Wall clock time and date at job start Tue Mar 9 2021 13:10:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86299 * 109.47631 * 2 1 4 4 C 1.50706 * 109.47150 * 120.00358 * 2 1 3 5 5 C 1.31115 * 118.54125 * 249.99598 * 4 2 1 6 6 N 1.38930 * 121.84506 * 180.12309 * 5 4 2 7 7 C 1.47036 * 118.88400 * 346.94263 * 6 5 4 8 8 C 1.50696 * 109.82242 * 163.20051 * 7 6 5 9 9 O 1.21280 * 120.00015 * 340.00727 * 8 7 6 10 10 N 1.34776 * 120.00096 * 160.00052 * 8 7 6 11 11 C 1.46491 * 120.00139 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85073 * 336.19021 * 11 10 8 13 13 C 1.53785 * 113.61805 * 107.50335 * 11 10 8 14 14 C 1.53780 * 87.08161 * 139.97922 * 13 11 10 15 15 H 1.09004 * 113.68790 * 89.13122 * 14 13 11 16 16 C 1.52994 * 113.61527 * 220.01845 * 14 13 11 17 17 F 1.39907 * 109.47290 * 277.49730 * 16 14 13 18 18 C 1.53780 * 87.08294 * 334.57055 * 14 13 11 19 19 C 1.53542 * 107.65369 * 43.66309 * 7 6 5 20 20 C 1.50196 * 118.54786 * 70.20821 * 4 2 1 21 21 H 0.96702 * 114.00308 * 60.00015 * 1 2 3 22 22 H 1.09001 * 109.47166 * 240.00019 * 2 1 3 23 23 H 1.48506 * 109.99842 * 298.68191 * 3 2 1 24 24 H 1.48502 * 109.99887 * 59.99849 * 3 2 1 25 25 H 1.08002 * 119.08189 * 0.40812 * 5 4 2 26 26 H 0.96998 * 120.55664 * 166.96894 * 6 5 4 27 27 H 1.08996 * 109.82254 * 284.12499 * 7 6 5 28 28 H 0.96999 * 119.99778 * 0.02562 * 10 8 7 29 29 H 1.09001 * 113.60911 * 254.52709 * 13 11 10 30 30 H 1.08998 * 113.61224 * 25.42806 * 13 11 10 31 31 H 1.09000 * 109.47268 * 37.49437 * 16 14 13 32 32 H 1.08995 * 109.47551 * 157.49818 * 16 14 13 33 33 H 1.09007 * 113.60756 * 270.88178 * 18 14 13 34 34 H 1.08993 * 113.61511 * 139.98339 * 18 14 13 35 35 H 1.09002 * 109.62588 * 58.77691 * 19 7 6 36 36 H 1.09001 * 109.62004 * 179.14380 * 19 7 6 37 37 H 1.09009 * 109.45018 * 39.79976 * 20 4 2 38 38 H 1.09003 * 109.00511 * 280.27197 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 2.5116 -0.0029 2.1694 6 7 3.0020 -0.5874 3.3304 7 6 2.6166 -1.9707 3.6467 8 6 3.5516 -2.5373 4.6839 9 8 4.6399 -2.0318 4.8600 10 7 3.1784 -3.6056 5.4158 11 6 4.0871 -4.1561 6.4244 12 1 5.1326 -3.9203 6.2260 13 6 3.6517 -3.8650 7.8704 14 6 4.0944 -5.2982 8.2089 15 1 5.1420 -5.3757 8.5002 16 6 3.1537 -6.0176 9.1776 17 9 3.4611 -5.6438 10.4903 18 6 3.8386 -5.6422 6.7321 19 6 2.7175 -2.7898 2.3519 20 6 1.7494 -2.1984 1.3247 21 1 -0.3934 0.4417 -0.7650 22 1 1.7923 -0.5138 -0.8900 23 1 1.5880 2.4585 -1.2243 24 1 1.5616 2.4679 1.2085 25 1 2.6070 1.0649 2.0387 26 1 3.5884 -0.0912 3.9227 27 1 1.5926 -1.9931 4.0194 28 1 2.3082 -4.0101 5.2747 29 1 4.2495 -3.0962 8.3599 30 1 2.5794 -3.7020 7.9790 31 1 2.1228 -5.7435 8.9539 32 1 3.2750 -7.0953 9.0690 33 1 2.8173 -5.9651 6.5297 34 1 4.5871 -6.3080 6.3028 35 1 3.7357 -2.7406 1.9659 36 1 2.4523 -3.8276 2.5537 37 1 1.9374 -2.6495 0.3503 38 1 0.7249 -2.4122 1.6296 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_15413834.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:25 Heat of formation + Delta-G solvation = -74.273977 kcal Electronic energy + Delta-G solvation = -20841.714583 eV Core-core repulsion = 17407.873786 eV Total energy + Delta-G solvation = -3433.840798 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.137 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.54942 -41.58333 -40.23378 -39.00727 -37.42191 -34.89367 -33.30154 -32.97545 -29.64876 -27.49152 -26.93487 -25.40358 -24.15043 -23.17378 -21.74217 -20.96961 -19.09545 -19.05831 -18.35069 -17.79043 -17.47320 -17.11137 -16.84866 -16.47516 -16.09835 -15.68794 -15.57201 -15.37890 -15.00467 -14.65816 -14.37242 -14.20308 -13.76444 -13.72331 -13.65091 -13.51385 -13.01618 -12.89617 -12.64420 -12.38922 -12.15034 -11.75120 -11.68832 -11.65412 -11.40496 -11.24953 -10.80065 -10.23607 -10.18939 -8.44343 -4.89556 1.32040 1.40510 1.47470 1.63128 1.82741 2.00914 2.60801 3.16746 3.23010 3.38070 3.48788 3.56215 3.63146 3.70596 3.89259 3.92314 4.00747 4.02462 4.07959 4.19986 4.38440 4.43332 4.44844 4.53935 4.56663 4.62715 4.69210 4.74016 4.79198 4.88528 4.96437 5.09865 5.20375 5.29677 5.37425 5.56481 6.21453 6.37599 6.60734 6.83464 7.03905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.050 4.050 3 Si 0.667 3.333 4 C -0.234 4.234 5 C 0.142 3.858 6 N -0.731 5.731 7 C 0.135 3.865 8 C 0.514 3.486 9 O -0.529 6.529 10 N -0.717 5.717 11 C 0.123 3.877 12 H 0.119 0.881 13 C -0.146 4.146 14 C -0.144 4.144 15 H 0.107 0.893 16 C 0.073 3.927 17 F -0.216 7.216 18 C -0.137 4.137 19 C -0.126 4.126 20 C -0.052 4.052 21 H 0.373 0.627 22 H 0.066 0.934 23 H -0.265 1.265 24 H -0.259 1.259 25 H 0.134 0.866 26 H 0.409 0.591 27 H 0.090 0.910 28 H 0.403 0.597 29 H 0.078 0.922 30 H 0.088 0.912 31 H 0.075 0.925 32 H 0.077 0.923 33 H 0.091 0.909 34 H 0.083 0.917 35 H 0.078 0.922 36 H 0.078 0.922 37 H 0.074 0.926 38 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.749 -3.298 -1.794 3.828 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.161 4.161 3 Si 0.570 3.430 4 C -0.244 4.244 5 C 0.021 3.979 6 N -0.364 5.364 7 C 0.026 3.974 8 C 0.300 3.700 9 O -0.404 6.404 10 N -0.368 5.368 11 C 0.019 3.981 12 H 0.137 0.863 13 C -0.185 4.185 14 C -0.164 4.164 15 H 0.125 0.875 16 C 0.018 3.982 17 F -0.197 7.197 18 C -0.175 4.175 19 C -0.165 4.165 20 C -0.090 4.090 21 H 0.220 0.780 22 H 0.084 0.916 23 H -0.190 1.190 24 H -0.185 1.185 25 H 0.151 0.849 26 H 0.246 0.754 27 H 0.107 0.893 28 H 0.238 0.762 29 H 0.096 0.904 30 H 0.107 0.893 31 H 0.093 0.907 32 H 0.095 0.905 33 H 0.110 0.890 34 H 0.101 0.899 35 H 0.097 0.903 36 H 0.097 0.903 37 H 0.093 0.907 38 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -0.109 -2.505 -1.066 2.725 hybrid contribution -1.374 -0.100 -0.314 1.413 sum -1.483 -2.605 -1.380 3.300 Atomic orbital electron populations 1.86617 1.18941 1.79910 1.49352 1.24555 0.83591 1.09342 0.98623 0.95336 0.92122 0.75781 0.79754 1.19918 1.12163 0.95405 0.96874 1.20399 0.95464 0.96229 0.85803 1.44242 1.55261 1.12346 1.24530 1.21012 0.97293 0.84498 0.94604 1.20659 0.87735 0.80349 0.81304 1.90737 1.22360 1.59476 1.67816 1.45931 1.20365 1.31953 1.38531 1.22526 0.95877 0.93186 0.86550 0.86307 1.23545 1.02295 0.96673 0.95980 1.23011 1.01436 0.97008 0.94897 0.87471 1.21966 0.99099 1.00005 0.77109 1.92792 1.94803 1.93387 1.38758 1.23331 1.03272 0.96221 0.94712 1.21878 1.01940 0.98561 0.94094 1.19955 0.98584 0.91660 0.98762 0.77999 0.91562 1.19007 1.18456 0.84879 0.75367 0.89260 0.76170 0.90364 0.89324 0.90678 0.90470 0.89022 0.89867 0.90299 0.90301 0.90729 0.91416 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.95 12.86 -35.23 -0.45 -1.40 16 2 C -0.05 -0.02 2.80 36.01 0.10 0.08 16 3 Si 0.67 -0.16 29.92 -169.99 -5.09 -5.25 16 4 C -0.23 -0.24 5.40 -101.34 -0.55 -0.79 16 5 C 0.14 0.11 9.61 -16.08 -0.15 -0.04 16 6 N -0.73 -0.47 5.46 -55.34 -0.30 -0.77 16 7 C 0.14 -0.08 3.36 -68.51 -0.23 -0.31 16 8 C 0.51 0.22 7.08 -10.99 -0.08 0.14 16 9 O -0.53 -2.26 15.70 5.56 0.09 -2.17 16 10 N -0.72 1.61 5.35 -53.02 -0.28 1.33 16 11 C 0.12 -0.22 4.24 -67.12 -0.28 -0.51 16 12 H 0.12 0.01 7.46 -51.93 -0.39 -0.38 16 13 C -0.15 0.25 7.43 -25.92 -0.19 0.06 16 14 C -0.14 0.36 4.10 -89.81 -0.37 -0.01 16 15 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 16 C 0.07 -0.15 7.35 37.15 0.27 0.12 16 17 F -0.22 -0.41 17.36 2.25 0.04 -0.37 16 18 C -0.14 0.52 7.39 -25.92 -0.19 0.33 16 19 C -0.13 0.14 5.47 -26.43 -0.14 0.00 16 20 C -0.05 0.00 5.85 -28.11 -0.16 -0.16 16 21 H 0.37 -0.71 8.74 45.56 0.40 -0.32 16 22 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 23 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 24 H -0.26 -0.68 6.88 56.52 0.39 -0.29 16 25 H 0.13 -0.03 4.34 -52.49 -0.23 -0.26 16 26 H 0.41 0.27 8.12 -40.82 -0.33 -0.06 16 27 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.40 -1.97 8.73 -40.82 -0.36 -2.33 16 29 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.09 -0.20 7.96 -51.93 -0.41 -0.61 16 31 H 0.07 -0.26 7.94 -51.93 -0.41 -0.67 16 32 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.09 -0.47 8.08 -51.92 -0.42 -0.89 16 34 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 35 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 36 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 37 H 0.07 -0.03 8.14 -51.92 -0.42 -0.45 16 38 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 313.34 15.07 4.72 4.72 Total: 0.00 -7.58 313.34 -8.84 -16.41 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -5.58 Total: -11.40 kcal Atomic # 6 Polarization: 0.88 SS G_CDS: -1.98 Total: -1.10 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -0.59 Total: 0.56 kcal Atomic # 8 Polarization: -3.21 SS G_CDS: -0.37 Total: -3.57 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.09 Total: -5.25 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -7.58 -8.84 -16.41 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_15413834.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.860 kcal (2) G-P(sol) polarization free energy of solvation -7.577 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.437 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.837 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.414 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds