Wall clock time and date at job start Tue Mar 9 2021 13:10:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47349 * 2 1 4 4 C 1.50703 * 109.47055 * 240.00160 * 2 1 3 5 5 C 1.34494 * 125.49334 * 150.02649 * 4 2 1 6 6 C 1.46751 * 106.36563 * 179.97438 * 5 4 2 7 7 C 1.47263 * 126.97212 * 179.97438 * 6 5 4 8 8 O 1.21628 * 119.99894 * 180.02562 * 7 6 5 9 9 N 1.34774 * 119.99864 * 0.02562 * 7 6 5 10 10 C 1.46494 * 120.00086 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85301 * 334.66505 * 10 9 7 12 12 C 1.53787 * 113.61520 * 105.86216 * 10 9 7 13 13 C 1.53956 * 87.01938 * 139.95478 * 12 10 9 14 14 H 1.08997 * 113.54275 * 89.18771 * 13 12 10 15 15 C 1.53001 * 113.74177 * 220.05801 * 13 12 10 16 16 F 1.39903 * 109.47008 * 277.59705 * 15 13 12 17 17 C 1.53785 * 87.11133 * 334.63446 * 13 12 10 18 18 C 1.36338 * 106.06263 * 359.97438 * 6 5 4 19 19 C 1.50998 * 126.79503 * 180.02562 * 18 6 5 20 20 C 1.53390 * 108.25296 * 164.34390 * 19 18 6 21 21 C 1.53154 * 109.05087 * 48.45932 * 20 19 18 22 22 C 1.53134 * 109.52347 * 290.42586 * 21 20 19 23 23 N 1.35213 * 108.65915 * 359.76908 * 18 6 5 24 24 H 0.96708 * 114.00101 * 59.99198 * 1 2 3 25 25 H 1.09002 * 109.46984 * 120.00249 * 2 1 3 26 26 H 1.48497 * 110.00028 * 298.68295 * 3 2 1 27 27 H 1.48501 * 109.99652 * 59.99990 * 3 2 1 28 28 H 1.07994 * 126.81723 * 0.02562 * 5 4 2 29 29 H 0.97002 * 119.99856 * 359.97438 * 9 7 6 30 30 H 1.09001 * 113.61143 * 254.52663 * 12 10 9 31 31 H 1.08995 * 113.61313 * 25.42798 * 12 10 9 32 32 H 1.09007 * 109.47367 * 37.59375 * 15 13 12 33 33 H 1.08999 * 109.47144 * 157.59271 * 15 13 12 34 34 H 1.09000 * 113.61485 * 270.81656 * 17 13 12 35 35 H 1.09005 * 113.68927 * 139.92235 * 17 13 12 36 36 H 1.09002 * 109.70500 * 284.03268 * 19 18 6 37 37 H 1.09000 * 109.70399 * 44.65015 * 19 18 6 38 38 H 1.09006 * 109.54409 * 168.33250 * 20 19 18 39 39 H 1.09005 * 109.54169 * 288.58500 * 20 19 18 40 40 H 1.08993 * 109.46043 * 50.44057 * 21 20 19 41 41 H 1.09003 * 109.46215 * 170.41348 * 21 20 19 42 42 H 1.08999 * 109.56772 * 170.83211 * 22 21 20 43 43 H 1.09000 * 109.56395 * 291.06444 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 3.0859 -0.4466 -1.8678 6 6 3.1556 -1.3781 -2.9997 7 6 4.2337 -1.4801 -3.9976 8 8 4.1608 -2.3038 -4.8895 9 7 5.3011 -0.6607 -3.9226 10 6 6.3734 -0.7618 -4.9157 11 1 6.4392 -1.7512 -5.3683 12 6 6.3747 0.3855 -5.9398 13 6 7.9100 0.3788 -5.8250 14 1 8.3961 -0.2981 -6.5275 15 6 8.5332 1.7761 -5.8184 16 9 8.6617 2.2357 -7.1335 17 6 7.7247 -0.2197 -4.4206 18 6 2.0199 -2.1299 -2.9400 19 6 1.6165 -3.2357 -3.8858 20 6 0.4945 -4.0471 -3.2257 21 6 -0.5703 -3.0848 -2.6911 22 6 -0.0061 -2.3093 -1.4972 23 7 1.2913 -1.7292 -1.8737 24 1 -0.3934 0.4418 -0.7650 25 1 1.7923 -0.5139 0.8900 26 1 1.5879 2.4586 -1.2242 27 1 1.5615 2.4678 1.2085 28 1 3.8170 0.3015 -1.5994 29 1 5.3590 -0.0035 -3.2115 30 1 6.0083 0.0928 -6.9238 31 1 5.9131 1.3011 -5.5703 32 1 7.8934 2.4568 -5.2565 33 1 9.5169 1.7330 -5.3507 34 1 7.6329 0.5303 -3.6350 35 1 8.4460 -1.0002 -4.1785 36 1 1.2582 -2.8065 -4.8215 37 1 2.4719 -3.8824 -4.0812 38 1 0.0461 -4.7148 -3.9614 39 1 0.9037 -4.6322 -2.4021 40 1 -0.8548 -2.3851 -3.4769 41 1 -1.4461 -3.6515 -2.3750 42 1 -0.6977 -1.5142 -1.2187 43 1 0.1305 -2.9863 -0.6539 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_16915396.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:30 Heat of formation + Delta-G solvation = -58.661188 kcal Electronic energy + Delta-G solvation = -25976.360564 eV Core-core repulsion = 22131.206888 eV Total energy + Delta-G solvation = -3845.153676 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.153 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -48.45428 -42.78176 -40.79531 -39.00994 -38.15786 -36.95076 -34.41586 -33.44716 -31.21082 -29.97827 -28.93450 -26.77408 -26.61915 -24.71977 -24.60106 -22.73739 -21.81374 -21.15800 -20.68522 -19.56759 -18.87793 -17.53855 -17.41324 -16.95163 -16.76221 -16.71201 -16.56938 -16.25095 -15.76472 -15.60913 -15.48570 -15.36823 -15.11664 -15.06392 -14.59145 -14.46753 -14.24830 -13.86176 -13.55049 -13.40960 -13.28814 -12.85602 -12.82162 -12.50515 -12.35698 -12.18071 -12.08824 -11.98870 -11.87779 -11.81751 -11.54143 -11.24597 -10.94157 -10.61758 -9.90325 -9.54217 -9.00853 -5.06795 0.84812 0.97335 1.39850 1.56620 1.71327 1.96103 2.47659 2.69550 3.02799 3.33033 3.40668 3.40997 3.49449 3.60452 3.62411 3.73501 3.76346 3.79435 4.02612 4.13985 4.14677 4.21559 4.25481 4.33593 4.36410 4.39956 4.53689 4.57631 4.61322 4.65875 4.70137 4.71873 4.79055 4.83646 4.89829 4.97569 5.03063 5.05855 5.14258 5.17376 5.32536 5.67170 5.75338 6.00543 6.19417 6.21134 6.75276 7.52393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.051 4.051 3 Si 0.711 3.289 4 C -0.013 4.013 5 C -0.162 4.162 6 C -0.236 4.236 7 C 0.595 3.405 8 O -0.549 6.549 9 N -0.718 5.718 10 C 0.128 3.872 11 H 0.116 0.884 12 C -0.147 4.147 13 C -0.145 4.145 14 H 0.105 0.895 15 C 0.073 3.927 16 F -0.217 7.217 17 C -0.137 4.137 18 C 0.121 3.879 19 C -0.056 4.056 20 C -0.129 4.129 21 C -0.139 4.139 22 C 0.099 3.901 23 N -0.428 5.428 24 H 0.376 0.624 25 H 0.121 0.879 26 H -0.257 1.257 27 H -0.255 1.255 28 H 0.153 0.847 29 H 0.401 0.599 30 H 0.076 0.924 31 H 0.087 0.913 32 H 0.075 0.925 33 H 0.076 0.924 34 H 0.091 0.909 35 H 0.081 0.919 36 H 0.088 0.912 37 H 0.100 0.900 38 H 0.080 0.920 39 H 0.069 0.931 40 H 0.074 0.926 41 H 0.088 0.912 42 H 0.103 0.897 43 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.207 0.929 3.902 4.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.160 4.160 3 Si 0.610 3.390 4 C -0.121 4.121 5 C -0.186 4.186 6 C -0.245 4.245 7 C 0.385 3.615 8 O -0.428 6.428 9 N -0.369 5.369 10 C 0.022 3.978 11 H 0.134 0.866 12 C -0.185 4.185 13 C -0.164 4.164 14 H 0.124 0.876 15 C 0.018 3.982 16 F -0.198 7.198 17 C -0.175 4.175 18 C 0.003 3.997 19 C -0.093 4.093 20 C -0.167 4.167 21 C -0.177 4.177 22 C -0.022 4.022 23 N -0.104 5.104 24 H 0.225 0.775 25 H 0.139 0.861 26 H -0.181 1.181 27 H -0.179 1.179 28 H 0.170 0.830 29 H 0.235 0.765 30 H 0.095 0.905 31 H 0.106 0.894 32 H 0.093 0.907 33 H 0.094 0.906 34 H 0.109 0.891 35 H 0.100 0.900 36 H 0.106 0.894 37 H 0.119 0.881 38 H 0.098 0.902 39 H 0.087 0.913 40 H 0.093 0.907 41 H 0.107 0.893 42 H 0.121 0.879 43 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.312 0.747 3.941 4.023 hybrid contribution -1.016 0.146 -0.120 1.034 sum -1.328 0.893 3.821 4.143 Atomic orbital electron populations 1.86590 1.18070 1.79527 1.49749 1.24834 0.83448 1.11169 0.96555 0.94575 0.91299 0.72510 0.80608 1.20642 0.96415 0.95481 0.99600 1.21627 0.97786 1.02582 0.96604 1.19839 0.98025 1.05011 1.01635 1.17344 0.80885 0.79879 0.83409 1.90766 1.79056 1.36990 1.35968 1.45715 1.20822 1.38778 1.31550 1.22415 0.85680 1.00023 0.89633 0.86569 1.23578 0.94631 0.99583 1.00744 1.23041 0.97238 0.97116 0.99016 0.87649 1.21972 1.02158 0.94519 0.79519 1.92785 1.97480 1.90324 1.39260 1.23320 0.97076 1.00837 0.96295 1.20405 0.91320 0.97706 0.90258 1.20519 0.99440 0.93575 0.95812 1.21728 0.95841 0.97915 1.01208 1.21940 0.99278 0.99010 0.97430 1.22283 0.82565 0.98980 0.98341 1.43872 1.17500 1.27138 1.21881 0.77530 0.86144 1.18074 1.17911 0.82998 0.76468 0.90540 0.89424 0.90671 0.90562 0.89080 0.90039 0.89384 0.88126 0.90172 0.91272 0.90733 0.89311 0.87909 0.89906 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.38 10.28 -35.23 -0.36 0.02 16 2 C -0.05 0.07 3.00 36.01 0.11 0.18 16 3 Si 0.71 -1.59 31.11 -169.99 -5.29 -6.88 16 4 C -0.01 0.00 6.15 -81.87 -0.50 -0.50 16 5 C -0.16 0.03 9.09 -37.47 -0.34 -0.31 16 6 C -0.24 -0.55 6.28 -103.48 -0.65 -1.20 16 7 C 0.60 1.92 7.81 -12.59 -0.10 1.82 16 8 O -0.55 -3.54 14.96 5.25 0.08 -3.46 16 9 N -0.72 0.02 5.36 -54.14 -0.29 -0.27 16 10 C 0.13 -0.04 4.21 -67.12 -0.28 -0.32 16 11 H 0.12 0.17 7.50 -51.93 -0.39 -0.22 16 12 C -0.15 0.07 7.45 -25.82 -0.19 -0.12 16 13 C -0.14 0.23 4.09 -89.71 -0.37 -0.14 16 14 H 0.11 -0.12 8.14 -51.93 -0.42 -0.55 16 15 C 0.07 -0.11 7.35 37.16 0.27 0.17 16 16 F -0.22 -0.54 17.36 2.25 0.04 -0.50 16 17 C -0.14 0.38 7.39 -25.91 -0.19 0.18 16 18 C 0.12 0.26 6.57 -81.64 -0.54 -0.27 16 19 C -0.06 -0.07 5.32 -27.54 -0.15 -0.22 16 20 C -0.13 0.11 5.98 -26.45 -0.16 -0.04 16 21 C -0.14 0.25 5.92 -26.58 -0.16 0.10 16 22 C 0.10 -0.11 6.21 -3.68 -0.02 -0.13 16 23 N -0.43 -0.33 3.11 -107.36 -0.33 -0.67 16 24 H 0.38 -1.11 8.27 45.56 0.38 -0.74 16 25 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 26 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 27 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 28 H 0.15 -0.55 6.52 -52.49 -0.34 -0.90 16 29 H 0.40 -1.08 7.84 -40.82 -0.32 -1.40 16 30 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 31 H 0.09 -0.09 7.98 -51.93 -0.41 -0.50 16 32 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 33 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.09 -0.39 8.07 -51.93 -0.42 -0.81 16 35 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 36 H 0.09 0.14 8.14 -51.93 -0.42 -0.29 16 37 H 0.10 0.26 7.40 -51.93 -0.38 -0.13 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 -0.04 8.12 -51.93 -0.42 -0.46 16 40 H 0.07 -0.11 8.11 -51.93 -0.42 -0.53 16 41 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 42 H 0.10 -0.20 5.68 -51.93 -0.29 -0.49 16 43 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 345.76 15.07 5.21 5.21 Total: 0.00 -7.95 345.76 -10.65 -18.60 By element: Atomic # 1 Polarization: -4.81 SS G_CDS: -6.44 Total: -11.24 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -3.27 Total: -0.81 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -0.62 Total: -0.94 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.28 Total: -3.44 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.29 Total: -6.88 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -7.95 -10.65 -18.60 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_16915396.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.060 kcal (2) G-P(sol) polarization free energy of solvation -7.952 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.012 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.649 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.661 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds