Wall clock time and date at job start Tue Mar 9 2021 13:10:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86299 * 109.47631 * 2 1 4 4 C 1.50706 * 109.47150 * 120.00358 * 2 1 3 5 5 C 1.31115 * 118.54125 * 249.99598 * 4 2 1 6 6 N 1.38930 * 121.84506 * 180.12309 * 5 4 2 7 7 C 1.47036 * 118.88400 * 346.94263 * 6 5 4 8 8 C 1.50696 * 109.82242 * 163.20051 * 7 6 5 9 9 O 1.21280 * 120.00015 * 340.00727 * 8 7 6 10 10 N 1.34776 * 120.00096 * 160.00052 * 8 7 6 11 11 C 1.46491 * 120.00139 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85073 * 336.19021 * 11 10 8 13 13 C 1.53785 * 113.61805 * 107.50335 * 11 10 8 14 14 C 1.53780 * 87.08161 * 139.97922 * 13 11 10 15 15 H 1.09004 * 113.68790 * 89.13122 * 14 13 11 16 16 C 1.52994 * 113.61527 * 220.01845 * 14 13 11 17 17 F 1.39907 * 109.47290 * 277.49730 * 16 14 13 18 18 C 1.53780 * 87.08294 * 334.57055 * 14 13 11 19 19 C 1.53542 * 107.65369 * 43.66309 * 7 6 5 20 20 C 1.50196 * 118.54786 * 70.20821 * 4 2 1 21 21 H 0.96702 * 114.00308 * 60.00015 * 1 2 3 22 22 H 1.09001 * 109.47166 * 240.00019 * 2 1 3 23 23 H 1.48506 * 109.99842 * 298.68191 * 3 2 1 24 24 H 1.48502 * 109.99887 * 59.99849 * 3 2 1 25 25 H 1.08002 * 119.08189 * 0.40812 * 5 4 2 26 26 H 0.96998 * 120.55664 * 166.96894 * 6 5 4 27 27 H 1.08996 * 109.82254 * 284.12499 * 7 6 5 28 28 H 0.96999 * 119.99778 * 0.02562 * 10 8 7 29 29 H 1.09001 * 113.60911 * 254.52709 * 13 11 10 30 30 H 1.08998 * 113.61224 * 25.42806 * 13 11 10 31 31 H 1.09000 * 109.47268 * 37.49437 * 16 14 13 32 32 H 1.08995 * 109.47551 * 157.49818 * 16 14 13 33 33 H 1.09007 * 113.60756 * 270.88178 * 18 14 13 34 34 H 1.08993 * 113.61511 * 139.98339 * 18 14 13 35 35 H 1.09002 * 109.62588 * 58.77691 * 19 7 6 36 36 H 1.09001 * 109.62004 * 179.14380 * 19 7 6 37 37 H 1.09009 * 109.45018 * 39.79976 * 20 4 2 38 38 H 1.09003 * 109.00511 * 280.27197 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 2.5116 -0.0029 2.1694 6 7 3.0020 -0.5874 3.3304 7 6 2.6166 -1.9707 3.6467 8 6 3.5516 -2.5373 4.6839 9 8 4.6399 -2.0318 4.8600 10 7 3.1784 -3.6056 5.4158 11 6 4.0871 -4.1561 6.4244 12 1 5.1326 -3.9203 6.2260 13 6 3.6517 -3.8650 7.8704 14 6 4.0944 -5.2982 8.2089 15 1 5.1420 -5.3757 8.5002 16 6 3.1537 -6.0176 9.1776 17 9 3.4611 -5.6438 10.4903 18 6 3.8386 -5.6422 6.7321 19 6 2.7175 -2.7898 2.3519 20 6 1.7494 -2.1984 1.3247 21 1 -0.3934 0.4417 -0.7650 22 1 1.7923 -0.5138 -0.8900 23 1 1.5880 2.4585 -1.2243 24 1 1.5616 2.4679 1.2085 25 1 2.6070 1.0649 2.0387 26 1 3.5884 -0.0912 3.9227 27 1 1.5926 -1.9931 4.0194 28 1 2.3082 -4.0101 5.2747 29 1 4.2495 -3.0962 8.3599 30 1 2.5794 -3.7020 7.9790 31 1 2.1228 -5.7435 8.9539 32 1 3.2750 -7.0953 9.0690 33 1 2.8173 -5.9651 6.5297 34 1 4.5871 -6.3080 6.3028 35 1 3.7357 -2.7406 1.9659 36 1 2.4523 -3.8276 2.5537 37 1 1.9374 -2.6495 0.3503 38 1 0.7249 -2.4122 1.6296 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_15413834.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:25 Heat of formation + Delta-G solvation = -74.740283 kcal Electronic energy + Delta-G solvation = -20841.734804 eV Core-core repulsion = 17407.873786 eV Total energy + Delta-G solvation = -3433.861018 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 271.137 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -48.54262 -41.56104 -40.14387 -39.01729 -37.47337 -34.87293 -33.31037 -32.94095 -29.51509 -27.46617 -26.73119 -25.40773 -24.07198 -23.09567 -21.71405 -20.81232 -19.08859 -19.03194 -18.40181 -17.74322 -17.44867 -16.99659 -16.75469 -16.46454 -16.07784 -15.65907 -15.56592 -15.37227 -14.97148 -14.71507 -14.35035 -14.16008 -13.83527 -13.67344 -13.50834 -13.45427 -12.93672 -12.86914 -12.50604 -12.42743 -12.01167 -11.76389 -11.70347 -11.51411 -11.27258 -11.25138 -10.83576 -10.26284 -10.11911 -8.46685 -4.90442 1.29975 1.38704 1.44813 1.58288 1.89826 1.95412 2.63002 3.35898 3.41767 3.48967 3.61943 3.68252 3.75794 3.77823 3.92585 4.05878 4.12187 4.22301 4.24450 4.28606 4.46874 4.58776 4.61024 4.65252 4.69630 4.77817 4.79904 4.81732 4.98631 5.02089 5.04844 5.23140 5.25296 5.30051 5.51773 5.57717 6.25412 6.45615 6.70571 6.80636 7.10367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.057 4.057 3 Si 0.739 3.261 4 C -0.247 4.247 5 C 0.135 3.865 6 N -0.737 5.737 7 C 0.136 3.864 8 C 0.515 3.485 9 O -0.573 6.573 10 N -0.700 5.700 11 C 0.118 3.882 12 H 0.095 0.905 13 C -0.148 4.148 14 C -0.143 4.143 15 H 0.097 0.903 16 C 0.066 3.934 17 F -0.242 7.242 18 C -0.118 4.118 19 C -0.119 4.119 20 C -0.052 4.052 21 H 0.387 0.613 22 H 0.082 0.918 23 H -0.293 1.293 24 H -0.301 1.301 25 H 0.137 0.863 26 H 0.407 0.593 27 H 0.105 0.895 28 H 0.419 0.581 29 H 0.057 0.943 30 H 0.098 0.902 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.115 0.885 34 H 0.088 0.912 35 H 0.065 0.935 36 H 0.103 0.897 37 H 0.079 0.921 38 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.641 -4.737 -2.274 5.505 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.167 4.167 3 Si 0.647 3.353 4 C -0.257 4.257 5 C 0.014 3.986 6 N -0.370 5.370 7 C 0.027 3.973 8 C 0.301 3.699 9 O -0.452 6.452 10 N -0.352 5.352 11 C 0.013 3.987 12 H 0.114 0.886 13 C -0.187 4.187 14 C -0.162 4.162 15 H 0.116 0.884 16 C 0.011 3.989 17 F -0.223 7.223 18 C -0.156 4.156 19 C -0.158 4.158 20 C -0.089 4.089 21 H 0.236 0.764 22 H 0.100 0.900 23 H -0.221 1.221 24 H -0.229 1.229 25 H 0.154 0.846 26 H 0.243 0.757 27 H 0.122 0.878 28 H 0.257 0.743 29 H 0.075 0.925 30 H 0.117 0.883 31 H 0.111 0.889 32 H 0.112 0.888 33 H 0.134 0.866 34 H 0.107 0.893 35 H 0.083 0.917 36 H 0.121 0.879 37 H 0.098 0.902 38 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -1.026 -3.989 -1.555 4.402 hybrid contribution -1.131 0.381 -0.148 1.203 sum -2.157 -3.608 -1.703 4.536 Atomic orbital electron populations 1.86571 1.19637 1.80337 1.50554 1.24697 0.83158 1.09758 0.99115 0.94510 0.91056 0.73922 0.75797 1.20160 1.12252 0.96234 0.97074 1.20509 0.95629 0.96512 0.85962 1.44353 1.55225 1.12952 1.24456 1.21125 0.97536 0.83947 0.94678 1.20858 0.87163 0.80486 0.81416 1.90721 1.24264 1.60979 1.69269 1.45820 1.20898 1.30958 1.37494 1.22479 0.94861 0.94953 0.86451 0.88644 1.23567 1.02512 0.96743 0.95868 1.22950 1.00943 0.96412 0.95888 0.88440 1.22242 1.00025 1.01051 0.75582 1.92740 1.95052 1.93688 1.40811 1.23274 1.04813 0.94475 0.93059 1.21848 1.00912 0.99707 0.93317 1.19966 0.98584 0.91026 0.99320 0.76398 0.90029 1.22111 1.22927 0.84616 0.75685 0.87778 0.74263 0.92460 0.88339 0.88905 0.88805 0.86637 0.89337 0.91652 0.87906 0.90235 0.91678 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.85 12.86 -148.98 -1.92 -3.77 16 2 C -0.06 -0.04 2.80 71.24 0.20 0.16 16 3 Si 0.74 0.04 29.92 68.60 2.05 2.09 16 4 C -0.25 -0.49 5.40 -16.76 -0.09 -0.59 16 5 C 0.13 0.29 9.61 83.41 0.80 1.09 16 6 N -0.74 -1.45 5.46 -328.99 -1.80 -3.25 16 7 C 0.14 -0.19 3.36 44.32 0.15 -0.04 16 8 C 0.51 0.59 7.08 87.66 0.62 1.21 16 9 O -0.57 -5.77 15.70 -3.03 -0.05 -5.81 16 10 N -0.70 3.60 5.35 -440.05 -2.36 1.25 16 11 C 0.12 -0.42 4.24 45.52 0.19 -0.23 16 12 H 0.10 0.16 7.46 -2.39 -0.02 0.14 16 13 C -0.15 0.46 7.43 31.12 0.23 0.69 16 14 C -0.14 0.75 4.10 -10.27 -0.04 0.70 16 15 H 0.10 -0.32 8.14 -2.38 -0.02 -0.34 16 16 C 0.07 -0.33 7.35 71.98 0.53 0.20 16 17 F -0.24 -0.98 17.36 44.97 0.78 -0.20 16 18 C -0.12 1.06 7.39 31.12 0.23 1.29 16 19 C -0.12 0.36 5.47 30.79 0.17 0.52 16 20 C -0.05 0.04 5.85 29.70 0.17 0.21 16 21 H 0.39 -1.54 8.74 -74.06 -0.65 -2.19 16 22 H 0.08 -0.20 7.96 -2.39 -0.02 -0.22 16 23 H -0.29 -1.39 7.11 99.48 0.71 -0.68 16 24 H -0.30 -2.07 6.88 99.48 0.68 -1.38 16 25 H 0.14 0.08 4.34 -2.91 -0.01 0.07 16 26 H 0.41 1.10 8.12 -92.71 -0.75 0.35 16 27 H 0.10 -0.45 8.14 -2.39 -0.02 -0.47 16 28 H 0.42 -4.90 8.73 -92.71 -0.81 -5.70 16 29 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 30 H 0.10 -0.51 7.96 -2.39 -0.02 -0.52 16 31 H 0.09 -0.80 7.94 -2.39 -0.02 -0.82 16 32 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 33 H 0.12 -1.55 8.08 -2.38 -0.02 -1.57 16 34 H 0.09 -0.82 8.14 -2.39 -0.02 -0.83 16 35 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 36 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 37 H 0.08 -0.14 8.14 -2.38 -0.02 -0.16 16 38 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 Total: 0.00 -19.19 313.34 -1.22 -20.41 By element: Atomic # 1 Polarization: -14.85 SS G_CDS: -1.10 Total: -15.95 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: 3.16 Total: 5.23 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -4.15 Total: -2.00 kcal Atomic # 8 Polarization: -7.62 SS G_CDS: -1.96 Total: -9.58 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 0.78 Total: -0.20 kcal Atomic # 14 Polarization: 0.04 SS G_CDS: 2.05 Total: 2.09 kcal Total: -19.19 -1.22 -20.41 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_15413834.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.328 kcal (2) G-P(sol) polarization free energy of solvation -19.193 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.219 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.412 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.740 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds