 -0.0127 18 6 3.5771 -1.2147 -0.0016 19 6 4.3173 -2.5274 -0.0032 20 8 4.8554 -2.7724 1.2978 21 14 3.1442 -3.9012 -0.4587 22 6 2.1966 -1.2017 -0.0010 23 1 -0.3633 0.0001 -1.0277 24 1 -0.3633 -0.8900 0.5139 25 1 -0.3632 0.8900 0.5138 26 1 1.6512 2.1295 0.0004 27 1 2.6895 3.6435 -0.0013 28 1 2.5189 5.9557 -0.5312 29 1 3.9302 6.3736 -1.5955 30 1 2.7879 8.5742 0.3337 31 1 2.3754 7.3921 1.5989 32 1 5.2692 5.6033 1.9098 33 1 3.4626 5.4131 1.9410 34 1 6.0375 -0.0376 0.8689 35 1 5.1284 -2.4863 -0.7301 36 1 5.3458 -3.6027 1.3706 37 1 2.0336 -3.9678 0.5248 38 1 2.6020 -3.6748 -1.8225 39 1 1.6509 -2.1337 -0.0010 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_13422088.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:09 Heat of formation + Delta-G solvation = -109.941139 kcal Electronic energy + Delta-G solvation = -23826.463501 eV Core-core repulsion = 20036.905117 eV Total energy + Delta-G solvation = -3789.558385 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -48.52788 -41.79367 -40.66978 -39.10703 -38.02619 -37.55565 -34.79865 -33.26770 -32.77290 -29.45495 -27.71785 -26.90052 -26.79544 -25.53628 -23.25307 -21.91811 -21.48742 -20.80055 -19.48657 -18.50213 -18.21575 -17.92555 -17.26010 -16.87781 -16.83959 -16.71574 -16.13793 -15.90050 -15.68339 -15.52776 -15.13994 -14.99175 -14.69501 -14.68275 -14.29011 -13.79206 -13.68241 -13.60367 -13.25614 -13.07309 -12.94899 -12.66898 -12.56851 -12.48767 -12.12848 -11.98842 -11.67432 -11.63471 -11.36110 -10.76227 -10.34680 -10.23243 -10.03258 -9.57093 -5.05556 -0.38360 0.00549 1.19233 1.55478 1.72549 1.86513 2.04933 2.51567 3.16895 3.20278 3.22853 3.27946 3.43464 3.52695 3.54214 3.65869 3.76332 3.93983 3.97482 4.03079 4.05891 4.09575 4.22287 4.37803 4.46628 4.48174 4.48631 4.52128 4.59355 4.66838 4.74750 4.84506 4.87086 4.89879 4.93393 5.11230 5.17917 5.24507 5.45388 5.52048 6.42145 6.55238 6.74924 7.20156 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.562 3.438 6 O -0.515 6.515 7 N -0.719 5.719 8 C 0.125 3.875 9 H 0.120 0.880 10 C -0.138 4.138 11 C -0.144 4.144 12 H 0.108 0.892 13 C 0.073 3.927 14 F -0.216 7.216 15 C -0.146 4.146 16 C 0.193 3.807 17 O -0.472 6.472 18 C -0.106 4.106 19 C -0.068 4.068 20 O -0.547 6.547 21 Si 0.687 3.313 22 C -0.081 4.081 23 H 0.076 0.924 24 H 0.070 0.930 25 H 0.073 0.927 26 H 0.132 0.868 27 H 0.399 0.601 28 H 0.090 0.910 29 H 0.083 0.917 30 H 0.077 0.923 31 H 0.075 0.925 32 H 0.078 0.922 33 H 0.087 0.913 34 H 0.400 0.600 35 H 0.081 0.919 36 H 0.384 0.616 37 H -0.249 1.249 38 H -0.253 1.253 39 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.337 -2.655 -0.813 5.150 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.349 3.651 6 O -0.391 6.391 7 N -0.371 5.371 8 C 0.021 3.979 9 H 0.138 0.862 10 C -0.176 4.176 11 C -0.163 4.163 12 H 0.126 0.874 13 C 0.018 3.982 14 F -0.197 7.197 15 C -0.185 4.185 16 C 0.145 3.855 17 O -0.283 6.283 18 C -0.107 4.107 19 C -0.179 4.179 20 O -0.354 6.354 21 Si 0.588 3.412 22 C -0.099 4.099 23 H 0.095 0.905 24 H 0.089 0.911 25 H 0.092 0.908 26 H 0.150 0.850 27 H 0.234 0.766 28 H 0.108 0.892 29 H 0.101 0.899 30 H 0.095 0.905 31 H 0.093 0.907 32 H 0.097 0.903 33 H 0.106 0.894 34 H 0.259 0.741 35 H 0.099 0.901 36 H 0.232 0.768 37 H -0.174 1.174 38 H -0.178 1.178 39 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -4.585 -2.274 -1.506 5.335 hybrid contribution -0.259 0.626 0.496 0.839 sum -4.844 -1.649 -1.010 5.215 Atomic orbital electron populations 1.20836 0.89955 1.03527 1.02996 1.19766 0.96819 0.92176 1.00987 1.21105 0.92151 0.98167 0.97170 1.20378 0.93912 0.93496 1.08974 1.18029 0.87329 0.83335 0.76397 1.90832 1.12971 1.87236 1.48066 1.45887 1.10011 1.05308 1.75925 1.22530 0.97718 0.80857 0.96844 0.86245 1.23333 1.00581 0.94731 0.98966 1.23014 1.00660 0.95031 0.97598 0.87426 1.21973 0.94269 0.92010 0.89904 1.92789 1.83921 1.76081 1.66955 1.23591 1.03563 0.94285 0.97087 1.18171 0.84068 0.89578 0.93642 1.84665 1.13966 1.95857 1.33841 1.19667 0.93239 0.93859 1.03915 1.24598 1.04069 1.00094 0.89111 1.86444 1.74595 1.45555 1.28757 0.95082 0.80223 0.85934 0.79929 1.21017 0.92988 0.98156 0.97770 0.90550 0.91132 0.90829 0.84982 0.76554 0.89167 0.89868 0.90493 0.90701 0.90305 0.89405 0.74058 0.90147 0.76775 1.17441 1.17794 0.85304 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.24 10.00 36.01 0.36 0.60 16 2 C -0.10 -0.04 5.87 -104.67 -0.61 -0.65 16 3 C -0.07 0.00 9.18 -39.20 -0.36 -0.36 16 4 C -0.16 -0.42 5.89 -104.85 -0.62 -1.04 16 5 C 0.56 1.86 7.76 -12.47 -0.10 1.76 16 6 O -0.52 -3.52 14.76 -16.58 -0.24 -3.77 16 7 N -0.72 0.11 5.31 -53.97 -0.29 -0.18 16 8 C 0.13 -0.05 4.24 -67.03 -0.28 -0.33 16 9 H 0.12 0.18 7.46 -51.93 -0.39 -0.21 16 10 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 11 C -0.14 0.24 4.09 -89.81 -0.37 -0.12 16 12 H 0.11 -0.14 8.14 -51.93 -0.42 -0.56 16 13 C 0.07 -0.11 7.38 37.16 0.27 0.16 16 14 F -0.22 -0.51 17.36 2.25 0.04 -0.47 16 15 C -0.15 0.11 7.45 -25.83 -0.19 -0.08 16 16 C 0.19 0.70 6.69 -38.70 -0.26 0.44 16 17 O -0.47 -1.93 10.90 -40.54 -0.44 -2.37 16 18 C -0.11 -0.28 5.30 -104.51 -0.55 -0.83 16 19 C -0.07 -0.03 2.37 36.00 0.09 0.06 16 20 O -0.55 -0.01 12.86 -35.23 -0.45 -0.46 16 21 Si 0.69 -0.82 30.19 -169.99 -5.13 -5.96 16 22 C -0.08 -0.14 8.30 -39.53 -0.33 -0.47 16 23 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 24 H 0.07 -0.15 8.08 -51.93 -0.42 -0.57 16 25 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 26 H 0.13 -0.42 6.40 -52.48 -0.34 -0.76 16 27 H 0.40 -1.16 6.76 -40.82 -0.28 -1.44 16 28 H 0.09 -0.38 8.08 -51.93 -0.42 -0.80 16 29 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 30 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 31 H 0.07 -0.22 7.87 -51.93 -0.41 -0.62 16 32 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.09 -0.12 7.92 -51.93 -0.41 -0.54 16 34 H 0.40 0.58 9.06 45.56 0.41 1.00 16 35 H 0.08 0.01 7.82 -51.93 -0.41 -0.40 16 36 H 0.38 -1.86 8.74 45.56 0.40 -1.46 16 37 H -0.25 -0.28 6.74 56.52 0.38 0.11 16 38 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 39 H 0.13 0.12 4.87 -52.49 -0.26 -0.13 16 LS Contribution 329.00 15.07 4.96 4.96 Total: 0.00 -9.28 329.00 -8.97 -18.25 By element: Atomic # 1 Polarization: -5.05 SS G_CDS: -4.26 Total: -9.31 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: -3.15 Total: -0.69 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.29 Total: -0.18 kcal Atomic # 8 Polarization: -5.46 SS G_CDS: -1.14 Total: -6.60 kcal Atomic # 9 Polarization: -0.51 SS G_CDS: 0.04 Total: -0.47 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.13 Total: -5.96 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -9.28 -8.97 -18.25 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_13422088.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.690 kcal (2) G-P(sol) polarization free energy of solvation -9.284 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.974 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.251 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds